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Normalized Counts Table (ENSG00000171302.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	78991715	78991716	TRUE	OK	10.7	0.0553	0.6337	0.8989	-0.313	-0.156	7.9	20.9	7.1	9.9	7.8	10.6
E002	chr17	78991716	78991719	TRUE	OK	10.9	0.0532	0.6964	0.9187	-0.263	-0.132	7.9	20.9	7.1	9.9	8.8	10.6
E003	chr17	78991719	78992140	TRUE	OK	713.3	0.0343	0.2444	0.7737	-0.424	-0.212	611.3	1156.4	653.7	656.2	569.0	633.3
E004	chr17	78992140	78992409	TRUE	OK	560.7	0.0252	0.288	0.7878	-0.329	-0.164	483.1	849.8	527.8	549.0	460.3	494.1
E005	chr17	78992409	78992761	TRUE	OK	868.3	0.00264	0.1085	0.7061	-0.154	-0.077	856.8	982.2	894.4	855.8	775.6	845.0
E006	chr17	78992761	78993486	TRUE	OK	1604.2	0.00151	0.1593	0.7385	0.103	0.051	1605.2	1472.3	1632.7	1686.7	1571.7	1656.2
E007	chr17	78993486	78993783	TRUE	OK	855.0	0.00489	0.2503	0.7755	0.139	0.070	882.5	711.1	877.3	909.4	826.5	923.3
E008	chr17	78993783	78993920	TRUE	OK	647.8	0.00905	0.6384	0.9005	0.079	0.040	689.2	544.3	670.8	626.5	590.5	765.7
E009	chr17	78995017	78995221	TRUE	OK	1025.5	0.00617	0.637	0.9	0.064	0.032	1073.8	887.4	1072.7	1028.5	946.0	1144.7
E010	chr17	78995221	78995249	TRUE	OK	9.8	0.0489	0.4192	0.8299	-0.476	-0.238	8.9	6.3	19.1	8.9	9.8	5.8
E011	chr17	78996975	78996991	FALSE	LOW_COUNTS_INDEP_FILTER	8.1	0.0684	0.8962	NA	NA	NA	11.8	2.1	10.1	7.9	10.8	5.8
E012	chr17	78996991	78997105	TRUE	OK	800.7	0.00408	0.3965	0.8226	0.095	0.047	843.0	690.3	810.8	824.0	776.6	859.5
E013	chr17	78997105	78997329	TRUE	OK	770.3	0.00873	0.3511	0.8077	0.139	0.070	796.7	598.5	828.9	821.0	805.0	771.5
E014	chr17	78997329	78997392	TRUE	OK	228.7	0.0156	0.9116	0.9791	-0.002	-0.001	252.4	161.6	275.0	231.3	234.0	217.5
E015	chr17	78997392	78997426	TRUE	OK	156.5	0.0122	0.8655	0.9673	0.016	0.008	172.6	112.6	183.3	164.8	155.7	149.9
E016	chr17	78997426	78997439	TRUE	OK	98.6	0.00312	0.8886	0.9732	0.020	0.010	102.5	85.5	106.8	106.2	92.1	98.6
E017	chr17	78997439	78997490	TRUE	OK	190.9	0.00783	0.8032	0.9508	0.032	0.016	211.0	147.0	210.5	199.6	180.2	197.2
E018	chr17	78997490	78997506	TRUE	OK	230.6	0.00995	0.6471	0.9034	0.070	0.035	256.4	171.0	250.8	245.2	220.3	239.8
E019	chr17	78997506	78997576	TRUE	OK	326.8	0.012	0.3697	0.8134	0.157	0.078	353.0	233.6	347.5	358.4	346.7	322.0
E020	chr17	78997576	78997644	TRUE	OK	438.2	0.00943	0.3382	0.8035	0.154	0.077	466.4	331.6	457.3	493.4	454.4	426.4
E021	chr17	78997644	78997665	TRUE	OK	121.6	0.00529	0.9538	0.9893	0.011	0.006	133.1	109.5	121.9	142.0	116.5	106.4
E022	chr17	78997665	78997774	TRUE	OK	188.9	0.00754	0.8658	0.9673	0.026	0.013	216.9	158.5	188.4	216.4	179.2	174.0
E023	chr17	78997774	78997839	TRUE	OK	192.2	0.00917	0.5469	0.871	0.105	0.052	218.9	151.2	188.4	219.4	170.4	205.0
E024	chr17	78997839	78997963	TRUE	OK	544.9	0.0114	0.1695	0.7442	0.239	0.120	553.2	387.9	578.1	628.4	565.0	556.9
E025	chr17	78998147	78998228	TRUE	OK	97.0	0.0112	0.0007403	0.1114	0.713	0.357	84.8	51.1	86.6	126.1	120.5	113.1
E026	chr17	78998228	78998286	TRUE	OK	84.0	0.00454	8.346e-05	0.02744	0.677	0.338	74.0	50.1	71.5	104.2	102.8	101.5
E027	chr17	78998286	78998293	TRUE	OK	16.4	0.061	0.5387	0.8684	0.288	0.144	9.9	10.4	24.2	10.9	25.5	17.4
E028	chr17	79000099	79000270	TRUE	OK	178.3	0.00982	0.1683	0.7434	0.246	0.123	191.3	124.1	177.3	205.5	186.1	185.6
E029	chr17	79005371	79005481	TRUE	OK	31.1	0.0861	0.1298	0.7232	0.742	0.371	30.6	7.3	32.2	30.8	31.3	54.1
E030	chr17	79005956	79006213	TRUE	OK	19.8	0.0274	0.1126	0.7104	0.606	0.303	22.7	9.4	15.1	26.8	16.6	28.0
E031	chr17	79008062	79008171	TRUE	OK	15.2	0.0568	0.9559	0.9897	-0.091	-0.046	15.8	6.3	25.2	18.9	13.7	11.6
E032	chr17	79009663	79009764	TRUE	OK	318.2	0.0105	0.08507	0.6838	0.300	0.150	322.4	216.9	325.3	358.4	337.9	348.1
E033	chr17	79009764	79009765	TRUE	OK	38.9	0.00508	0.8136	0.9535	0.052	0.026	42.4	37.5	35.3	38.7	39.2	40.6
E034	chr17	79009765	79009767	TRUE	OK	38.1	0.00501	0.8524	0.9639	0.041	0.021	40.4	37.5	35.3	37.7	39.2	38.7
E035	chr17	79009767	79009778	TRUE	OK	36.6	0.00525	0.7986	0.9494	0.058	0.029	40.4	33.4	34.2	37.7	36.2	37.7
E036	chr17	79009778	79009780	TRUE	OK	18.2	0.00927	0.2225	0.7659	0.390	0.195	17.7	13.6	16.1	22.8	21.5	17.4
E037	chr17	79009780	79009793	TRUE	OK	13.1	0.0114	0.8379	0.96	0.076	0.038	13.8	12.5	12.1	14.9	13.7	11.6
E038	chr17	79009793	79009802	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.047	0.6458	NA	NA	NA	2.0	4.2	4.0	2.0	3.9	1.9
E039	chr17	79009802	79009817	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0779	0.7648	NA	NA	NA	1.0	2.1	3.0	1.0	2.9	1.0
E040	chr17	79009817	79009867	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.382	0.2533	NA	NA	NA	0.0	1.0	1.0	0.0	0.0	0.0
J041	chr17	78992140	78992409	TRUE	OK	22.8	0.00633	0.8428	0.9613	-0.056	-0.028	19.7	29.2	21.2	23.8	23.5	19.3
J042	chr17	78992761	78996975	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.5695	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J043	chr17	78993920	78995017	TRUE	OK	449.1	0.0117	0.758	0.9378	0.061	0.030	481.2	366.0	479.4	431.9	391.7	544.3
J044	chr17	78995221	78996991	TRUE	OK	524.2	0.00323	0.3421	0.8047	0.106	0.053	531.5	473.4	521.7	538.1	481.8	598.5
J045	chr17	78997329	78997490	TRUE	OK	16.1	0.0112	0.6187	0.894	0.176	0.088	17.7	12.5	15.1	22.8	10.8	17.4
J046	chr17	78997644	78997839	TRUE	OK	253.8	0.0127	0.1867	0.7516	0.250	0.125	260.3	172.0	268.9	292.9	276.2	252.3
J047	chr17	78997644	79009663	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.0769	0.9785	NA	NA	NA	1.0	1.0	1.0	1.0	1.0	1.0
J048	chr17	78997774	78998147	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0838	0.2728	NA	NA	NA	1.0	2.1	2.0	2.0	0.0	0.0
J049	chr17	78997963	78998147	TRUE	OK	54.0	0.0121	1.579e-05	0.007938	1.065	0.532	41.4	20.9	43.3	75.5	66.6	76.4
J050	chr17	78997963	79000099	TRUE	OK	63.3	0.00418	0.8035	0.9509	0.043	0.021	70.0	50.1	67.5	64.5	68.5	59.0
J051	chr17	78997963	79005371	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0212	0.0003791	NA	NA	NA	2.0	0.0	3.0	7.9	6.9	10.6
J052	chr17	78997963	79005956	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J053	chr17	78997963	79009663	TRUE	OK	191.5	0.00859	0.1642	0.7413	0.234	0.117	177.5	137.6	216.6	222.4	191.0	204.0
J054	chr17	78998286	79000099	TRUE	OK	32.5	0.00647	5.095e-05	0.01919	1.028	0.514	26.6	20.9	17.1	52.6	37.2	40.6
J055	chr17	78998286	79009663	TRUE	OK	22.6	0.00725	0.1082	0.7056	0.458	0.229	25.6	13.6	18.1	24.8	27.4	26.1
J056	chr17	79000270	79005371	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0855	0.899	NA	NA	NA	7.9	3.1	8.1	4.0	2.9	11.6
J057	chr17	79000270	79009663	TRUE	OK	81.8	0.00744	0.107	0.7045	0.306	0.153	89.7	56.3	74.5	89.4	91.1	89.9
J058	chr17	79005481	79008062	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.173	0.605	NA	NA	NA	1.0	0.0	0.0	1.0	1.0	0.0
J059	chr17	79005481	79009663	FALSE	LOW_COUNTS_INDEP_FILTER	9.0	0.201	0.7084	NA	NA	NA	16.8	2.1	6.0	4.0	7.8	17.4
J060	chr17	79008171	79009663	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.337	0.8699	NA	NA	NA	6.9	1.0	1.0	6.0	3.9	0.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000171302.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE