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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr20 | 63743665 | 63743667 | TRUE | OK | 232.0 | 0.00248 | 0.01515 | 0.4496 | -0.307 | -0.153 | 241.6 | 296.1 | 233.7 | 187.6 | 216.4 | 216.6 |
E002 | chr20 | 63743667 | 63744524 | TRUE | OK | 426.9 | 0.00669 | 1.584e-05 | 0.007956 | -0.737 | -0.367 | 424.0 | 577.7 | 439.1 | 331.6 | 398.6 | 390.6 |
E003 | chr20 | 63744524 | 63744681 | TRUE | OK | 16.3 | 0.0117 | 0.203 | 0.7589 | 0.435 | 0.218 | 8.9 | 20.9 | 14.1 | 16.9 | 20.6 | 16.4 |
E004 | chr20 | 63744681 | 63745142 | TRUE | OK | 36.1 | 0.0118 | 0.2415 | 0.7728 | 0.312 | 0.156 | 23.7 | 45.9 | 32.2 | 39.7 | 29.4 | 45.4 |
E005 | chr20 | 63745142 | 63745311 | TRUE | OK | 23.0 | 0.0124 | 0.7762 | 0.9432 | -0.103 | -0.052 | 13.8 | 34.4 | 26.2 | 20.8 | 20.6 | 22.2 |
E006 | chr20 | 63745311 | 63746871 | TRUE | OK | 79.1 | 0.00492 | 0.001082 | 0.138 | 0.607 | 0.304 | 66.1 | 74.0 | 63.5 | 84.4 | 102.8 | 84.1 |
E007 | chr20 | 63746871 | 63747301 | TRUE | OK | 23.2 | 0.0536 | 0.1325 | 0.7246 | 0.681 | 0.341 | 11.8 | 15.6 | 29.2 | 35.7 | 19.6 | 27.1 |
E008 | chr20 | 63752685 | 63752861 | TRUE | OK | 16.5 | 0.0523 | 0.121 | 0.7167 | 0.800 | 0.400 | 16.8 | 9.4 | 12.1 | 22.8 | 10.8 | 27.1 |
E009 | chr20 | 63767268 | 63767982 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.121 | 0.9419 | NA | NA | NA | 3.0 | 9.4 | 3.0 | 4.0 | 1.0 | 8.7 |
E010 | chr20 | 63768072 | 63768118 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.357 | 0.8299 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 2.9 |
E011 | chr20 | 63769249 | 63769383 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.113 | 0.7723 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 1.0 | 0.0 | 1.9 |
E012 | chr20 | 63775255 | 63775401 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.107 | 0.09898 | NA | NA | NA | 3.0 | 3.1 | 1.0 | 10.9 | 2.9 | 3.9 |
E013 | chr20 | 63775677 | 63775962 | TRUE | OK | 38.5 | 0.00827 | 0.002616 | 0.219 | 0.758 | 0.379 | 36.5 | 32.3 | 23.2 | 42.7 | 43.1 | 53.2 |
E014 | chr20 | 63787719 | 63788309 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
E015 | chr20 | 63789820 | 63789859 | TRUE | OK | 23.5 | 0.0098 | 0.2803 | 0.7851 | 0.327 | 0.164 | 26.6 | 22.9 | 16.1 | 21.8 | 27.4 | 26.1 |
E016 | chr20 | 63789859 | 63790790 | TRUE | OK | 59.9 | 0.0118 | 0.168 | 0.7432 | 0.344 | 0.172 | 59.2 | 48.0 | 60.4 | 65.5 | 60.7 | 65.7 |
E017 | chr20 | 63790790 | 63790923 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.85 | 0.5773 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
E018 | chr20 | 63831096 | 63831214 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0307 | 0.003565 | NA | NA | NA | 7.9 | 8.3 | 8.1 | 3.0 | 2.9 | 0.0 |
E019 | chr20 | 63831214 | 63831244 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.4 | 0.0452 | 0.004422 | NA | NA | NA | 4.9 | 5.2 | 7.1 | 2.0 | 1.0 | 0.0 |
E020 | chr20 | 63831948 | 63832038 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J021 | chr20 | 63744681 | 63745142 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.265 | 0.2265 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
J022 | chr20 | 63745311 | 63746871 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.169 | 0.6206 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 1.0 | 0.0 |
J023 | chr20 | 63747301 | 63752685 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.1 | 0.0193 | 0.3826 | NA | NA | NA | 5.9 | 6.3 | 4.0 | 9.9 | 4.9 | 5.8 |
J024 | chr20 | 63752861 | 63775677 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0836 | 0.09016 | NA | NA | NA | 10.8 | 3.1 | 5.0 | 12.9 | 6.9 | 17.4 |
J025 | chr20 | 63767982 | 63768072 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.323 | 0.8123 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 2.9 |
J026 | chr20 | 63768118 | 63769249 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.179 | 0.9966 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 | 1.9 |
J027 | chr20 | 63769383 | 63775677 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.539 | 0.582 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J028 | chr20 | 63775401 | 63775677 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.258 | 0.2286 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
J029 | chr20 | 63775962 | 63789820 | TRUE | OK | 20.9 | 0.00774 | 0.488 | 0.8521 | 0.215 | 0.107 | 23.7 | 21.9 | 15.1 | 16.9 | 25.5 | 22.2 |
J030 | chr20 | 63788309 | 63789820 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J031 | chr20 | 63790790 | 63831096 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.0217 | 0.001569 | NA | NA | NA | 7.9 | 8.3 | 7.1 | 2.0 | 2.9 | 0.0 |
J032 | chr20 | 63790790 | 63831948 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000130584.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |