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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr9 | 127447673 | 127447676 | TRUE | OK | 158.5 | 0.0191 | 0.3112 | 0.7948 | -0.235 | -0.117 | 170.6 | 206.5 | 127.9 | 180.7 | 99.9 | 165.3 |
E002 | chr9 | 127447676 | 127447679 | TRUE | OK | 280.2 | 0.0145 | 0.09983 | 0.6978 | -0.331 | -0.165 | 308.6 | 362.9 | 248.8 | 281.0 | 179.2 | 300.7 |
E003 | chr9 | 127447679 | 127447726 | TRUE | OK | 4384.9 | 0.00482 | 0.1842 | 0.7505 | -0.175 | -0.087 | 4012.1 | 5886.2 | 3744.9 | 4402.0 | 3875.0 | 4389.4 |
E004 | chr9 | 127447726 | 127447876 | TRUE | OK | 98.2 | 0.0101 | 0.0002084 | 0.05109 | -0.770 | -0.385 | 110.4 | 155.4 | 100.7 | 55.6 | 81.3 | 86.0 |
E005 | chr9 | 127447876 | 127447989 | TRUE | OK | 15150.6 | 0.003 | 0.04013 | 0.5942 | -0.203 | -0.102 | 13829.8 | 19533.3 | 13621.7 | 14900.8 | 14089.9 | 14928.0 |
E006 | chr9 | 127448336 | 127448423 | TRUE | OK | 23110.9 | 0.00207 | 0.107 | 0.7045 | -0.131 | -0.065 | 21308.6 | 28113.8 | 20528.2 | 23402.0 | 21629.4 | 23683.6 |
E007 | chr9 | 127449109 | 127449280 | TRUE | OK | 409.8 | 0.0114 | 0.1448 | 0.7323 | -0.269 | -0.134 | 387.5 | 543.3 | 388.8 | 376.3 | 454.4 | 308.4 |
E008 | chr9 | 127449280 | 127449362 | TRUE | OK | 29730.7 | 0.00215 | 0.6053 | 0.8897 | -0.038 | -0.019 | 27738.4 | 33909.2 | 26426.5 | 30717.9 | 28084.8 | 31507.3 |
E009 | chr9 | 127449609 | 127449700 | TRUE | OK | 41990.4 | 0.0095 | 0.3912 | 0.8208 | 0.156 | 0.078 | 38907.9 | 45341.6 | 37213.9 | 44429.3 | 39888.0 | 46161.6 |
E010 | chr9 | 127449700 | 127449708 | TRUE | OK | 32565.3 | 0.00443 | 0.2772 | 0.7839 | 0.133 | 0.066 | 29947.1 | 34929.0 | 28867.0 | 34536.2 | 31217.5 | 35894.8 |
E011 | chr9 | 127449708 | 127450730 | TRUE | OK | 532.7 | 0.0167 | 0.004456 | 0.2804 | -0.601 | -0.300 | 622.2 | 661.1 | 610.4 | 447.7 | 527.8 | 326.8 |
E012 | chr9 | 127450730 | 127450804 | TRUE | OK | 40828.5 | 0.00498 | 0.05548 | 0.6386 | 0.244 | 0.121 | 36957.6 | 43260.4 | 36539.0 | 43549.7 | 40224.9 | 44439.7 |
E013 | chr9 | 127450804 | 127451049 | TRUE | OK | 415.0 | 0.0285 | 0.07142 | 0.665 | -0.468 | -0.234 | 465.4 | 469.2 | 485.5 | 384.2 | 450.5 | 234.9 |
E014 | chr9 | 127451049 | 127451280 | TRUE | OK | 523.4 | 0.00418 | 4.767e-10 | 1.14e-06 | -0.738 | -0.369 | 630.1 | 668.4 | 633.5 | 374.3 | 415.2 | 418.6 |
E015 | chr9 | 127451280 | 127451373 | TRUE | OK | 33942.6 | 0.00588 | 0.09897 | 0.697 | 0.230 | 0.115 | 31098.7 | 34986.4 | 30216.7 | 36717.3 | 33263.2 | 37373.1 |
E016 | chr9 | 127451373 | 127451405 | TRUE | OK | 18134.5 | 0.00393 | 0.09964 | 0.6978 | 0.186 | 0.093 | 16455.5 | 18415.5 | 16039.0 | 19926.3 | 17508.5 | 20462.1 |
E017 | chr9 | 127451405 | 127451406 | TRUE | OK | 24.1 | 0.0077 | 0.5453 | 0.8703 | -0.161 | -0.081 | 24.7 | 24.0 | 26.2 | 22.8 | 20.6 | 26.1 |
J018 | chr9 | 127447726 | 127447876 | TRUE | OK | 4361.8 | 0.00458 | 0.1797 | 0.7488 | -0.172 | -0.086 | 3981.5 | 5850.7 | 3728.7 | 4388.1 | 3850.5 | 4371.1 |
J019 | chr9 | 127447989 | 127448336 | TRUE | OK | 14555.1 | 0.00285 | 0.04718 | 0.6173 | -0.193 | -0.097 | 13200.7 | 18786.7 | 13063.7 | 14305.1 | 13552.3 | 14422.3 |
J020 | chr9 | 127448423 | 127449280 | TRUE | OK | 19419.5 | 0.0014 | 0.5721 | 0.8789 | -0.036 | -0.018 | 18106.1 | 22455.0 | 17073.4 | 19961.0 | 18325.3 | 20596.5 |
J021 | chr9 | 127449362 | 127449609 | TRUE | OK | 21887.2 | 0.00292 | 0.7437 | 0.9336 | 0.037 | 0.018 | 20510.0 | 24048.2 | 19306.4 | 22766.6 | 20596.2 | 24095.5 |
J022 | chr9 | 127449362 | 127450730 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.2 | 0.0117 | 0.1759 | NA | NA | NA | 8.9 | 10.4 | 13.1 | 7.9 | 7.8 | 6.8 |
J023 | chr9 | 127449708 | 127450730 | TRUE | OK | 30575.7 | 0.00448 | 0.2735 | 0.783 | 0.134 | 0.067 | 27996.7 | 32707.0 | 27149.7 | 32417.6 | 29101.3 | 34082.0 |
J024 | chr9 | 127450804 | 127451049 | TRUE | OK | 153.9 | 0.00416 | 6.567e-09 | 1.112e-05 | -0.831 | -0.416 | 191.3 | 197.1 | 194.4 | 103.3 | 111.6 | 125.7 |
J025 | chr9 | 127450804 | 127451280 | TRUE | OK | 33466.2 | 0.00557 | 0.07319 | 0.6678 | 0.242 | 0.120 | 30577.1 | 34442.1 | 29691.9 | 36288.4 | 32797.1 | 37000.8 |
N026 | chr9 | 127450804 | 127451284 | TRUE | OK | 22.2 | 0.0102 | 0.721 | 0.9264 | 0.115 | 0.058 | 26.6 | 18.8 | 17.1 | 27.8 | 20.6 | 22.2 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000197958.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |