<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000109686.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr4	151102750	151103132	TRUE	OK	48769.1	0.0313	0.02176	0.505	-0.709	-0.348	45346.5	70238.6	43831.3	46619.4	40987.8	45591.2
E002	chr4	151120278	151120280	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0966	0.5715	NA	NA	NA	4.9	1.0	1.0	4.0	2.9	1.9
E003	chr4	151120280	151120283	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.0368	0.4875	NA	NA	NA	4.9	2.1	4.0	5.0	3.9	4.8
E004	chr4	151120283	151120286	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0397	0.5867	NA	NA	NA	6.9	4.2	10.1	9.9	5.9	7.7
E005	chr4	151120286	151120309	TRUE	OK	25.3	0.00726	0.1474	0.7336	0.401	0.200	17.7	32.3	20.1	31.8	21.5	28.0
E006	chr4	151120309	151120690	TRUE	OK	374.4	0.00141	2.631e-05	0.01158	0.378	0.189	321.4	426.5	301.2	426.9	369.2	401.2
E007	chr4	151120690	151120811	TRUE	OK	385.3	0.00613	0.001123	0.141	0.487	0.243	356.9	381.6	297.1	420.9	410.3	444.7
E008	chr4	151120811	151121819	TRUE	OK	1523.0	0.011	0.001072	0.1372	0.609	0.305	1350.8	1331.6	1240.9	1807.9	1661.8	1745.1
E009	chr4	151121819	151122207	TRUE	OK	793.8	0.0257	0.05191	0.6301	0.549	0.274	784.9	597.5	704.0	890.5	868.6	917.5
E010	chr4	151127617	151127715	TRUE	OK	492.8	0.0241	0.0164	0.4627	0.660	0.330	455.5	360.8	422.0	571.8	588.5	557.9
E011	chr4	151128169	151128356	TRUE	OK	568.7	0.0255	0.0145	0.444	0.687	0.343	538.4	403.5	472.4	706.9	643.4	647.8
E012	chr4	151132330	151132383	TRUE	OK	386.6	0.0253	0.009926	0.3908	0.725	0.362	372.7	270.1	303.2	491.4	430.9	451.5
E013	chr4	151133033	151133236	TRUE	OK	592.6	0.0269	0.02375	0.5176	0.653	0.326	556.1	419.2	518.7	730.7	656.1	674.9
E014	chr4	151135073	151135132	TRUE	OK	363.9	0.0287	0.03386	0.5693	0.641	0.320	337.2	252.3	331.4	447.7	373.1	441.8
E015	chr4	151137731	151137732	TRUE	OK	259.0	0.0316	0.02571	0.5297	0.710	0.355	236.6	168.9	231.7	333.6	264.4	319.1
E016	chr4	151137732	151137862	TRUE	OK	458.6	0.0328	0.03388	0.5693	0.674	0.337	453.6	304.5	387.8	581.8	468.1	555.9
E017	chr4	151139774	151139847	TRUE	OK	431.2	0.0439	0.09215	0.691	0.605	0.302	458.5	265.9	382.7	509.3	441.7	528.9
E018	chr4	151143909	151144050	TRUE	OK	514.9	0.0406	0.09231	0.691	0.583	0.291	552.2	330.5	451.2	623.5	525.9	606.2
E019	chr4	151144050	151144219	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.0401	0.3971	NA	NA	NA	8.9	3.1	5.0	6.9	5.9	8.7
E020	chr4	151144219	151144288	TRUE	OK	117.8	0.0194	0.1464	0.7333	0.390	0.195	131.1	101.1	95.7	122.1	128.3	128.6
E021	chr4	151144288	151144404	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.197	0.4705	NA	NA	NA	0.0	2.1	7.1	3.0	3.9	4.8
E022	chr4	151147921	151148186	TRUE	OK	475.3	0.0384	0.03564	0.577	0.710	0.355	463.4	294.0	413.0	580.8	548.4	552.1
E023	chr4	151149499	151149561	TRUE	OK	323.2	0.04	0.01312	0.4278	0.857	0.428	304.7	185.6	257.8	385.2	404.4	401.2
E024	chr4	151159239	151159352	TRUE	OK	379.2	0.0511	0.03039	0.5532	0.827	0.414	381.6	203.3	304.2	445.8	489.6	450.5
E025	chr4	151165588	151165696	TRUE	OK	367.9	0.054	0.0505	0.6267	0.769	0.384	374.7	198.1	311.2	434.8	479.8	409.0
E026	chr4	151165696	151166320	TRUE	OK	20.5	0.0375	0.1369	0.7275	0.657	0.329	22.7	13.6	15.1	30.8	24.5	16.4
E027	chr4	151170532	151170791	TRUE	OK	11.7	0.0678	0.3858	0.8189	0.510	0.255	15.8	5.2	10.1	17.9	9.8	11.6
E028	chr4	151174669	151175292	TRUE	OK	1070.1	0.0448	0.04588	0.6134	0.717	0.358	1064.9	634.0	937.7	1317.4	1235.9	1230.8
E029	chr4	151175292	151175552	TRUE	OK	632.0	0.0569	0.03443	0.5719	0.840	0.420	641.9	319.1	515.7	825.0	722.7	767.7
E030	chr4	151175552	151175674	TRUE	OK	335.9	0.0759	0.02742	0.5396	0.983	0.492	358.9	138.7	238.7	408.0	433.8	437.0
E031	chr4	151175674	151175695	FALSE	LOW_COUNTS_INDEP_FILTER	3.7	0.133	0.2144	NA	NA	NA	2.0	4.2	1.0	9.9	1.0	3.9
E032	chr4	151176524	151176533	TRUE	OK	15.3	0.2	0.287	0.7875	0.874	0.437	16.8	2.1	16.1	17.9	9.8	29.0
E033	chr4	151176533	151176556	TRUE	OK	197.4	0.0689	0.014	0.4379	1.067	0.534	204.1	81.3	130.9	264.1	232.1	271.7
E034	chr4	151176556	151176618	TRUE	OK	221.3	0.063	0.01055	0.3995	1.077	0.539	218.9	94.9	151.1	303.8	250.7	308.4
E035	chr4	151176618	151176624	TRUE	OK	174.7	0.0648	0.007848	0.3575	1.141	0.570	169.6	70.9	115.8	245.2	202.7	243.6
E036	chr4	151176624	151176687	TRUE	OK	245.6	0.0593	0.0113	0.4087	1.045	0.522	225.8	108.4	189.4	318.7	289.9	341.3
E037	chr4	151176816	151176955	TRUE	OK	329.0	0.0861	0.04611	0.6143	0.953	0.476	305.7	126.2	299.1	396.1	448.5	398.3
E038	chr4	151179354	151179397	TRUE	OK	246.4	0.0893	0.06509	0.6549	0.897	0.448	226.8	94.9	238.7	286.9	341.8	289.1
E039	chr4	151181688	151181729	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0951	0.9983	NA	NA	NA	11.8	3.1	7.1	4.0	7.8	7.7
E040	chr4	151187422	151187463	TRUE	OK	261.5	0.077	0.0678	0.6591	0.839	0.420	258.3	113.7	237.7	323.6	356.5	279.4
E041	chr4	151226046	151226066	TRUE	OK	245.5	0.06	0.07676	0.6735	0.745	0.372	253.4	129.3	212.5	324.6	317.3	235.9
E042	chr4	151226066	151226086	TRUE	OK	236.6	0.0585	0.08376	0.6818	0.722	0.361	258.3	131.4	189.4	316.7	307.5	216.6
E043	chr4	151226167	151226240	TRUE	OK	49.3	0.043	0.04703	0.6169	0.778	0.389	54.2	27.1	36.3	58.6	51.9	67.7
E044	chr4	151226240	151226453	TRUE	OK	27.8	0.0593	0.118	0.7144	0.747	0.373	32.5	13.6	21.2	27.8	29.4	42.5
E045	chr4	151226453	151226508	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.752	0.3727	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.9
E046	chr4	151226508	151226598	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.865	0.5697	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
E047	chr4	151227759	151227917	TRUE	OK	37.3	0.0559	0.0001808	0.04657	1.685	0.843	30.6	11.5	16.1	49.6	58.8	57.0
E048	chr4	151227917	151227925	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.0461	0.1793	NA	NA	NA	3.9	1.0	2.0	4.0	4.9	3.9
E049	chr4	151227925	151228030	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0495	0.22	NA	NA	NA	3.0	1.0	2.0	4.0	3.9	2.9
E050	chr4	151266085	151266246	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.157	0.06754	NA	NA	NA	2.0	2.1	0.0	1.0	7.8	4.8
E051	chr4	151325240	151325632	TRUE	OK	305.9	0.106	0.9698	0.9928	0.160	0.080	372.7	214.8	337.4	403.1	376.0	131.5
J052	chr4	151103132	151120690	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.438	0.7232	NA	NA	NA	2.0	0.0	0.0	1.0	0.0	0.0
J053	chr4	151122207	151127617	TRUE	OK	347.4	0.0256	0.02729	0.5389	0.630	0.315	334.3	255.5	293.1	383.2	406.4	411.9
J054	chr4	151127715	151128169	TRUE	OK	312.3	0.0246	0.01345	0.4318	0.694	0.347	274.1	223.1	276.0	388.2	361.4	351.0
J055	chr4	151128356	151132330	TRUE	OK	272.5	0.0306	0.01094	0.4045	0.780	0.390	269.2	179.3	202.5	346.5	313.4	323.9
J056	chr4	151132383	151133033	TRUE	OK	321.0	0.0231	0.01119	0.4078	0.690	0.345	305.7	233.6	256.8	411.0	348.6	370.3
J057	chr4	151133236	151135073	TRUE	OK	274.5	0.0278	0.0427	0.6028	0.608	0.304	246.5	196.0	260.9	334.6	286.9	322.0
J058	chr4	151135132	151137731	TRUE	OK	257.2	0.0351	0.03201	0.5611	0.716	0.358	235.7	164.7	230.7	331.6	261.5	319.1
J059	chr4	151137862	151139774	TRUE	OK	290.5	0.0373	0.03669	0.5818	0.709	0.354	298.8	187.7	228.6	353.4	291.8	382.9
J060	chr4	151139847	151143909	TRUE	OK	345.6	0.0453	0.1335	0.7254	0.551	0.275	371.7	219.0	315.3	408.0	348.6	410.9
J061	chr4	151144050	151144219	TRUE	OK	91.8	0.0277	0.2796	0.7849	0.342	0.171	109.4	74.0	76.5	91.3	97.9	101.5
J062	chr4	151144050	151147921	TRUE	OK	143.7	0.0549	0.07638	0.6728	0.729	0.365	135.1	77.2	138.0	198.6	145.9	167.3
J063	chr4	151144288	151147921	TRUE	OK	80.0	0.0213	0.05481	0.6368	0.546	0.273	86.8	66.7	56.4	86.4	98.9	85.1
J064	chr4	151148186	151149499	TRUE	OK	206.8	0.0344	0.0133	0.4299	0.815	0.408	186.4	126.2	174.2	254.2	235.0	264.9
J065	chr4	151149561	151159239	TRUE	OK	251.5	0.0459	0.01715	0.4695	0.886	0.443	232.7	139.7	202.5	293.9	335.9	304.6
J066	chr4	151159352	151165588	TRUE	OK	223.0	0.0802	0.05929	0.6463	0.867	0.434	250.4	99.1	164.2	255.1	298.7	270.7
J067	chr4	151159352	151174669	TRUE	OK	32.2	0.00808	3.393e-05	0.01402	1.104	0.552	22.7	19.8	24.2	48.6	40.2	37.7
J068	chr4	151165696	151174669	TRUE	OK	233.6	0.0444	0.06107	0.6497	0.687	0.343	232.7	141.8	205.5	269.0	290.8	262.0
J069	chr4	151170791	151174669	FALSE	LOW_COUNTS_INDEP_FILTER	7.1	0.0562	0.5784	NA	NA	NA	10.8	3.1	6.0	7.9	7.8	6.8
J070	chr4	151175674	151176524	TRUE	OK	13.3	0.178	0.2157	0.7634	0.987	0.494	15.8	2.1	11.1	14.9	9.8	26.1
J071	chr4	151175674	151176533	TRUE	OK	167.9	0.0685	0.01006	0.3928	1.117	0.558	174.5	71.9	99.7	225.4	201.7	234.0
J072	chr4	151175695	151176533	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0983	0.4696	NA	NA	NA	2.0	1.0	0.0	3.0	0.0	1.9
J073	chr4	151176687	151176816	TRUE	OK	172.9	0.0652	0.02229	0.5081	0.992	0.496	149.9	76.1	151.1	225.4	211.5	223.3
J074	chr4	151176955	151179354	TRUE	OK	223.5	0.103	0.0697	0.6622	0.940	0.470	202.1	81.3	215.5	260.1	311.4	270.7
J075	chr4	151179397	151181688	FALSE	LOW_COUNTS_INDEP_FILTER	5.4	0.216	0.9472	NA	NA	NA	10.8	1.0	6.0	2.0	6.9	5.8
J076	chr4	151179397	151187422	TRUE	OK	193.6	0.106	0.08108	0.6783	0.915	0.458	173.5	69.9	193.4	230.3	272.2	222.4
J077	chr4	151181729	151187422	FALSE	LOW_COUNTS_INDEP_FILTER	4.4	0.261	0.9912	NA	NA	NA	9.9	0.0	5.0	3.0	4.9	3.9
J078	chr4	151187463	151226046	TRUE	OK	189.5	0.0805	0.06557	0.6555	0.880	0.440	190.3	83.4	160.1	249.2	263.4	190.5
J079	chr4	151226086	151226167	TRUE	OK	35.8	0.0308	0.00778	0.3561	0.972	0.486	33.5	18.8	26.2	42.7	44.1	49.3
J080	chr4	151226086	151227759	TRUE	OK	26.9	0.0257	7.885e-08	0.0001006	2.020	1.010	17.7	9.4	8.1	36.7	45.0	44.5
J081	chr4	151226086	151266085	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.123	0.0664	NA	NA	NA	2.0	2.1	0.0	1.0	6.9	4.8
J082	chr4	151226086	151325240	TRUE	OK	143.7	0.0877	0.5487	0.8716	0.382	0.191	176.5	93.8	130.9	203.5	174.3	83.1
J083	chr4	151226240	151227759	FALSE	LOW_COUNTS_INDEP_FILTER	8.7	0.0857	0.2478	NA	NA	NA	10.8	2.1	8.1	10.9	7.8	12.6
N084	chr4	151101162	151102870	TRUE	OK	19643.9	0.0013	0.2304	0.7693	-0.073	-0.037	18675.0	27389.1	17526.7	19248.2	16107.2	18917.1
N085	chr4	151103041	151104176	TRUE	OK	35.8	0.00428	0.2591	0.7787	-0.258	-0.129	36.5	57.3	30.2	26.8	32.3	31.9
N086	chr4	151103079	151104176	TRUE	OK	28299.6	0.00229	0.169	0.7438	-0.130	-0.065	26020.8	40781.8	25271.2	26695.1	24279.3	26749.5
N087	chr4	151103079	151104471	FALSE	LOW_COUNTS_INDEP_FILTER	8.7	0.0172	0.7011	NA	NA	NA	6.9	17.7	5.0	6.9	6.9	8.7
N088	chr4	151104286	151104471	TRUE	OK	22613.2	0.00652	0.1577	0.738	-0.228	-0.114	20091.9	34935.3	20210.9	20949.8	18771.8	20719.3

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000109686.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE