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Normalized Counts Table (ENSG00000104450.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr8	100157905	100158034	FALSE	LOW_COUNTS_INDEP_FILTER	7.9	0.0235	0.002175	NA	NA	NA	4.9	5.2	3.0	15.9	6.9	11.6
E002	chr8	100158034	100158118	TRUE	OK	15.4	0.0137	0.02305	0.5132	0.823	0.411	13.8	7.3	15.1	23.8	13.7	18.4
E003	chr8	100158334	100158427	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E004	chr8	100158427	100158616	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.151	0.5496	NA	NA	NA	0.0	2.1	2.0	0.0	1.0	1.0
E005	chr8	100162278	100162420	TRUE	OK	13.7	0.0114	0.008149	0.3634	0.979	0.490	10.8	11.5	8.1	20.8	14.7	16.4
E006	chr8	100165813	100165973	TRUE	OK	42.4	0.0148	0.006534	0.3308	0.724	0.362	49.3	32.3	23.2	52.6	46.0	51.2
E007	chr8	100177815	100177941	TRUE	OK	43.2	0.0107	0.02459	0.5227	0.552	0.276	47.3	39.6	27.2	44.7	47.0	53.2
E008	chr8	100183374	100183436	TRUE	OK	45.8	0.01	0.008844	0.375	0.637	0.319	42.4	34.4	40.3	49.6	43.1	64.8
E009	chr8	100183955	100184062	TRUE	OK	66.6	0.0112	0.3192	0.7973	0.233	0.116	73.0	54.2	70.5	74.5	49.0	78.3
E010	chr8	100184627	100184733	TRUE	OK	61.3	0.0197	0.9732	0.9935	-0.015	-0.007	71.0	45.9	80.6	68.5	41.1	60.9
E011	chr8	100187119	100187250	TRUE	OK	51.6	0.0139	0.7343	0.9309	0.093	0.047	58.2	40.7	61.4	63.5	35.3	50.3
E012	chr8	100191389	100191496	TRUE	OK	40.0	0.0123	0.2475	0.7748	0.313	0.157	31.6	40.7	43.3	50.6	29.4	44.5
E013	chr8	100194111	100194268	TRUE	OK	59.1	0.00385	0.5597	0.8746	0.107	0.054	62.1	65.7	55.4	60.6	53.9	57.0
E014	chr8	100194268	100194680	TRUE	OK	27.5	0.0567	0.6787	0.9131	0.127	0.064	14.8	43.8	26.2	21.8	26.4	31.9
E015	chr8	100194680	100194684	FALSE	LOW_COUNTS_INDEP_FILTER	4.2	0.168	0.5008	NA	NA	NA	2.0	8.3	1.0	2.0	5.9	5.8
E016	chr8	100213086	100213089	TRUE	OK	29.2	0.0277	0.3667	0.8125	-0.296	-0.148	38.5	37.5	26.2	33.8	26.4	12.6
E017	chr8	100213089	100213428	TRUE	OK	261.0	0.0176	0.08416	0.6823	-0.379	-0.190	353.0	275.3	300.2	269.0	224.3	144.1
E018	chr8	100213818	100213918	TRUE	OK	166.2	0.00448	0.3546	0.8089	-0.139	-0.069	200.2	154.3	200.4	165.8	145.9	130.5
E019	chr8	100220278	100220431	TRUE	OK	289.3	0.00502	0.5556	0.8734	0.073	0.036	337.2	253.4	317.3	279.0	280.1	268.8
E020	chr8	100225172	100225339	TRUE	OK	345.3	0.0131	0.9119	0.9792	0.011	0.005	410.2	293.0	400.9	308.8	293.8	365.5
E021	chr8	100231155	100231284	TRUE	OK	367.6	0.0142	0.6998	0.9198	-0.085	-0.043	450.6	323.2	433.1	341.5	274.2	382.9
E022	chr8	100231284	100231288	TRUE	OK	214.4	0.00927	0.4732	0.8472	-0.132	-0.066	259.3	197.1	257.8	204.5	155.7	211.7
E023	chr8	100233170	100233410	TRUE	OK	12.5	0.0147	0.09223	0.691	-0.678	-0.339	18.7	11.5	18.1	6.9	10.8	8.7
E024	chr8	100233410	100233537	TRUE	OK	323.4	0.00552	0.5813	0.8816	-0.081	-0.041	371.7	309.7	379.7	306.8	257.6	315.2
E025	chr8	100239239	100239404	TRUE	OK	321.9	0.00152	0.04885	0.6224	-0.188	-0.094	388.5	344.1	354.5	316.7	257.6	269.7
E026	chr8	100240402	100240515	TRUE	OK	322.6	0.00272	0.08644	0.6854	-0.190	-0.095	378.6	377.5	334.4	317.7	278.1	249.4
E027	chr8	100240515	100240558	TRUE	OK	274.7	0.00471	0.06937	0.6616	-0.244	-0.122	327.4	329.5	286.1	278.0	230.1	197.2
E028	chr8	100240558	100240771	TRUE	OK	421.1	0.00253	0.0975	0.6965	-0.176	-0.088	509.8	466.1	439.1	390.2	383.9	337.4
E029	chr8	100240890	100241902	TRUE	OK	859.3	0.00894	0.03004	0.552	-0.359	-0.179	956.4	1108.4	910.5	785.3	670.8	724.2
E030	chr8	100241902	100241903	TRUE	OK	17.3	0.0166	0.1363	0.7274	0.519	0.259	21.7	8.3	16.1	22.8	19.6	15.5
E031	chr8	100259041	100259278	TRUE	OK	546.6	0.00823	8.197e-07	0.0007002	0.782	0.391	559.1	376.4	462.3	669.1	622.8	589.8
J032	chr8	100158118	100162278	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0349	0.09425	NA	NA	NA	1.0	2.1	3.0	5.0	2.0	5.8
J033	chr8	100158616	100162278	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J034	chr8	100162420	100165813	TRUE	OK	9.7	0.0124	0.008852	0.3752	1.120	0.560	6.9	8.3	5.0	9.9	14.7	13.5
J035	chr8	100165973	100177815	TRUE	OK	24.5	0.084	0.1547	0.7366	0.636	0.318	34.5	21.9	6.0	32.8	24.5	27.1
J036	chr8	100177941	100183374	TRUE	OK	31.9	0.0124	0.02594	0.5307	0.628	0.314	30.6	26.1	25.2	31.8	30.4	47.4
J037	chr8	100183436	100183955	TRUE	OK	33.9	0.0126	0.02405	0.5195	0.630	0.315	30.6	26.1	30.2	35.7	30.4	50.3
J038	chr8	100184062	100184627	TRUE	OK	46.1	0.00962	0.9547	0.9894	0.011	0.005	54.2	35.5	57.4	52.6	34.3	42.5
J039	chr8	100184733	100187119	TRUE	OK	37.3	0.0203	0.9586	0.9904	0.016	0.008	43.4	27.1	48.3	43.7	23.5	37.7
J040	chr8	100187250	100191389	TRUE	OK	23.9	0.0139	0.4706	0.8464	0.236	0.118	19.7	22.9	28.2	32.8	15.7	24.2
J041	chr8	100191496	100194111	TRUE	OK	23.2	0.0061	0.07967	0.6765	0.489	0.244	16.8	22.9	23.2	29.8	20.6	26.1
J042	chr8	100194268	100213089	TRUE	OK	25.5	0.0057	0.9125	0.9794	-0.034	-0.017	34.5	25.0	23.2	23.8	20.6	26.1
J043	chr8	100213428	100213818	TRUE	OK	102.6	0.00339	0.1788	0.7483	-0.209	-0.104	131.1	95.9	122.9	103.3	83.2	79.3
J044	chr8	100213428	100225172	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.047	0.3123	NA	NA	NA	7.9	2.1	5.0	1.0	3.9	2.9
J045	chr8	100213918	100220278	TRUE	OK	95.3	0.00247	0.224	0.7664	0.176	0.088	111.4	81.3	95.7	100.3	94.0	88.9
J046	chr8	100220431	100225172	TRUE	OK	186.1	0.00826	0.6096	0.8911	0.081	0.041	217.9	160.6	203.5	166.8	169.4	198.2
J047	chr8	100225339	100231155	TRUE	OK	185.7	0.0202	0.906	0.9776	-0.029	-0.014	226.8	155.4	218.6	166.8	134.2	212.7
J048	chr8	100231288	100233410	TRUE	OK	205.3	0.00856	0.4231	0.8308	-0.142	-0.071	246.5	190.8	248.8	196.6	147.9	201.1
J049	chr8	100233537	100239239	TRUE	OK	167.3	0.0046	0.7469	0.9345	-0.049	-0.025	187.3	160.6	196.4	158.8	132.2	168.2
J050	chr8	100239404	100240402	TRUE	OK	167.6	0.00254	0.04139	0.5988	-0.256	-0.128	193.3	205.4	180.3	162.8	142.0	121.8
J051	chr8	100240771	100240890	TRUE	OK	197.2	0.00345	0.5943	0.8861	-0.077	-0.038	242.6	188.7	215.5	173.7	179.2	183.7
J052	chr8	100240771	100259041	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.265	0.9402	NA	NA	NA	0.0	0.0	1.0	0.0	1.0	0.0
N053	chr8	100213428	100220278	TRUE	OK	24.8	0.0114	0.1258	0.7207	-0.458	-0.229	33.5	26.1	31.2	18.9	26.4	12.6
N054	chr8	100233537	100240402	TRUE	OK	19.2	0.00866	0.4018	0.8246	0.255	0.127	22.7	19.8	14.1	15.9	19.6	23.2
N055	chr8	100259246	100259853	TRUE	OK	300.1	0.0138	0.0001151	0.03428	0.786	0.393	298.8	181.4	264.9	361.4	373.1	321.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000104450.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE