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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 33077187 | 33077450 | TRUE | OK | 130.8 | 0.00377 | 7.648e-08 | 9.788e-05 | 0.785 | 0.392 | 104.5 | 93.8 | 127.9 | 147.9 | 161.6 | 148.9 |
E002 | chr11 | 33084583 | 33084594 | TRUE | OK | 12.4 | 0.0975 | 0.92 | 0.9813 | -0.165 | -0.082 | 15.8 | 22.9 | 4.0 | 11.9 | 12.7 | 6.8 |
E003 | chr11 | 33084594 | 33085031 | TRUE | OK | 870.0 | 0.0181 | 0.1805 | 0.7491 | -0.332 | -0.166 | 938.7 | 1324.3 | 848.1 | 690.0 | 713.9 | 704.8 |
E004 | chr11 | 33085031 | 33085289 | TRUE | OK | 1158.4 | 0.00869 | 0.3351 | 0.8025 | -0.162 | -0.081 | 1232.5 | 1538.0 | 1193.6 | 982.9 | 1000.8 | 1002.6 |
E005 | chr11 | 33085712 | 33085773 | TRUE | OK | 716.2 | 0.00263 | 0.9062 | 0.9776 | -0.013 | -0.006 | 760.2 | 852.9 | 750.4 | 635.4 | 658.1 | 640.0 |
E006 | chr11 | 33085894 | 33085904 | TRUE | OK | 520.8 | 0.00253 | 0.6925 | 0.9175 | -0.040 | -0.020 | 582.7 | 610.0 | 539.9 | 448.7 | 465.2 | 478.6 |
E007 | chr11 | 33085904 | 33085989 | TRUE | OK | 649.7 | 0.00236 | 0.8917 | 0.974 | 0.012 | 0.006 | 711.9 | 749.7 | 667.8 | 576.8 | 588.5 | 603.3 |
E008 | chr11 | 33086987 | 33087141 | TRUE | OK | 851.7 | 0.00169 | 0.6233 | 0.8956 | 0.039 | 0.019 | 975.2 | 919.7 | 876.3 | 770.4 | 791.3 | 777.3 |
E009 | chr11 | 33090531 | 33090727 | TRUE | OK | 706.6 | 0.0023 | 0.7721 | 0.9419 | -0.028 | -0.014 | 830.2 | 774.7 | 736.3 | 653.3 | 610.1 | 635.2 |
E010 | chr11 | 33092270 | 33092340 | TRUE | OK | 537.2 | 0.00254 | 0.0805 | 0.6778 | 0.171 | 0.086 | 609.4 | 514.1 | 556.0 | 509.3 | 511.2 | 523.1 |
E011 | chr11 | 33096305 | 33096408 | TRUE | OK | 574.5 | 0.00465 | 0.03829 | 0.5875 | 0.254 | 0.127 | 635.0 | 509.9 | 607.4 | 532.1 | 578.8 | 584.0 |
E012 | chr11 | 33096834 | 33096978 | TRUE | OK | 670.3 | 0.00443 | 0.117 | 0.7135 | 0.184 | 0.092 | 732.6 | 601.6 | 756.4 | 627.4 | 658.1 | 645.8 |
E013 | chr11 | 33098689 | 33098764 | TRUE | OK | 477.8 | 0.00241 | 0.8875 | 0.973 | 0.013 | 0.006 | 530.5 | 482.8 | 552.0 | 445.8 | 411.3 | 444.7 |
E014 | chr11 | 33099033 | 33099150 | TRUE | OK | 512.7 | 0.0026 | 0.0693 | 0.6615 | -0.185 | -0.093 | 617.2 | 544.3 | 612.4 | 454.7 | 408.4 | 438.9 |
E015 | chr11 | 33099607 | 33099717 | TRUE | OK | 460.0 | 0.00525 | 0.2959 | 0.7905 | -0.138 | -0.069 | 537.4 | 484.9 | 549.9 | 439.8 | 346.7 | 401.2 |
E016 | chr11 | 33102176 | 33102339 | TRUE | OK | 613.9 | 0.00523 | 0.606 | 0.8899 | 0.064 | 0.032 | 685.3 | 574.5 | 722.2 | 614.5 | 536.6 | 550.1 |
E017 | chr11 | 33103106 | 33103184 | TRUE | OK | 512.7 | 0.00799 | 0.5658 | 0.8769 | 0.081 | 0.040 | 576.8 | 445.2 | 624.5 | 506.3 | 473.0 | 450.5 |
E018 | chr11 | 33105566 | 33105693 | TRUE | OK | 607.3 | 0.00866 | 0.8947 | 0.9748 | 0.010 | 0.005 | 729.6 | 533.9 | 727.2 | 585.7 | 535.7 | 531.8 |
E019 | chr11 | 33105882 | 33105917 | TRUE | OK | 451.9 | 0.00629 | 0.8545 | 0.9643 | -0.032 | -0.016 | 547.2 | 421.3 | 530.8 | 439.8 | 381.9 | 390.6 |
E020 | chr11 | 33105997 | 33106064 | TRUE | OK | 502.1 | 0.0064 | 0.6399 | 0.9011 | -0.073 | -0.036 | 639.9 | 489.0 | 556.0 | 482.5 | 414.2 | 431.2 |
E021 | chr11 | 33107902 | 33108000 | TRUE | OK | 571.5 | 0.00673 | 0.5578 | 0.874 | -0.092 | -0.046 | 716.8 | 540.1 | 670.8 | 542.1 | 483.8 | 475.7 |
E022 | chr11 | 33108385 | 33108418 | TRUE | OK | 471.8 | 0.00685 | 0.5966 | 0.8869 | -0.086 | -0.043 | 579.8 | 441.1 | 568.1 | 451.7 | 397.6 | 392.5 |
E023 | chr11 | 33134412 | 33134469 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.18 | 0.1983 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 0.0 | 1.0 | 0.0 |
E024 | chr11 | 33136111 | 33136212 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.244 | 0.8511 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
E025 | chr11 | 33140965 | 33141464 | TRUE | OK | 18.8 | 0.00973 | 0.1043 | 0.7019 | -0.527 | -0.264 | 26.6 | 19.8 | 25.2 | 10.9 | 13.7 | 16.4 |
E026 | chr11 | 33141464 | 33141607 | TRUE | OK | 118.5 | 0.0106 | 0.983 | 0.9958 | -0.016 | -0.008 | 116.3 | 164.7 | 110.8 | 103.3 | 112.6 | 103.5 |
E027 | chr11 | 33141607 | 33141666 | TRUE | OK | 144.2 | 0.0106 | 0.7354 | 0.9313 | 0.060 | 0.030 | 144.0 | 190.8 | 130.9 | 123.1 | 150.8 | 125.7 |
E028 | chr11 | 33141666 | 33141707 | TRUE | OK | 737.3 | 0.00411 | 0.9049 | 0.9773 | 0.011 | 0.005 | 871.6 | 707.0 | 838.0 | 705.9 | 676.7 | 624.6 |
E029 | chr11 | 33141707 | 33141762 | TRUE | OK | 1024.2 | 0.0042 | 0.2412 | 0.7727 | 0.132 | 0.066 | 1172.4 | 957.2 | 1122.0 | 982.9 | 1013.6 | 897.2 |
E030 | chr11 | 33141762 | 33141884 | TRUE | OK | 68.7 | 0.0132 | 0.5568 | 0.8738 | -0.129 | -0.065 | 69.0 | 79.2 | 86.6 | 43.7 | 76.4 | 57.0 |
E031 | chr11 | 33141884 | 33141986 | TRUE | OK | 1227.9 | 0.00619 | 0.162 | 0.7401 | 0.184 | 0.092 | 1379.4 | 1091.7 | 1380.9 | 1179.4 | 1219.2 | 1116.7 |
E032 | chr11 | 33144869 | 33144973 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.1 | 0.167 | 0.6019 | NA | NA | NA | 12.8 | 3.1 | 2.0 | 10.9 | 3.9 | 3.9 |
E033 | chr11 | 33156707 | 33156803 | TRUE | OK | 18.8 | 0.0118 | 0.7434 | 0.9336 | -0.103 | -0.051 | 18.7 | 25.0 | 20.1 | 13.9 | 22.5 | 12.6 |
E034 | chr11 | 33161298 | 33161369 | TRUE | OK | 995.0 | 0.00693 | 0.1253 | 0.7203 | 0.213 | 0.106 | 1113.2 | 861.3 | 1115.0 | 951.1 | 956.8 | 972.6 |
E035 | chr11 | 33161369 | 33161421 | TRUE | OK | 715.2 | 0.008 | 0.3313 | 0.8013 | 0.143 | 0.072 | 846.0 | 629.8 | 782.6 | 677.1 | 640.4 | 715.5 |
E036 | chr11 | 33161421 | 33161480 | TRUE | OK | 290.4 | 0.0194 | 0.7987 | 0.9494 | 0.068 | 0.034 | 367.8 | 256.5 | 311.2 | 257.1 | 215.4 | 334.5 |
E037 | chr11 | 33161480 | 33161491 | TRUE | OK | 14.1 | 0.0106 | 0.986 | 0.9966 | -0.007 | -0.003 | 15.8 | 16.7 | 14.1 | 13.9 | 11.8 | 12.6 |
E038 | chr11 | 33161491 | 33161494 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.2 | 0.041 | 0.616 | NA | NA | NA | 4.9 | 7.3 | 6.0 | 8.9 | 2.0 | 7.7 |
E039 | chr11 | 33161494 | 33161495 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0953 | 0.9958 | NA | NA | NA | 3.0 | 3.1 | 3.0 | 6.0 | 1.0 | 1.0 |
E040 | chr11 | 33161495 | 33161531 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0953 | 0.9958 | NA | NA | NA | 3.0 | 3.1 | 3.0 | 6.0 | 1.0 | 1.0 |
E041 | chr11 | 33162165 | 33162371 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0482 | 0.9204 | NA | NA | NA | 3.9 | 4.2 | 2.0 | 2.0 | 2.0 | 4.8 |
J042 | chr11 | 33077450 | 33085031 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.262 | 0.9159 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J043 | chr11 | 33085289 | 33085712 | TRUE | OK | 537.7 | 0.00368 | 0.7614 | 0.9388 | -0.038 | -0.019 | 557.1 | 667.3 | 563.0 | 474.6 | 486.7 | 477.6 |
J044 | chr11 | 33085773 | 33085894 | TRUE | OK | 465.3 | 0.00175 | 0.4629 | 0.8437 | -0.067 | -0.033 | 521.6 | 551.6 | 486.5 | 404.1 | 411.3 | 416.7 |
J045 | chr11 | 33085989 | 33086987 | TRUE | OK | 466.0 | 0.00262 | 0.1846 | 0.7506 | 0.133 | 0.067 | 544.3 | 470.3 | 458.3 | 431.9 | 443.6 | 447.6 |
J046 | chr11 | 33087141 | 33090531 | TRUE | OK | 454.2 | 0.00125 | 0.927 | 0.9828 | -0.008 | -0.004 | 512.7 | 512.0 | 472.4 | 401.1 | 409.3 | 417.7 |
J047 | chr11 | 33090727 | 33092270 | TRUE | OK | 297.8 | 0.00583 | 0.6793 | 0.9133 | -0.059 | -0.030 | 363.8 | 324.3 | 308.2 | 283.9 | 227.2 | 279.4 |
J048 | chr11 | 33092340 | 33096305 | TRUE | OK | 399.7 | 0.00518 | 0.03644 | 0.5806 | 0.276 | 0.138 | 449.6 | 341.0 | 417.0 | 374.3 | 411.3 | 405.1 |
J049 | chr11 | 33096408 | 33096834 | TRUE | OK | 443.5 | 0.00356 | 0.01853 | 0.4802 | 0.268 | 0.134 | 464.4 | 395.2 | 484.5 | 412.0 | 449.5 | 455.4 |
J050 | chr11 | 33096978 | 33098689 | TRUE | OK | 321.1 | 0.00444 | 0.2216 | 0.7653 | 0.154 | 0.077 | 362.9 | 285.7 | 358.6 | 292.9 | 306.5 | 320.0 |
J051 | chr11 | 33098764 | 33099033 | TRUE | OK | 331.3 | 0.00142 | 0.162 | 0.7401 | -0.129 | -0.064 | 371.7 | 365.0 | 393.8 | 302.8 | 266.4 | 288.1 |
J052 | chr11 | 33099150 | 33099607 | TRUE | OK | 324.7 | 0.00206 | 0.005023 | 0.2969 | -0.285 | -0.143 | 394.4 | 376.4 | 385.8 | 279.0 | 237.0 | 275.5 |
J053 | chr11 | 33099717 | 33102176 | TRUE | OK | 293.1 | 0.00892 | 0.9113 | 0.979 | -0.019 | -0.009 | 346.1 | 276.3 | 346.5 | 300.8 | 222.3 | 266.8 |
J054 | chr11 | 33102339 | 33103106 | TRUE | OK | 350.9 | 0.00406 | 0.1152 | 0.7124 | 0.192 | 0.096 | 357.9 | 317.0 | 413.0 | 359.4 | 335.9 | 322.0 |
J055 | chr11 | 33103184 | 33105566 | TRUE | OK | 375.3 | 0.0117 | 0.9043 | 0.9771 | 0.005 | 0.003 | 446.7 | 311.8 | 473.4 | 362.4 | 327.1 | 330.7 |
J056 | chr11 | 33105693 | 33105882 | TRUE | OK | 369.2 | 0.00633 | 0.9337 | 0.9844 | -0.020 | -0.010 | 454.5 | 336.8 | 429.1 | 356.4 | 317.3 | 321.0 |
J057 | chr11 | 33105917 | 33105997 | TRUE | OK | 345.1 | 0.00369 | 0.523 | 0.8632 | -0.078 | -0.039 | 418.1 | 352.4 | 389.8 | 335.6 | 277.1 | 297.8 |
J058 | chr11 | 33106064 | 33107902 | TRUE | OK | 378.5 | 0.00624 | 0.8935 | 0.9745 | -0.027 | -0.013 | 481.2 | 355.6 | 417.0 | 362.4 | 320.2 | 334.5 |
J059 | chr11 | 33108000 | 33108385 | TRUE | OK | 393.6 | 0.00613 | 0.6412 | 0.9015 | -0.074 | -0.037 | 481.2 | 366.0 | 474.4 | 373.3 | 331.0 | 335.5 |
J060 | chr11 | 33108418 | 33141666 | TRUE | OK | 402.9 | 0.00951 | 0.5485 | 0.8716 | -0.114 | -0.057 | 508.8 | 362.9 | 496.6 | 387.2 | 334.9 | 326.8 |
J061 | chr11 | 33134469 | 33136111 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J062 | chr11 | 33136212 | 33141666 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.266 | 0.9115 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J063 | chr11 | 33141762 | 33141884 | TRUE | OK | 810.8 | 0.00563 | 0.07606 | 0.6722 | 0.230 | 0.115 | 919.0 | 708.0 | 872.3 | 814.1 | 823.6 | 728.0 |
J064 | chr11 | 33141986 | 33144869 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.416 | 0.8384 | NA | NA | NA | 5.9 | 1.0 | 0.0 | 3.0 | 0.0 | 1.0 |
J065 | chr11 | 33141986 | 33156707 | TRUE | OK | 12.3 | 0.0358 | 0.936 | 0.9849 | -0.004 | -0.002 | 10.8 | 15.6 | 14.1 | 7.9 | 18.6 | 6.8 |
J066 | chr11 | 33141986 | 33161298 | TRUE | OK | 907.8 | 0.00731 | 0.1038 | 0.7014 | 0.232 | 0.116 | 1002.8 | 770.6 | 1027.4 | 866.7 | 889.2 | 890.5 |
J067 | chr11 | 33144973 | 33161298 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.11 | 0.9464 | NA | NA | NA | 8.9 | 2.1 | 2.0 | 5.0 | 2.0 | 2.9 |
J068 | chr11 | 33156803 | 33161298 | TRUE | OK | 14.5 | 0.00916 | 0.2456 | 0.7741 | -0.411 | -0.205 | 13.8 | 22.9 | 17.1 | 9.9 | 12.7 | 10.6 |
J069 | chr11 | 33161369 | 33162165 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.67 | 0.3246 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000176102.13 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |