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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 78991715 | 78991716 | TRUE | OK | 10.7 | 0.0553 | 0.6337 | 0.8989 | -0.313 | -0.156 | 7.9 | 20.9 | 7.1 | 9.9 | 7.8 | 10.6 |
E002 | chr17 | 78991716 | 78991719 | TRUE | OK | 10.9 | 0.0532 | 0.6964 | 0.9187 | -0.263 | -0.132 | 7.9 | 20.9 | 7.1 | 9.9 | 8.8 | 10.6 |
E003 | chr17 | 78991719 | 78992140 | TRUE | OK | 713.3 | 0.0343 | 0.2444 | 0.7737 | -0.424 | -0.212 | 611.3 | 1156.4 | 653.7 | 656.2 | 569.0 | 633.3 |
E004 | chr17 | 78992140 | 78992409 | TRUE | OK | 560.7 | 0.0252 | 0.288 | 0.7878 | -0.329 | -0.164 | 483.1 | 849.8 | 527.8 | 549.0 | 460.3 | 494.1 |
E005 | chr17 | 78992409 | 78992761 | TRUE | OK | 868.3 | 0.00264 | 0.1085 | 0.7061 | -0.154 | -0.077 | 856.8 | 982.2 | 894.4 | 855.8 | 775.6 | 845.0 |
E006 | chr17 | 78992761 | 78993486 | TRUE | OK | 1604.2 | 0.00151 | 0.1593 | 0.7385 | 0.103 | 0.051 | 1605.2 | 1472.3 | 1632.7 | 1686.7 | 1571.7 | 1656.2 |
E007 | chr17 | 78993486 | 78993783 | TRUE | OK | 855.0 | 0.00489 | 0.2503 | 0.7755 | 0.139 | 0.070 | 882.5 | 711.1 | 877.3 | 909.4 | 826.5 | 923.3 |
E008 | chr17 | 78993783 | 78993920 | TRUE | OK | 647.8 | 0.00905 | 0.6384 | 0.9005 | 0.079 | 0.040 | 689.2 | 544.3 | 670.8 | 626.5 | 590.5 | 765.7 |
E009 | chr17 | 78995017 | 78995221 | TRUE | OK | 1025.5 | 0.00617 | 0.637 | 0.9 | 0.064 | 0.032 | 1073.8 | 887.4 | 1072.7 | 1028.5 | 946.0 | 1144.7 |
E010 | chr17 | 78995221 | 78995249 | TRUE | OK | 9.8 | 0.0489 | 0.4192 | 0.8299 | -0.476 | -0.238 | 8.9 | 6.3 | 19.1 | 8.9 | 9.8 | 5.8 |
E011 | chr17 | 78996975 | 78996991 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0684 | 0.8962 | NA | NA | NA | 11.8 | 2.1 | 10.1 | 7.9 | 10.8 | 5.8 |
E012 | chr17 | 78996991 | 78997105 | TRUE | OK | 800.7 | 0.00408 | 0.3965 | 0.8226 | 0.095 | 0.047 | 843.0 | 690.3 | 810.8 | 824.0 | 776.6 | 859.5 |
E013 | chr17 | 78997105 | 78997329 | TRUE | OK | 770.3 | 0.00873 | 0.3511 | 0.8077 | 0.139 | 0.070 | 796.7 | 598.5 | 828.9 | 821.0 | 805.0 | 771.5 |
E014 | chr17 | 78997329 | 78997392 | TRUE | OK | 228.7 | 0.0156 | 0.9116 | 0.9791 | -0.002 | -0.001 | 252.4 | 161.6 | 275.0 | 231.3 | 234.0 | 217.5 |
E015 | chr17 | 78997392 | 78997426 | TRUE | OK | 156.5 | 0.0122 | 0.8655 | 0.9673 | 0.016 | 0.008 | 172.6 | 112.6 | 183.3 | 164.8 | 155.7 | 149.9 |
E016 | chr17 | 78997426 | 78997439 | TRUE | OK | 98.6 | 0.00312 | 0.8886 | 0.9732 | 0.020 | 0.010 | 102.5 | 85.5 | 106.8 | 106.2 | 92.1 | 98.6 |
E017 | chr17 | 78997439 | 78997490 | TRUE | OK | 190.9 | 0.00783 | 0.8032 | 0.9508 | 0.032 | 0.016 | 211.0 | 147.0 | 210.5 | 199.6 | 180.2 | 197.2 |
E018 | chr17 | 78997490 | 78997506 | TRUE | OK | 230.6 | 0.00995 | 0.6471 | 0.9034 | 0.070 | 0.035 | 256.4 | 171.0 | 250.8 | 245.2 | 220.3 | 239.8 |
E019 | chr17 | 78997506 | 78997576 | TRUE | OK | 326.8 | 0.012 | 0.3697 | 0.8134 | 0.157 | 0.078 | 353.0 | 233.6 | 347.5 | 358.4 | 346.7 | 322.0 |
E020 | chr17 | 78997576 | 78997644 | TRUE | OK | 438.2 | 0.00943 | 0.3382 | 0.8035 | 0.154 | 0.077 | 466.4 | 331.6 | 457.3 | 493.4 | 454.4 | 426.4 |
E021 | chr17 | 78997644 | 78997665 | TRUE | OK | 121.6 | 0.00529 | 0.9538 | 0.9893 | 0.011 | 0.006 | 133.1 | 109.5 | 121.9 | 142.0 | 116.5 | 106.4 |
E022 | chr17 | 78997665 | 78997774 | TRUE | OK | 188.9 | 0.00754 | 0.8658 | 0.9673 | 0.026 | 0.013 | 216.9 | 158.5 | 188.4 | 216.4 | 179.2 | 174.0 |
E023 | chr17 | 78997774 | 78997839 | TRUE | OK | 192.2 | 0.00917 | 0.5469 | 0.871 | 0.105 | 0.052 | 218.9 | 151.2 | 188.4 | 219.4 | 170.4 | 205.0 |
E024 | chr17 | 78997839 | 78997963 | TRUE | OK | 544.9 | 0.0114 | 0.1695 | 0.7442 | 0.239 | 0.120 | 553.2 | 387.9 | 578.1 | 628.4 | 565.0 | 556.9 |
E025 | chr17 | 78998147 | 78998228 | TRUE | OK | 97.0 | 0.0112 | 0.0007403 | 0.1114 | 0.713 | 0.357 | 84.8 | 51.1 | 86.6 | 126.1 | 120.5 | 113.1 |
E026 | chr17 | 78998228 | 78998286 | TRUE | OK | 84.0 | 0.00454 | 8.346e-05 | 0.02744 | 0.677 | 0.338 | 74.0 | 50.1 | 71.5 | 104.2 | 102.8 | 101.5 |
E027 | chr17 | 78998286 | 78998293 | TRUE | OK | 16.4 | 0.061 | 0.5387 | 0.8684 | 0.288 | 0.144 | 9.9 | 10.4 | 24.2 | 10.9 | 25.5 | 17.4 |
E028 | chr17 | 79000099 | 79000270 | TRUE | OK | 178.3 | 0.00982 | 0.1683 | 0.7434 | 0.246 | 0.123 | 191.3 | 124.1 | 177.3 | 205.5 | 186.1 | 185.6 |
E029 | chr17 | 79005371 | 79005481 | TRUE | OK | 31.1 | 0.0861 | 0.1298 | 0.7232 | 0.742 | 0.371 | 30.6 | 7.3 | 32.2 | 30.8 | 31.3 | 54.1 |
E030 | chr17 | 79005956 | 79006213 | TRUE | OK | 19.8 | 0.0274 | 0.1126 | 0.7104 | 0.606 | 0.303 | 22.7 | 9.4 | 15.1 | 26.8 | 16.6 | 28.0 |
E031 | chr17 | 79008062 | 79008171 | TRUE | OK | 15.2 | 0.0568 | 0.9559 | 0.9897 | -0.091 | -0.046 | 15.8 | 6.3 | 25.2 | 18.9 | 13.7 | 11.6 |
E032 | chr17 | 79009663 | 79009764 | TRUE | OK | 318.2 | 0.0105 | 0.08507 | 0.6838 | 0.300 | 0.150 | 322.4 | 216.9 | 325.3 | 358.4 | 337.9 | 348.1 |
E033 | chr17 | 79009764 | 79009765 | TRUE | OK | 38.9 | 0.00508 | 0.8136 | 0.9535 | 0.052 | 0.026 | 42.4 | 37.5 | 35.3 | 38.7 | 39.2 | 40.6 |
E034 | chr17 | 79009765 | 79009767 | TRUE | OK | 38.1 | 0.00501 | 0.8524 | 0.9639 | 0.041 | 0.021 | 40.4 | 37.5 | 35.3 | 37.7 | 39.2 | 38.7 |
E035 | chr17 | 79009767 | 79009778 | TRUE | OK | 36.6 | 0.00525 | 0.7986 | 0.9494 | 0.058 | 0.029 | 40.4 | 33.4 | 34.2 | 37.7 | 36.2 | 37.7 |
E036 | chr17 | 79009778 | 79009780 | TRUE | OK | 18.2 | 0.00927 | 0.2225 | 0.7659 | 0.390 | 0.195 | 17.7 | 13.6 | 16.1 | 22.8 | 21.5 | 17.4 |
E037 | chr17 | 79009780 | 79009793 | TRUE | OK | 13.1 | 0.0114 | 0.8379 | 0.96 | 0.076 | 0.038 | 13.8 | 12.5 | 12.1 | 14.9 | 13.7 | 11.6 |
E038 | chr17 | 79009793 | 79009802 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.047 | 0.6458 | NA | NA | NA | 2.0 | 4.2 | 4.0 | 2.0 | 3.9 | 1.9 |
E039 | chr17 | 79009802 | 79009817 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0779 | 0.7648 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 1.0 | 2.9 | 1.0 |
E040 | chr17 | 79009817 | 79009867 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.382 | 0.2533 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J041 | chr17 | 78992140 | 78992409 | TRUE | OK | 22.8 | 0.00633 | 0.8428 | 0.9613 | -0.056 | -0.028 | 19.7 | 29.2 | 21.2 | 23.8 | 23.5 | 19.3 |
J042 | chr17 | 78992761 | 78996975 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.5695 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J043 | chr17 | 78993920 | 78995017 | TRUE | OK | 449.1 | 0.0117 | 0.758 | 0.9378 | 0.061 | 0.030 | 481.2 | 366.0 | 479.4 | 431.9 | 391.7 | 544.3 |
J044 | chr17 | 78995221 | 78996991 | TRUE | OK | 524.2 | 0.00323 | 0.3421 | 0.8047 | 0.106 | 0.053 | 531.5 | 473.4 | 521.7 | 538.1 | 481.8 | 598.5 |
J045 | chr17 | 78997329 | 78997490 | TRUE | OK | 16.1 | 0.0112 | 0.6187 | 0.894 | 0.176 | 0.088 | 17.7 | 12.5 | 15.1 | 22.8 | 10.8 | 17.4 |
J046 | chr17 | 78997644 | 78997839 | TRUE | OK | 253.8 | 0.0127 | 0.1867 | 0.7516 | 0.250 | 0.125 | 260.3 | 172.0 | 268.9 | 292.9 | 276.2 | 252.3 |
J047 | chr17 | 78997644 | 79009663 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0769 | 0.9785 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 | 1.0 |
J048 | chr17 | 78997774 | 78998147 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0838 | 0.2728 | NA | NA | NA | 1.0 | 2.1 | 2.0 | 2.0 | 0.0 | 0.0 |
J049 | chr17 | 78997963 | 78998147 | TRUE | OK | 54.0 | 0.0121 | 1.579e-05 | 0.007938 | 1.065 | 0.532 | 41.4 | 20.9 | 43.3 | 75.5 | 66.6 | 76.4 |
J050 | chr17 | 78997963 | 79000099 | TRUE | OK | 63.3 | 0.00418 | 0.8035 | 0.9509 | 0.043 | 0.021 | 70.0 | 50.1 | 67.5 | 64.5 | 68.5 | 59.0 |
J051 | chr17 | 78997963 | 79005371 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0212 | 0.0003791 | NA | NA | NA | 2.0 | 0.0 | 3.0 | 7.9 | 6.9 | 10.6 |
J052 | chr17 | 78997963 | 79005956 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J053 | chr17 | 78997963 | 79009663 | TRUE | OK | 191.5 | 0.00859 | 0.1642 | 0.7413 | 0.234 | 0.117 | 177.5 | 137.6 | 216.6 | 222.4 | 191.0 | 204.0 |
J054 | chr17 | 78998286 | 79000099 | TRUE | OK | 32.5 | 0.00647 | 5.095e-05 | 0.01919 | 1.028 | 0.514 | 26.6 | 20.9 | 17.1 | 52.6 | 37.2 | 40.6 |
J055 | chr17 | 78998286 | 79009663 | TRUE | OK | 22.6 | 0.00725 | 0.1082 | 0.7056 | 0.458 | 0.229 | 25.6 | 13.6 | 18.1 | 24.8 | 27.4 | 26.1 |
J056 | chr17 | 79000270 | 79005371 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0855 | 0.899 | NA | NA | NA | 7.9 | 3.1 | 8.1 | 4.0 | 2.9 | 11.6 |
J057 | chr17 | 79000270 | 79009663 | TRUE | OK | 81.8 | 0.00744 | 0.107 | 0.7045 | 0.306 | 0.153 | 89.7 | 56.3 | 74.5 | 89.4 | 91.1 | 89.9 |
J058 | chr17 | 79005481 | 79008062 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.173 | 0.605 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
J059 | chr17 | 79005481 | 79009663 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.0 | 0.201 | 0.7084 | NA | NA | NA | 16.8 | 2.1 | 6.0 | 4.0 | 7.8 | 17.4 |
J060 | chr17 | 79008171 | 79009663 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.1 | 0.337 | 0.8699 | NA | NA | NA | 6.9 | 1.0 | 1.0 | 6.0 | 3.9 | 0.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000171302.17 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |