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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr9 | 111525158 | 111525188 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.244 | 0.5616 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.9 |
E002 | chr9 | 111525188 | 111525215 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0706 | 0.9339 | NA | NA | NA | 3.0 | 2.1 | 2.0 | 1.0 | 4.9 | 1.9 |
E003 | chr9 | 111525215 | 111525232 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.4 | 0.0333 | 0.1249 | NA | NA | NA | 3.0 | 2.1 | 3.0 | 6.0 | 7.8 | 4.8 |
E004 | chr9 | 111525232 | 111525262 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.1 | 0.0339 | 0.3604 | NA | NA | NA | 5.9 | 5.2 | 10.1 | 15.9 | 10.8 | 6.8 |
E005 | chr9 | 111527267 | 111527807 | TRUE | OK | 38.2 | 0.0084 | 0.2182 | 0.7642 | -0.330 | -0.165 | 44.4 | 29.2 | 42.3 | 37.7 | 28.4 | 47.4 |
E006 | chr9 | 111527807 | 111528020 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0469 | 0.8863 | NA | NA | NA | 3.0 | 4.2 | 10.1 | 6.0 | 3.9 | 8.7 |
E007 | chr9 | 111530874 | 111530963 | TRUE | OK | 12.8 | 0.0135 | 0.003536 | 0.2522 | -1.166 | -0.583 | 18.7 | 15.6 | 15.1 | 7.9 | 8.8 | 10.6 |
E008 | chr9 | 111533738 | 111533865 | TRUE | OK | 19.0 | 0.01 | 2.361e-05 | 0.01076 | -1.443 | -0.721 | 27.6 | 22.9 | 26.2 | 9.9 | 12.7 | 14.5 |
E009 | chr9 | 111534260 | 111534353 | TRUE | OK | 13.3 | 0.0117 | 0.009176 | 0.381 | -1.009 | -0.504 | 16.8 | 14.6 | 18.1 | 9.9 | 9.8 | 10.6 |
E010 | chr9 | 111539445 | 111539761 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.129 | 0.427 | NA | NA | NA | 3.0 | 10.4 | 3.0 | 5.0 | 2.9 | 3.9 |
E011 | chr9 | 111541656 | 111544432 | TRUE | OK | 83.7 | 0.0131 | 0.03922 | 0.5905 | 0.546 | 0.272 | 85.8 | 48.0 | 79.6 | 100.3 | 95.0 | 93.8 |
E012 | chr9 | 111576364 | 111577844 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.0447 | 0.5258 | NA | NA | NA | 4.9 | 10.4 | 4.0 | 8.9 | 8.8 | 10.6 |
J013 | chr9 | 111525262 | 111527267 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.0314 | 0.4667 | NA | NA | NA | 5.9 | 5.2 | 10.1 | 15.9 | 8.8 | 6.8 |
J014 | chr9 | 111527807 | 111530874 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.8 | 0.034 | 0.1169 | NA | NA | NA | 13.8 | 11.5 | 6.0 | 5.0 | 6.9 | 9.7 |
J015 | chr9 | 111530963 | 111533738 | TRUE | OK | 9.9 | 0.0138 | 0.0002191 | 0.05271 | -1.670 | -0.835 | 15.8 | 14.6 | 12.1 | 5.0 | 6.9 | 4.8 |
J016 | chr9 | 111533865 | 111534260 | TRUE | OK | 11.5 | 0.00917 | 0.001791 | 0.1799 | -1.261 | -0.630 | 15.8 | 12.5 | 17.1 | 6.9 | 7.8 | 8.7 |
J017 | chr9 | 111534353 | 111539445 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.233 | 0.1167 | NA | NA | NA | 3.0 | 9.4 | 2.0 | 3.0 | 0.0 | 1.9 |
J018 | chr9 | 111534353 | 111541656 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.13 | 0.8373 | NA | NA | NA | 4.9 | 0.0 | 10.1 | 4.0 | 5.9 | 3.9 |
J019 | chr9 | 111534353 | 111576364 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0636 | 0.03669 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 2.0 | 2.0 | 3.9 |
N020 | chr9 | 111563231 | 111564156 | TRUE | OK | 151.8 | 1.15 | 0.0435 | 0.6055 | -2.824 | -1.369 | 130.2 | 243.0 | 156.1 | 110.2 | 126.3 | 145.0 |
N021 | chr9 | 111563231 | 111570090 | FALSE | ALL_ZERO | 645.7 | NA | NA | NA | NA | NA | 656.7 | 905.1 | 597.3 | 600.6 | 512.2 | 602.3 |
N022 | chr9 | 111564262 | 111570090 | TRUE | OK | 139.7 | 0.243 | 0.004641 | 0.2856 | -2.435 | -1.191 | 138.0 | 201.2 | 130.9 | 121.1 | 108.7 | 138.3 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000173258.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |