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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr19 | 9827891 | 9827893 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0898 | 0.2166 | NA | NA | NA | 1.0 | 4.2 | 2.0 | 0.0 | 1.0 | 1.0 |
E002 | chr19 | 9827893 | 9827895 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0756 | 0.4796 | NA | NA | NA | 2.0 | 4.2 | 2.0 | 0.0 | 2.9 | 1.0 |
E003 | chr19 | 9827895 | 9827914 | TRUE | OK | 151.8 | 0.00273 | 0.3453 | 0.8056 | 0.137 | 0.068 | 140.0 | 213.8 | 137.0 | 144.0 | 119.5 | 156.6 |
E004 | chr19 | 9827914 | 9827917 | TRUE | OK | 315.1 | 0.00221 | 0.8562 | 0.9648 | 0.036 | 0.018 | 304.7 | 442.1 | 303.2 | 295.9 | 258.5 | 286.2 |
E005 | chr19 | 9827917 | 9827925 | TRUE | OK | 400.0 | 0.00597 | 0.9396 | 0.9857 | 0.023 | 0.011 | 419.1 | 534.9 | 383.8 | 399.1 | 313.4 | 350.0 |
E006 | chr19 | 9827925 | 9827943 | TRUE | OK | 1616.7 | 0.00428 | 0.9257 | 0.9825 | 0.015 | 0.007 | 1595.4 | 2346.1 | 1481.6 | 1584.5 | 1218.2 | 1474.4 |
E007 | chr19 | 9827943 | 9827984 | TRUE | OK | 3266.5 | 0.00563 | 0.4505 | 0.8396 | -0.083 | -0.041 | 3135.5 | 5000.9 | 2981.4 | 3072.7 | 2423.7 | 2984.6 |
E008 | chr19 | 9827984 | 9828064 | TRUE | OK | 502.9 | 0.00456 | 0.4709 | 0.8465 | -0.063 | -0.032 | 511.7 | 721.6 | 489.5 | 448.7 | 366.3 | 479.6 |
E009 | chr19 | 9828326 | 9828389 | TRUE | OK | 4565.8 | 0.00736 | 0.4556 | 0.8413 | -0.089 | -0.044 | 4329.6 | 6947.6 | 4185.0 | 4276.9 | 3524.4 | 4131.3 |
E010 | chr19 | 9828389 | 9828393 | TRUE | OK | 4396.4 | 0.00602 | 0.5769 | 0.8805 | -0.059 | -0.029 | 4163.9 | 6696.3 | 4003.7 | 4126.0 | 3405.9 | 3982.4 |
E011 | chr19 | 9828393 | 9828591 | TRUE | OK | 238.6 | 0.00468 | 0.2358 | 0.771 | -0.147 | -0.074 | 240.6 | 354.5 | 242.7 | 207.5 | 208.6 | 177.9 |
E012 | chr19 | 9828591 | 9828675 | TRUE | OK | 5284.2 | 0.00681 | 0.6291 | 0.8974 | 0.074 | 0.036 | 4884.7 | 8066.5 | 4785.3 | 4999.7 | 4227.6 | 4741.4 |
E013 | chr19 | 9828675 | 9828805 | TRUE | OK | 90.6 | 0.00575 | 0.01177 | 0.4132 | -0.442 | -0.221 | 83.8 | 148.1 | 112.8 | 75.5 | 62.7 | 60.9 |
E014 | chr19 | 9828836 | 9828874 | TRUE | OK | 4319.3 | 0.00385 | 0.1512 | 0.7353 | 0.142 | 0.071 | 3918.4 | 6628.6 | 3815.4 | 4053.6 | 3490.2 | 4009.5 |
E015 | chr19 | 9828874 | 9828993 | TRUE | OK | 23.1 | 0.0201 | 0.8886 | 0.9733 | -0.006 | -0.003 | 25.6 | 24.0 | 28.2 | 18.9 | 18.6 | 23.2 |
E016 | chr19 | 9828993 | 9829964 | TRUE | OK | 82.8 | 0.0404 | 0.5566 | 0.8737 | -0.155 | -0.077 | 71.0 | 119.9 | 100.7 | 39.7 | 78.3 | 87.0 |
E017 | chr19 | 9829964 | 9830076 | TRUE | OK | 3430.9 | 0.00306 | 0.8222 | 0.9557 | -0.029 | -0.015 | 3196.6 | 5353.3 | 3038.8 | 3276.2 | 2690.1 | 3030.1 |
E018 | chr19 | 9830076 | 9830113 | TRUE | OK | 1126.7 | 0.00127 | 1.367e-05 | 0.00709 | 0.303 | 0.152 | 959.4 | 1637.1 | 911.5 | 1146.7 | 1029.2 | 1076.1 |
E019 | chr19 | 9830113 | 9830114 | TRUE | OK | 177.9 | 0.00175 | 0.0004164 | 0.07976 | 0.408 | 0.204 | 142.0 | 237.7 | 147.1 | 190.6 | 165.5 | 184.7 |
E020 | chr19 | 9830114 | 9830115 | TRUE | OK | 132.1 | 0.00272 | 0.001869 | 0.1837 | 0.434 | 0.217 | 109.4 | 170.0 | 107.8 | 143.0 | 113.6 | 148.9 |
J021 | chr19 | 9827943 | 9828326 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.362 | 0.8748 | NA | NA | NA | 3.9 | 0.0 | 2.0 | 2.0 | 3.9 | 0.0 |
J022 | chr19 | 9827984 | 9828326 | TRUE | OK | 2963.7 | 0.00414 | 0.5703 | 0.8782 | -0.055 | -0.028 | 2824.9 | 4561.9 | 2671.2 | 2805.6 | 2216.1 | 2702.3 |
J023 | chr19 | 9828064 | 9828326 | TRUE | OK | 476.7 | 0.00342 | 0.5472 | 0.8711 | -0.043 | -0.022 | 483.1 | 679.9 | 461.3 | 433.8 | 354.5 | 447.6 |
J024 | chr19 | 9828389 | 9828836 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0227 | 0.9202 | NA | NA | NA | 4.9 | 5.2 | 4.0 | 5.0 | 2.0 | 4.8 |
J025 | chr19 | 9828393 | 9828591 | TRUE | OK | 4265.5 | 0.00549 | 0.7243 | 0.9275 | -0.030 | -0.015 | 4028.8 | 6481.5 | 3880.8 | 4028.7 | 3300.2 | 3873.1 |
J026 | chr19 | 9828393 | 9829964 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.0 | 0.0159 | 0.744 | NA | NA | NA | 12.8 | 10.4 | 8.1 | 6.0 | 7.8 | 8.7 |
J027 | chr19 | 9828675 | 9828836 | TRUE | OK | 3875.2 | 0.00205 | 0.2837 | 0.7862 | 0.079 | 0.040 | 3533.9 | 5948.7 | 3447.7 | 3616.7 | 3121.0 | 3583.1 |
J028 | chr19 | 9828874 | 9829964 | TRUE | OK | 3238.7 | 0.00307 | 0.8976 | 0.9755 | -0.022 | -0.011 | 3008.3 | 5072.8 | 2850.4 | 3078.6 | 2512.8 | 2909.2 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000198258.10 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |