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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 176365486 | 176365746 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E002 | chr5 | 176366379 | 176366537 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.397 | 0.4035 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
E003 | chr5 | 176366537 | 176366581 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.854 | 0.7889 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E004 | chr5 | 176368806 | 176368849 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E005 | chr5 | 176368849 | 176368946 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E006 | chr5 | 176368946 | 176368982 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E007 | chr5 | 176368982 | 176369127 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.854 | 0.7889 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E008 | chr5 | 176371721 | 176381909 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0177 | 0.001881 | NA | NA | NA | 4.9 | 8.3 | 8.1 | 15.9 | 7.8 | 11.6 |
E009 | chr5 | 176388294 | 176388638 | TRUE | OK | 1738.7 | 0.00479 | 1.634e-07 | 0.000185 | -1.397 | -0.618 | 1849.8 | 2388.9 | 2186.7 | 1440.5 | 1268.2 | 1298.5 |
E010 | chr5 | 176401740 | 176401865 | TRUE | OK | 15.0 | 0.0264 | 0.0002946 | 0.0641 | 1.510 | 0.755 | 12.8 | 10.4 | 9.1 | 12.9 | 20.6 | 24.2 |
J011 | chr5 | 176365746 | 176366379 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J012 | chr5 | 176366581 | 176368806 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J013 | chr5 | 176368982 | 176371721 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J014 | chr5 | 176368982 | 176388294 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J015 | chr5 | 176368982 | 176401740 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N016 | chr5 | 176384254 | 176385220 | TRUE | OK | 13.9 | 0.0121 | 0.4358 | 0.8347 | -0.285 | -0.142 | 19.7 | 20.9 | 14.1 | 13.9 | 5.9 | 8.7 |
N017 | chr5 | 176384283 | 176385220 | TRUE | OK | 285.2 | 0.00527 | 0.07127 | 0.6649 | -0.267 | -0.133 | 326.4 | 456.7 | 327.3 | 215.4 | 184.1 | 201.1 |
N018 | chr5 | 176384286 | 176385220 | TRUE | OK | 63.5 | 0.00725 | 0.1538 | 0.7361 | -0.308 | -0.154 | 74.9 | 108.4 | 68.5 | 46.7 | 44.1 | 38.7 |
N019 | chr5 | 176384374 | 176385220 | TRUE | OK | 927.1 | 0.011 | 0.0473 | 0.6178 | -0.351 | -0.175 | 1117.1 | 1359.7 | 1082.8 | 730.7 | 621.8 | 650.7 |
N020 | chr5 | 176385327 | 176386839 | TRUE | OK | 1190.2 | 0.0197 | 0.00539 | 0.305 | -0.668 | -0.333 | 1326.2 | 1852.9 | 1453.4 | 952.1 | 754.0 | 802.5 |
N021 | chr5 | 176386909 | 176388234 | TRUE | OK | 1041.2 | 0.0053 | 0.05493 | 0.6372 | -0.257 | -0.128 | 1129.0 | 1506.7 | 1299.3 | 866.7 | 679.6 | 765.7 |
N022 | chr5 | 176386909 | 176388432 | TRUE | OK | 39.1 | 0.00846 | 0.4548 | 0.841 | -0.183 | -0.091 | 44.4 | 45.9 | 60.4 | 27.8 | 22.5 | 33.8 |
N023 | chr5 | 176388343 | 176388432 | TRUE | OK | 1322.9 | 0.00233 | 0.3555 | 0.8092 | 0.095 | 0.047 | 1406.0 | 1822.7 | 1602.5 | 1103.0 | 997.9 | 1005.5 |
N024 | chr5 | 176392932 | 176397943 | TRUE | OK | 94.6 | 0.00584 | 0.0004027 | 0.07798 | 0.641 | 0.320 | 100.6 | 92.8 | 95.7 | 104.2 | 93.0 | 81.2 |
N025 | chr5 | 176392945 | 176396478 | TRUE | OK | 33.4 | 0.021 | 0.03384 | 0.5692 | 0.671 | 0.335 | 40.4 | 38.6 | 21.2 | 37.7 | 30.4 | 31.9 |
N026 | chr5 | 176392945 | 176397606 | FALSE | ALL_ZERO | 9142.0 | NA | NA | NA | NA | NA | 8827.7 | 10154.0 | 8101.1 | 9772.0 | 8634.3 | 9362.8 |
N027 | chr5 | 176396532 | 176397606 | TRUE | OK | 40.6 | 0.0189 | 0.0118 | 0.4134 | 0.765 | 0.382 | 47.3 | 38.6 | 32.2 | 54.6 | 37.2 | 33.8 |
N028 | chr5 | 176397718 | 176397929 | FALSE | ALL_ZERO | 6036.3 | NA | NA | NA | NA | NA | 5823.4 | 7051.9 | 5238.6 | 6275.4 | 5779.7 | 6048.5 |
N029 | chr5 | 176398047 | 176406156 | TRUE | OK | 28.9 | 0.0113 | 0.01014 | 0.3937 | 0.724 | 0.362 | 20.7 | 35.5 | 29.2 | 21.8 | 31.3 | 34.8 |
N030 | chr5 | 176398047 | 176410256 | FALSE | ALL_ZERO | 4513.8 | NA | NA | NA | NA | NA | 4413.4 | 5194.8 | 4097.4 | 4640.3 | 4173.7 | 4563.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000175414.7 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |