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Normalized Counts Table (ENSG00000223959.8)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr16	89972585	89972588	FALSE	LOW_COUNTS_INDEP_FILTER	8.5	0.0478	0.5023	NA	NA	NA	12.8	10.4	7.1	6.0	11.8	2.9
E002	chr16	89972588	89972592	FALSE	LOW_COUNTS_INDEP_FILTER	9.2	0.0652	0.5384	NA	NA	NA	12.8	12.5	7.1	6.0	13.7	2.9
E003	chr16	89972592	89972593	FALSE	LOW_COUNTS_INDEP_FILTER	9.0	0.0753	0.6087	NA	NA	NA	12.8	12.5	6.0	6.0	13.7	2.9
E004	chr16	89972593	89972616	TRUE	OK	30.3	0.00868	0.2369	0.7712	-0.319	-0.160	30.6	45.9	31.2	20.8	30.4	23.2
E005	chr16	89972616	89972630	TRUE	OK	57.3	0.00409	0.8996	0.976	-0.026	-0.013	54.2	67.8	64.5	46.7	53.9	57.0
E006	chr16	89972630	89972647	TRUE	OK	82.2	0.00379	0.8887	0.9733	-0.026	-0.013	79.9	89.7	97.7	67.5	74.4	84.1
E007	chr16	89972647	89972765	TRUE	OK	139.4	0.00352	0.2759	0.7835	-0.160	-0.080	156.8	152.2	161.2	111.2	117.5	137.3
E008	chr16	89977604	89977638	TRUE	OK	13.6	0.0112	0.1548	0.7366	0.526	0.263	9.9	13.6	13.1	10.9	17.6	16.4
E009	chr16	89977638	89977677	TRUE	OK	94.3	0.00366	0.4248	0.8313	-0.125	-0.062	102.5	97.0	115.8	64.5	89.1	96.7
E010	chr16	89977677	89977693	TRUE	OK	116.2	0.00375	0.2063	0.7601	-0.194	-0.097	135.1	125.1	136.0	87.4	96.9	117.0
E011	chr16	89977693	89977802	TRUE	OK	160.4	0.00326	0.1287	0.7227	-0.212	-0.106	184.4	187.7	176.3	125.1	134.2	154.7
E012	chr16	89977802	89977955	TRUE	OK	18.0	0.0128	0.008459	0.3683	0.909	0.455	15.8	13.6	12.1	15.9	31.3	19.3
E013	chr16	89977955	89978517	TRUE	OK	38.7	0.00736	4.94e-05	0.01873	0.986	0.493	36.5	28.2	22.2	36.7	52.9	56.1
E014	chr16	89978809	89978878	TRUE	OK	128.6	0.00303	0.7476	0.9346	0.049	0.024	143.0	138.7	126.9	96.3	127.3	139.2
E015	chr16	89979301	89979714	TRUE	OK	36.2	0.00597	0.00866	0.3716	0.622	0.311	33.5	25.0	35.3	34.7	44.1	44.5
E016	chr16	89979714	89979870	TRUE	OK	35.9	0.00811	0.008334	0.3664	0.654	0.327	30.6	30.2	31.2	42.7	46.0	34.8
E017	chr16	89979870	89980241	TRUE	OK	52.7	0.00489	1.427e-05	0.007312	0.889	0.444	38.5	50.1	35.3	48.6	73.4	70.6
E018	chr16	89980241	89980244	TRUE	OK	106.9	0.00298	0.7243	0.9275	0.054	0.027	106.5	123.0	109.8	81.4	103.8	117.0
E019	chr16	89980244	89980336	TRUE	OK	174.9	0.00627	0.8138	0.9536	-0.049	-0.024	170.6	226.3	175.3	142.0	160.6	175.0
E020	chr16	89981772	89981886	TRUE	OK	213.4	0.00456	0.3285	0.8006	-0.150	-0.075	217.9	266.9	231.7	176.7	192.9	194.3
E021	chr16	89981886	89981918	TRUE	OK	167.9	0.0033	0.4574	0.842	-0.108	-0.054	174.5	198.1	185.3	142.0	160.6	147.0
E022	chr16	89981918	89981923	TRUE	OK	133.1	0.00552	0.4411	0.8366	-0.136	-0.068	145.9	149.1	151.1	119.1	117.5	116.0
E023	chr16	89984530	89984599	TRUE	OK	166.3	0.00293	0.1587	0.7384	-0.191	-0.095	193.3	182.5	189.4	133.0	153.7	146.0
E024	chr16	89984599	89984617	TRUE	OK	73.0	0.00516	0.1507	0.7351	-0.266	-0.133	90.7	71.9	91.7	49.6	64.6	69.6
E025	chr16	89984617	89984699	TRUE	OK	60.9	0.0131	0.2336	0.7705	-0.277	-0.139	74.9	56.3	81.6	31.8	62.7	58.0
E026	chr16	89984699	89984701	TRUE	OK	31.6	0.0266	0.9572	0.99	0.005	0.003	37.5	19.8	44.3	20.8	33.3	33.8
E027	chr16	89985445	89985570	TRUE	OK	49.9	0.00873	0.4829	0.8504	-0.153	-0.077	65.1	45.9	57.4	29.8	51.9	49.3
E028	chr16	89988495	89988681	TRUE	OK	45.9	0.00814	0.5783	0.8809	-0.117	-0.058	52.3	42.8	58.4	25.8	49.9	46.4
E029	chr16	89988681	89988851	TRUE	OK	39.5	0.0113	0.2452	0.774	-0.304	-0.152	43.4	37.5	58.4	24.8	32.3	40.6
E030	chr16	89988851	89988951	TRUE	OK	90.5	0.00588	0.8777	0.9705	-0.023	-0.012	106.5	87.6	99.7	65.5	82.3	101.5
E031	chr16	89990331	89990865	TRUE	OK	11.8	0.0145	0.9056	0.9775	0.048	0.024	14.8	8.3	14.1	8.9	12.7	11.6
E032	chr16	89990865	89991003	TRUE	OK	110.9	0.00384	0.7782	0.9439	0.047	0.024	123.3	106.4	122.9	84.4	124.4	104.4
E033	chr16	89991228	89991383	FALSE	LOW_COUNTS_INDEP_FILTER	5.2	0.0278	0.8313	NA	NA	NA	4.9	7.3	5.0	2.0	5.9	5.8
E034	chr16	89992720	89992828	TRUE	OK	96.5	0.0103	0.1307	0.7239	0.334	0.167	99.6	81.3	98.7	73.5	132.2	93.8
E035	chr16	89993767	89993893	TRUE	OK	121.3	0.0121	0.4535	0.8405	0.175	0.088	124.2	103.2	143.0	86.4	154.7	116.0
E036	chr16	89994692	89994758	TRUE	OK	24.8	0.015	0.7104	0.9231	-0.125	-0.062	24.7	27.1	31.2	24.8	15.7	25.1
E037	chr16	89994758	89996610	TRUE	OK	742.1	0.0025	0.151	0.7353	-0.149	-0.075	767.1	872.8	811.8	552.0	711.0	737.7
E038	chr16	89996610	89996623	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.132	0.7578	NA	NA	NA	3.0	16.7	4.0	6.0	4.9	3.9
E039	chr16	89996623	89996626	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.854	0.6485	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E040	chr16	89996782	89996892	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.822	0.6451	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	0.0
E041	chr16	89998605	89999195	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.298	0.5942	NA	NA	NA	2.0	2.1	0.0	2.0	0.0	0.0
E042	chr16	89999195	89999311	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.148	0.5615	NA	NA	NA	2.0	2.1	0.0	1.0	1.0	0.0
E043	chr16	89999311	89999823	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.248	0.7229	NA	NA	NA	1.0	4.2	0.0	0.0	1.0	1.9
E044	chr16	89999823	90000024	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.415	0.5126	NA	NA	NA	0.0	4.2	1.0	0.0	2.0	0.0
E045	chr16	90000102	90000297	FALSE	LOW_COUNTS_INDEP_FILTER	2.7	0.065	0.4828	NA	NA	NA	2.0	5.2	3.0	0.0	2.0	3.9
E046	chr16	90000448	90000553	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0599	0.3764	NA	NA	NA	2.0	5.2	4.0	0.0	2.0	3.9
E047	chr16	90000553	90000668	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0645	0.1521	NA	NA	NA	3.0	3.1	3.0	0.0	1.0	1.9
E048	chr16	90000668	90002161	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0989	0.4716	NA	NA	NA	2.0	1.0	3.0	2.0	0.0	1.0
J049	chr16	89972765	89977604	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.551	0.6132	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J050	chr16	89972765	89977638	TRUE	OK	64.2	0.0108	0.3253	0.7997	-0.223	-0.111	77.9	60.5	82.6	43.7	49.9	70.6
J051	chr16	89972765	89977677	TRUE	OK	28.1	0.00518	0.1484	0.734	-0.374	-0.187	30.6	33.4	37.3	22.8	19.6	25.1
J052	chr16	89972765	89978809	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.124	0.3744	NA	NA	NA	6.9	8.3	2.0	6.9	2.9	14.5
J053	chr16	89977802	89978809	TRUE	OK	68.4	0.00398	0.4535	0.8405	-0.132	-0.066	87.8	74.0	67.5	47.7	65.6	67.7
J054	chr16	89977802	89980241	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0646	0.7881	NA	NA	NA	6.9	8.3	10.1	9.9	2.0	7.7
J055	chr16	89978878	89979301	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5164	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J056	chr16	89978878	89979714	FALSE	LOW_COUNTS_INDEP_FILTER	1.4	0.247	0.7385	NA	NA	NA	1.0	4.2	0.0	1.0	2.0	0.0
J057	chr16	89978878	89980241	TRUE	OK	74.9	0.0022	0.5815	0.8817	-0.087	-0.043	79.9	85.5	82.6	54.6	70.5	76.4
J058	chr16	89980336	89981772	TRUE	OK	124.5	0.00582	0.475	0.8479	-0.131	-0.065	120.3	163.7	133.0	102.3	107.7	119.9
J059	chr16	89981918	89984530	FALSE	LOW_COUNTS_INDEP_FILTER	9.2	0.0118	0.01269	NA	NA	NA	14.8	14.6	10.1	4.0	5.9	5.8
J060	chr16	89981923	89984530	TRUE	OK	127.8	0.0055	0.6231	0.8956	-0.091	-0.045	139.0	140.8	143.0	117.1	112.6	114.1
J061	chr16	89984599	89985445	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.0718	0.4089	NA	NA	NA	9.9	3.1	2.0	4.0	7.8	6.8
J062	chr16	89984599	89988851	TRUE	OK	15.1	0.00762	0.8288	0.9574	0.075	0.037	17.7	12.5	17.1	11.9	14.7	16.4
J063	chr16	89984599	89990865	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.748	0.8188	NA	NA	NA	0.0	1.0	4.0	4.0	0.0	0.0
J064	chr16	89984599	89993767	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J065	chr16	89984617	89990865	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.213	0.1398	NA	NA	NA	2.0	1.0	0.0	0.0	0.0	0.0
J066	chr16	89985570	89988681	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.152	0.41	NA	NA	NA	2.0	0.0	1.0	0.0	0.0	1.0
J067	chr16	89988951	89990865	TRUE	OK	58.7	0.00293	0.7619	0.9389	0.056	0.028	64.1	63.6	58.4	46.7	54.8	64.8
J068	chr16	89991003	89991228	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J069	chr16	89991003	89992720	TRUE	OK	54.9	0.0103	0.6523	0.9051	0.130	0.065	60.1	54.2	55.4	34.7	74.4	50.3
J070	chr16	89991383	89992720	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J071	chr16	89992828	89993767	TRUE	OK	77.1	0.00738	0.07392	0.6686	0.361	0.181	79.9	61.5	79.6	63.5	101.8	76.4
J072	chr16	89993893	89994692	TRUE	OK	13.0	0.0121	0.4701	0.8461	-0.282	-0.141	9.9	17.7	18.1	11.9	8.8	11.6
J073	chr16	89993893	89994758	TRUE	OK	49.4	0.0217	0.2454	0.7741	0.364	0.182	45.4	34.4	61.4	31.8	66.6	57.0
J074	chr16	89993893	89996782	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J075	chr16	89993893	89999823	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J076	chr16	89996892	89999195	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J077	chr16	89999311	89999823	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.5163	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J078	chr16	90000024	90000102	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.209	0.1392	NA	NA	NA	0.0	2.1	1.0	0.0	0.0	0.0
J079	chr16	90000297	90000448	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0604	0.7058	NA	NA	NA	2.0	3.1	2.0	0.0	1.0	3.9
N080	chr16	89972765	89977714	TRUE	OK	12.4	0.035	0.2617	0.7794	-0.555	-0.277	10.8	22.9	13.1	11.9	8.8	6.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000223959.8
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE