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Normalized Counts Table (ENSG00000093183.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr3	42547968	42547970	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.279	0.6548	NA	NA	NA	1.0	2.1	0.0	0.0	0.0	1.9
E002	chr3	42547970	42548003	TRUE	OK	49.4	0.0378	0.2729	0.783	-0.435	-0.217	41.4	82.4	46.3	34.7	41.1	50.3
E003	chr3	42548003	42548182	TRUE	OK	263.7	0.0255	0.3529	0.8083	-0.284	-0.142	263.3	378.5	222.6	223.4	253.6	240.7
E004	chr3	42548182	42548657	TRUE	OK	975.5	0.0183	0.5701	0.8782	-0.137	-0.068	904.2	1213.7	919.6	941.2	955.8	918.5
E005	chr3	42548657	42553448	TRUE	OK	2737.1	0.00499	0.4672	0.8451	-0.095	-0.048	3007.3	2365.9	2965.3	2686.5	2568.7	2829.0
E006	chr3	42555929	42555930	TRUE	OK	385.9	0.00641	0.6566	0.9065	-0.059	-0.030	402.3	401.4	374.7	428.9	341.8	366.4
E007	chr3	42555930	42555995	TRUE	OK	518.3	0.00659	0.4805	0.8496	-0.097	-0.048	549.2	543.3	507.6	566.9	457.3	485.4
E008	chr3	42557577	42557696	TRUE	OK	665.7	0.00288	0.6742	0.9117	-0.040	-0.020	694.2	658.0	666.8	703.9	614.0	657.4
E009	chr3	42561114	42561116	FALSE	LOW_COUNTS_INDEP_FILTER	1.1	0.119	0.08187	NA	NA	NA	0.0	0.0	1.0	1.0	2.0	2.9
E010	chr3	42561116	42561214	TRUE	OK	664.1	0.00273	0.9841	0.9961	0.002	0.001	721.8	625.6	640.6	698.9	620.9	676.8
E011	chr3	42561214	42561296	TRUE	OK	721.0	0.00179	0.09155	0.6905	0.141	0.071	757.3	618.3	692.0	762.5	707.0	788.9
E012	chr3	42563522	42563523	TRUE	OK	510.1	0.0036	0.1472	0.7334	0.160	0.080	560.1	418.1	472.4	529.2	505.3	575.3
E013	chr3	42563523	42563544	TRUE	OK	526.9	0.00424	0.184	0.7504	0.155	0.077	586.7	426.5	488.5	547.0	521.0	591.7
E014	chr3	42563544	42563546	TRUE	OK	486.9	0.00357	0.09877	0.6969	0.183	0.091	534.4	397.3	442.2	511.3	494.5	541.4
E015	chr3	42563546	42563608	TRUE	OK	657.0	0.00334	0.04797	0.6201	0.210	0.105	702.0	528.7	611.4	678.1	664.9	757.0
E016	chr3	42563608	42563632	TRUE	OK	581.9	0.00397	0.1723	0.7451	0.152	0.076	634.0	453.6	573.1	588.7	584.6	657.4
E017	chr3	42563632	42563686	TRUE	OK	716.2	0.00494	0.06955	0.6618	0.220	0.110	736.5	534.9	731.2	707.9	758.0	828.6
E018	chr3	42563764	42563844	TRUE	OK	52.1	0.00522	0.382	0.8177	-0.180	-0.090	50.3	50.1	65.5	45.7	54.8	46.4
E019	chr3	42563844	42563880	TRUE	OK	44.0	0.0135	0.9596	0.9906	-0.016	-0.008	37.5	39.6	55.4	51.6	46.0	33.8
E020	chr3	42563880	42563888	TRUE	OK	35.7	0.0194	0.94	0.9858	-0.008	-0.004	31.6	34.4	41.3	49.6	28.4	29.0
E021	chr3	42563888	42563926	TRUE	OK	40.5	0.0217	0.4398	0.8361	0.237	0.119	27.6	35.5	48.3	56.6	38.2	36.7
E022	chr3	42563926	42563980	TRUE	OK	43.1	0.0278	0.2981	0.7912	0.333	0.167	26.6	34.4	53.4	61.6	43.1	39.6
E023	chr3	42563980	42564415	TRUE	OK	22.2	0.0307	0.6492	0.9042	0.165	0.083	14.8	16.7	31.2	18.9	19.6	31.9
E024	chr3	42565775	42565883	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0911	0.4435	NA	NA	NA	8.9	2.1	7.1	3.0	9.8	13.5
E025	chr3	42566743	42566836	TRUE	OK	10.8	0.0152	0.383	0.8181	-0.362	-0.181	12.8	9.4	14.1	6.0	10.8	11.6
E026	chr3	42568864	42569073	TRUE	OK	1016.6	0.00299	0.01067	0.401	0.248	0.124	1015.6	784.1	1032.4	1046.4	1101.7	1119.6
E027	chr3	42573399	42573547	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.164	0.6819	NA	NA	NA	1.0	0.0	2.0	1.0	0.0	1.0
E028	chr3	42579476	42579593	TRUE	OK	16.0	0.0203	0.1075	0.7053	0.590	0.295	18.7	5.2	14.1	20.8	19.6	17.4
E029	chr3	42580442	42580505	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0653	0.4511	NA	NA	NA	14.8	5.2	6.0	8.9	2.9	6.8
E030	chr3	42581311	42581365	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0543	0.3465	NA	NA	NA	2.0	1.0	4.0	6.0	3.9	1.9
E031	chr3	42581845	42581901	TRUE	OK	351.1	0.00147	0.01008	0.393	0.232	0.116	336.2	282.6	353.5	371.3	380.9	381.9
E032	chr3	42581901	42581942	TRUE	OK	225.4	0.00182	0.005502	0.3076	0.295	0.147	212.0	177.3	219.6	244.2	254.6	244.6
E033	chr3	42581942	42581943	TRUE	OK	91.2	0.00288	0.2122	0.7623	0.190	0.095	90.7	77.2	87.6	101.3	88.1	102.5
E034	chr3	42581943	42581950	TRUE	OK	77.0	0.00332	0.2351	0.7708	0.196	0.098	75.9	62.6	76.5	80.4	74.4	91.8
E035	chr3	42581950	42581951	TRUE	OK	57.6	0.00454	0.9283	0.9831	0.017	0.009	63.1	50.1	58.4	57.6	49.0	67.7
E036	chr3	42581951	42581960	TRUE	OK	58.1	0.00473	0.8298	0.9576	0.042	0.021	64.1	50.1	57.4	57.6	49.9	69.6
E037	chr3	42581960	42581962	TRUE	OK	30.0	0.0088	0.8324	0.9585	0.061	0.031	25.6	29.2	33.2	26.8	25.5	39.6
E038	chr3	42581962	42581967	TRUE	OK	29.5	0.00919	0.8765	0.9701	0.047	0.023	24.7	29.2	33.2	25.8	25.5	38.7
E039	chr3	42581967	42581987	TRUE	OK	20.2	0.00891	0.1225	0.7182	0.478	0.239	17.7	17.7	15.1	22.8	19.6	28.0
E040	chr3	42581987	42582023	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0195	0.4624	NA	NA	NA	6.9	4.2	7.1	7.9	7.8	7.7
E041	chr3	42582023	42582028	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0535	0.7373	NA	NA	NA	2.0	2.1	4.0	1.0	3.9	4.8
E042	chr3	42582192	42582327	TRUE	OK	80.2	0.0036	0.05353	0.6339	0.320	0.160	72.0	61.5	80.6	80.4	86.2	100.6
E043	chr3	42587410	42587562	TRUE	OK	11.7	0.0267	0.2928	0.7896	-0.469	-0.234	10.8	19.8	10.1	8.9	9.8	10.6
E044	chr3	42600410	42600524	TRUE	OK	9.8	0.0169	0.8199	0.9551	0.097	0.049	11.8	10.4	6.0	10.9	8.8	10.6
E045	chr3	42600959	42601080	TRUE	OK	138.9	0.0234	0.05341	0.6337	0.481	0.240	136.1	65.7	147.1	160.8	145.9	177.9
J046	chr3	42548657	42555929	TRUE	OK	193.1	0.0106	0.5532	0.8728	-0.108	-0.054	195.2	221.1	183.3	216.4	176.3	166.3
J047	chr3	42548657	42557577	FALSE	LOW_COUNTS_INDEP_FILTER	4.6	0.02	0.7884	NA	NA	NA	5.9	4.2	3.0	5.0	4.9	4.8
J048	chr3	42553448	42555929	TRUE	OK	185.5	0.00384	0.9532	0.9892	0.011	0.005	197.2	172.0	184.3	205.5	155.7	198.2
J049	chr3	42555995	42557577	TRUE	OK	369.2	0.00575	0.5691	0.8778	-0.075	-0.037	386.5	385.8	360.6	406.1	324.1	351.9
J050	chr3	42557696	42561116	TRUE	OK	460.1	0.00182	0.5351	0.8672	-0.055	-0.028	491.0	444.2	467.4	483.5	415.2	459.2
J051	chr3	42561296	42563522	TRUE	OK	500.4	0.00288	0.1064	0.7042	0.166	0.083	544.3	410.8	465.3	517.2	496.5	568.5
J052	chr3	42563686	42563764	TRUE	OK	38.8	0.00381	0.2086	0.7609	-0.274	-0.137	41.4	36.5	49.4	32.8	39.2	33.8
J053	chr3	42563686	42566743	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.126	0.5812	NA	NA	NA	3.9	1.0	2.0	0.0	1.0	3.9
J054	chr3	42563686	42568864	TRUE	OK	523.3	0.00612	0.0262	0.532	0.306	0.153	527.5	371.2	518.7	514.3	571.9	636.2
J055	chr3	42563880	42568864	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.154	0.3689	NA	NA	NA	1.0	0.0	0.0	1.0	2.0	0.0
J056	chr3	42563888	42568864	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.026	0.4149	NA	NA	NA	6.9	4.2	3.0	2.0	3.9	3.9
J057	chr3	42563980	42565775	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.266	0.9894	NA	NA	NA	1.0	0.0	0.0	1.0	0.0	0.0
J058	chr3	42563980	42566743	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0789	0.7573	NA	NA	NA	0.0	1.0	2.0	1.0	1.0	1.9
J059	chr3	42563980	42568864	TRUE	OK	26.0	0.0194	0.1084	0.706	0.531	0.266	16.8	18.8	28.2	40.7	26.4	25.1
J060	chr3	42565883	42568864	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.169	0.9952	NA	NA	NA	2.0	0.0	0.0	1.0	1.0	0.0
J061	chr3	42566836	42568864	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0207	0.1687	NA	NA	NA	8.9	6.3	5.0	4.0	2.0	5.8
J062	chr3	42569073	42573399	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.146	0.3434	NA	NA	NA	1.0	0.0	2.0	1.0	0.0	0.0
J063	chr3	42569073	42579476	TRUE	OK	11.2	0.0423	0.1176	0.7138	0.739	0.370	12.8	2.1	10.1	14.9	16.6	10.6
J064	chr3	42569073	42580442	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0564	0.5325	NA	NA	NA	12.8	5.2	5.0	8.9	2.9	5.8
J065	chr3	42569073	42581845	TRUE	OK	328.8	0.00129	0.009097	0.3795	0.233	0.116	304.7	272.1	333.4	336.6	369.2	356.8
J066	chr3	42569073	42582192	TRUE	OK	52.8	0.00293	0.03148	0.5589	0.401	0.200	42.4	41.7	52.4	56.6	58.8	64.8
J067	chr3	42569073	42587410	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.5783	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J068	chr3	42569073	42600959	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.158	0.1088	NA	NA	NA	0.0	0.0	0.0	1.0	1.0	1.0
J069	chr3	42573547	42581311	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J070	chr3	42579593	42581845	FALSE	LOW_COUNTS_INDEP_FILTER	8.0	0.0329	0.01653	NA	NA	NA	5.9	1.0	7.1	12.9	6.9	14.5
J071	chr3	42580505	42581845	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.451	0.1911	NA	NA	NA	9.9	1.0	3.0	4.0	0.0	0.0
J072	chr3	42581365	42581845	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.158	0.1895	NA	NA	NA	0.0	1.0	1.0	5.0	1.0	1.0
J073	chr3	42587562	42600410	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N074	chr3	42561296	42568864	TRUE	OK	11.1	0.00923	0.8193	0.955	-0.092	-0.046	12.8	8.3	13.1	11.9	9.8	10.6
N075	chr3	42569073	42600996	TRUE	OK	18.6	0.00677	0.004873	0.2926	0.877	0.439	11.8	11.5	16.1	19.9	27.4	25.1
N076	chr3	42590966	42591524	TRUE	OK	377.7	0.00278	0.0007452	0.1118	-0.361	-0.181	430.9	392.1	440.2	352.4	286.9	363.5
N077	chr3	42591601	42594421	TRUE	OK	458.6	0.00324	2.381e-05	0.01081	-0.465	-0.232	535.4	503.6	536.8	422.9	338.8	413.8
N078	chr3	42600778	42600983	TRUE	OK	60.7	0.0284	0.6461	0.9031	0.089	0.045	59.2	32.3	84.6	64.5	54.8	68.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000093183.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE