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Normalized Counts Table (ENSG00000154380.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	225486834	225495479	TRUE	OK	2418.8	0.0196	0.3341	0.8022	-0.235	-0.117	2444.3	3042.7	2128.3	2396.6	2226.9	2274.0
E002	chr1	225495479	225496884	TRUE	OK	4406.7	0.0095	0.2196	0.7647	-0.193	-0.097	4475.5	4837.2	4293.8	4382.2	4127.7	4323.7
E003	chr1	225496884	225497084	TRUE	OK	1218.1	0.00167	0.4815	0.8498	0.048	0.024	1343.9	1007.3	1172.4	1274.7	1243.7	1266.6
E004	chr1	225497084	225497422	TRUE	OK	1936.2	0.00314	0.6753	0.912	0.030	0.015	2158.4	1526.5	1954.0	2022.3	1962.5	1993.6
E005	chr1	225497422	225497633	TRUE	OK	1416.0	0.00375	0.1531	0.7358	0.140	0.070	1527.3	1053.1	1393.0	1552.7	1488.5	1481.2
E006	chr1	225497633	225497812	TRUE	OK	1468.0	0.00371	0.1279	0.7221	0.150	0.075	1554.9	1088.6	1463.5	1557.7	1533.6	1609.8
E007	chr1	225498346	225498404	TRUE	OK	1070.5	0.00619	0.1085	0.706	0.199	0.099	1163.5	738.2	1038.4	1177.4	1116.4	1189.2
E008	chr1	225500991	225501070	TRUE	OK	1239.6	0.00722	0.2027	0.7589	0.166	0.083	1381.4	867.5	1197.6	1320.4	1250.5	1420.3
E009	chr1	225501070	225501256	TRUE	OK	32.6	0.0471	0.9185	0.9809	-0.081	-0.040	41.4	15.6	41.3	36.7	40.2	20.3
E010	chr1	225504990	225505053	TRUE	OK	393.5	0.00392	0.2526	0.7762	0.127	0.063	426.9	286.7	391.8	425.9	389.8	439.9
E011	chr1	225507950	225508017	TRUE	OK	1213.8	0.0108	0.2703	0.7823	0.164	0.082	1398.2	800.8	1177.4	1318.4	1211.4	1376.8
E012	chr1	225508388	225508583	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.322	0.1523	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	1.9
E013	chr1	225511810	225511859	TRUE	OK	979.0	0.0163	0.1747	0.7462	0.250	0.125	1127.0	577.7	934.7	1104.0	978.3	1152.5
E014	chr1	225512656	225512714	TRUE	OK	1108.0	0.0126	0.1024	0.7001	0.277	0.139	1215.7	678.8	1065.6	1224.1	1141.8	1321.7
E015	chr1	225512870	225513016	TRUE	OK	950.5	0.00789	0.1879	0.7524	0.178	0.089	981.1	638.1	1009.2	1035.5	994.0	1045.2
E016	chr1	225514595	225514900	TRUE	OK	1211.6	0.0107	0.1663	0.7425	0.214	0.107	1221.7	781.0	1310.4	1315.4	1268.2	1372.9
E017	chr1	225514900	225515397	TRUE	OK	27.6	0.00796	0.5725	0.8791	-0.155	-0.078	32.5	21.9	31.2	21.8	25.5	32.9
E018	chr1	225517195	225517306	TRUE	OK	1238.6	0.00985	0.2068	0.7603	0.193	0.096	1244.3	833.1	1334.6	1335.3	1219.2	1464.8
E019	chr1	225517306	225517990	TRUE	OK	258.0	0.0124	0.7027	0.9206	0.047	0.023	304.7	168.9	272.0	255.1	294.8	252.3
E020	chr1	225519043	225519197	TRUE	OK	89.5	0.00331	0.4426	0.8372	0.122	0.061	82.8	85.5	83.6	91.3	98.9	94.7
E021	chr1	225519197	225519417	TRUE	OK	2967.5	0.00486	0.3813	0.8174	0.097	0.049	3018.2	2324.2	3135.5	3115.4	2857.5	3354.0
E022	chr1	225519417	225519565	TRUE	OK	2009.5	0.0043	0.326	0.7998	0.105	0.052	2141.6	1563.0	2010.4	2173.2	1897.8	2271.1
E023	chr1	225530553	225530638	TRUE	OK	1117.6	0.0108	0.09298	0.6915	0.267	0.133	1206.9	698.6	1091.8	1275.7	1150.7	1282.0
E024	chr1	225531045	225531057	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.857	0.6275	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
E025	chr1	225535506	225535563	TRUE	OK	27.0	0.0458	0.2239	0.7664	0.506	0.253	24.7	10.4	30.2	26.8	23.5	46.4
E026	chr1	225554905	225555083	TRUE	OK	1257.2	0.0186	0.1283	0.7223	0.298	0.149	1368.6	699.7	1269.1	1470.3	1317.1	1418.3
E027	chr1	225567248	225567270	TRUE	OK	682.1	0.0198	0.2355	0.7709	0.230	0.115	787.8	379.5	681.9	797.2	676.7	769.6
E028	chr1	225567270	225567414	TRUE	OK	803.6	0.026	0.2609	0.7793	0.231	0.116	962.3	416.0	800.7	928.3	847.1	867.3
E029	chr1	225580166	225580257	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.392	0.2832	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	0.0
E030	chr1	225652685	225652699	TRUE	OK	392.1	0.0187	0.7824	0.9451	0.009	0.004	487.1	233.6	428.1	401.1	394.6	408.0
E031	chr1	225652699	225652716	TRUE	OK	390.4	0.0175	0.9191	0.9811	-0.030	-0.015	484.1	238.8	436.1	396.1	392.7	394.5
E032	chr1	225652716	225653045	TRUE	OK	735.8	0.0193	0.688	0.9161	-0.127	-0.063	907.1	497.4	851.1	780.3	787.3	591.7
E033	chr1	225653045	225653142	TRUE	OK	188.5	0.321	0.3452	0.8056	-0.557	-0.278	273.1	154.3	233.7	229.3	215.4	25.1
J034	chr1	225497812	225498346	TRUE	OK	778.0	0.00562	0.04216	0.6011	0.251	0.126	801.6	524.5	767.5	856.8	818.7	899.2
J035	chr1	225498404	225500991	TRUE	OK	842.8	0.00505	0.2395	0.772	0.132	0.066	928.8	605.8	833.0	894.5	852.0	942.7
J036	chr1	225501070	225504990	TRUE	OK	303.5	0.00107	0.2415	0.7728	0.099	0.050	317.5	244.0	299.1	335.6	299.7	324.9
J037	chr1	225501070	225507950	TRUE	OK	638.5	0.0111	0.3381	0.8034	0.146	0.073	747.4	422.3	614.4	667.2	631.6	748.3
J038	chr1	225505053	225507950	TRUE	OK	304.2	0.00408	0.1095	0.7074	0.195	0.097	330.3	223.1	280.0	332.6	297.7	361.6
J039	chr1	225508017	225508388	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J040	chr1	225508017	225511810	TRUE	OK	836.4	0.0187	0.2053	0.7598	0.243	0.122	987.0	482.8	788.7	938.2	838.3	983.3
J041	chr1	225511859	225512656	TRUE	OK	818.6	0.0178	0.1642	0.7413	0.269	0.135	951.5	475.5	762.5	926.3	813.8	982.3
J042	chr1	225512714	225512870	TRUE	OK	697.9	0.0074	0.08202	0.6799	0.240	0.120	708.9	457.8	718.1	771.4	727.6	803.4
J043	chr1	225513016	225514595	TRUE	OK	442.2	0.00857	0.2782	0.7843	0.158	0.079	452.6	298.2	478.4	454.7	509.2	460.2
J044	chr1	225514900	225517195	TRUE	OK	618.9	0.015	0.218	0.7641	0.226	0.113	613.3	377.5	688.9	682.0	604.2	747.4
J045	chr1	225517306	225519197	TRUE	OK	1114.9	0.00932	0.1746	0.7462	0.206	0.103	1102.4	754.9	1198.6	1206.2	1096.8	1330.4
J046	chr1	225517990	225519197	TRUE	OK	75.8	0.00374	0.8048	0.9512	0.036	0.018	81.8	54.2	83.6	79.4	68.5	87.0
J047	chr1	225519565	225530553	TRUE	OK	758.5	0.0101	0.04877	0.622	0.314	0.157	821.3	472.4	701.0	884.6	775.6	896.3
J048	chr1	225530638	225531045	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J049	chr1	225530638	225535506	TRUE	OK	18.4	0.0578	0.1201	0.716	0.801	0.401	12.8	7.3	19.1	17.9	15.7	37.7
J050	chr1	225530638	225554905	TRUE	OK	733.5	0.0171	0.1188	0.7149	0.300	0.150	801.6	410.8	726.2	832.0	768.7	861.5
J051	chr1	225531057	225554905	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.5914	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J052	chr1	225535563	225554905	TRUE	OK	21.1	0.0502	0.4222	0.8305	0.354	0.177	20.7	8.3	25.2	21.8	15.7	34.8
J053	chr1	225555083	225567248	TRUE	OK	642.2	0.0176	0.2084	0.7608	0.238	0.119	728.7	368.1	638.6	753.5	636.5	728.0
J054	chr1	225567414	225580166	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.261	0.2608	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	0.0
J055	chr1	225567414	225652685	TRUE	OK	345.3	0.0261	0.8509	0.9635	-0.021	-0.010	447.6	192.9	381.7	341.5	339.8	368.4
N056	chr1	225514900	225519197	TRUE	OK	118.6	0.00358	0.1039	0.7014	0.235	0.118	122.3	82.4	114.8	148.9	115.6	127.6
N057	chr1	225567414	225600207	TRUE	OK	37.0	0.0261	0.0001004	0.03118	1.297	0.648	24.7	8.3	29.2	49.6	49.0	60.9
N058	chr1	225567414	225603486	TRUE	OK	20.6	0.0176	5.727e-10	1.353e-06	2.394	1.197	10.8	1.0	7.1	28.8	38.2	37.7
N059	chr1	225600362	225603486	TRUE	OK	9.7	0.0135	3.529e-07	0.0003508	2.569	1.285	3.0	2.1	3.0	15.9	12.7	21.3
N060	chr1	225600362	225652685	TRUE	OK	21.2	0.00859	0.2403	0.7724	0.352	0.176	16.8	15.6	22.2	26.8	28.4	17.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000154380.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE