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Normalized Counts Table (ENSG00000168397.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	241637212	241637611	TRUE	OK	47.0	0.0118	0.08452	0.6828	-0.432	-0.216	58.2	49.0	59.4	42.7	36.2	36.7
E002	chr2	241637611	241637619	TRUE	OK	11.5	0.0316	0.7228	0.9269	-0.154	-0.077	8.9	11.5	17.1	8.9	15.7	6.8
E003	chr2	241637619	241637625	TRUE	OK	11.1	0.0313	0.7208	0.9263	-0.159	-0.080	8.9	10.4	17.1	8.9	14.7	6.8
E004	chr2	241637625	241637634	TRUE	OK	11.3	0.0214	0.6312	0.8981	-0.200	-0.100	8.9	12.5	16.1	8.9	14.7	6.8
E005	chr2	241637634	241637661	TRUE	OK	14.4	0.013	0.5452	0.8703	0.224	0.112	12.8	12.5	16.1	15.9	17.6	11.6
E006	chr2	241637661	241637692	TRUE	OK	24.2	0.015	0.9431	0.9866	-0.021	-0.011	24.7	19.8	31.2	24.8	24.5	20.3
E007	chr2	241637692	241637696	TRUE	OK	30.2	0.0114	0.7565	0.9373	0.090	0.045	32.5	24.0	34.2	30.8	30.4	29.0
E008	chr2	241637696	241637697	TRUE	OK	33.0	0.0097	0.8555	0.9646	-0.045	-0.022	35.5	29.2	39.3	32.8	31.3	30.0
E009	chr2	241637697	241637705	TRUE	OK	81.9	0.00571	0.6539	0.9057	-0.074	-0.037	94.7	82.4	83.6	67.5	82.3	81.2
E010	chr2	241637705	241637706	TRUE	OK	82.3	0.00649	0.6209	0.8948	-0.085	-0.042	96.6	82.4	83.6	67.5	82.3	81.2
E011	chr2	241637706	241637709	TRUE	OK	132.6	0.0123	0.6956	0.9185	-0.083	-0.041	166.6	133.5	122.9	112.2	127.3	133.4
E012	chr2	241637709	241637724	TRUE	OK	376.9	0.00597	0.5271	0.8646	-0.088	-0.044	400.3	399.4	401.9	346.5	362.3	351.0
E013	chr2	241637728	241637760	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.854	0.6105	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E014	chr2	241638260	241638370	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.136	0.2885	NA	NA	NA	0.0	2.1	0.0	1.0	1.0	2.9
E015	chr2	241651006	241651009	FALSE	LOW_COUNTS_INDEP_FILTER	8.5	0.0642	0.3524	NA	NA	NA	9.9	16.7	5.0	6.9	9.8	2.9
E016	chr2	241651009	241651111	TRUE	OK	552.6	0.00752	0.8548	0.9644	-0.027	-0.014	558.1	574.5	597.3	530.1	525.9	529.8
E017	chr2	241651111	241651263	TRUE	OK	17.2	0.0385	0.9615	0.9911	0.059	0.029	22.7	15.6	14.1	11.9	26.4	12.6
E018	chr2	241651263	241651335	TRUE	OK	647.4	0.0095	0.9742	0.9937	-0.005	-0.003	642.9	666.3	705.1	637.4	615.0	617.8
E019	chr2	241651883	241651966	TRUE	OK	42.4	0.0369	0.07684	0.6736	0.624	0.312	32.5	20.9	51.4	43.7	53.9	52.2
E020	chr2	241651966	241651974	TRUE	OK	26.4	0.0333	0.02649	0.534	0.838	0.419	14.8	13.6	31.2	26.8	32.3	39.6
E021	chr2	241651974	241652012	TRUE	OK	23.8	0.0647	0.1072	0.7049	0.715	0.358	13.8	9.4	33.2	22.8	31.3	31.9
E022	chr2	241653306	241653333	TRUE	OK	110.1	0.0182	0.06955	0.6618	0.457	0.228	99.6	74.0	117.8	108.2	125.3	135.4
E023	chr2	241653333	241653369	TRUE	OK	96.0	0.0132	0.03234	0.5626	0.506	0.253	85.8	69.9	93.7	83.4	112.6	130.5
E024	chr2	241653466	241653511	TRUE	OK	17.3	0.0198	0.3343	0.8023	-0.336	-0.168	21.7	21.9	16.1	9.9	22.5	11.6
E025	chr2	241653511	241653524	TRUE	OK	428.9	0.0105	0.6501	0.9044	-0.078	-0.039	461.5	447.3	454.3	413.0	368.2	429.3
E026	chr2	241653524	241653610	TRUE	OK	532.1	0.00872	0.6147	0.8928	-0.080	-0.040	558.1	566.2	566.1	504.3	465.2	532.7
E027	chr2	241654545	241654647	TRUE	OK	604.7	0.0081	0.6814	0.9141	-0.064	-0.032	611.3	649.6	650.7	577.8	534.7	604.3
E028	chr2	241654647	241654705	TRUE	OK	34.9	0.0178	0.8974	0.9755	0.045	0.022	38.5	27.1	41.3	32.8	29.4	40.6
E029	chr2	241654705	241655002	TRUE	OK	52.0	0.0208	0.5666	0.8771	0.172	0.086	58.2	41.7	52.4	57.6	43.1	59.0
E030	chr2	241655270	241655306	TRUE	OK	414.4	0.00486	0.9909	0.9978	0.002	0.001	408.2	447.3	431.1	397.1	383.9	418.6
E031	chr2	241655306	241655330	TRUE	OK	390.5	0.00618	0.9642	0.9917	-0.007	-0.003	375.7	417.1	423.0	380.2	357.4	389.6
E032	chr2	241655330	241655343	TRUE	OK	369.7	0.0049	0.8267	0.9569	-0.029	-0.014	353.0	407.7	397.9	348.5	330.0	380.9
E033	chr2	241655343	241655444	TRUE	OK	14.8	0.0129	0.8083	0.9521	0.090	0.045	13.8	12.5	18.1	15.9	15.7	12.6
E034	chr2	241659107	241659187	TRUE	OK	504.7	0.00399	0.8025	0.9506	-0.030	-0.015	480.2	549.5	552.0	467.6	483.8	495.0
E035	chr2	241659187	241659200	TRUE	OK	47.6	0.00841	0.7691	0.941	0.068	0.034	44.4	45.9	54.4	51.6	46.0	43.5
E036	chr2	241659200	241659448	TRUE	OK	89.6	0.0246	0.8583	0.9654	-0.085	-0.043	73.0	79.2	134.0	77.4	82.3	91.8
E037	chr2	241659448	241659611	TRUE	OK	71.3	0.0216	0.6802	0.9136	-0.108	-0.054	65.1	64.6	99.7	49.6	63.7	85.1
E038	chr2	241659611	241659772	TRUE	OK	62.9	0.0121	0.7106	0.9231	0.103	0.052	61.1	56.3	71.5	52.6	55.8	80.2
E039	chr2	241666595	241666644	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.245	0.4926	NA	NA	NA	1.0	1.0	8.1	7.9	2.0	3.9
E040	chr2	241666644	241666769	TRUE	OK	520.2	0.00149	0.7338	0.9308	-0.024	-0.012	502.9	580.8	543.9	435.8	517.1	540.5
E041	chr2	241666769	241666838	TRUE	OK	416.4	0.00165	0.8196	0.955	-0.016	-0.008	409.2	458.8	432.1	356.4	422.1	419.6
E042	chr2	241667811	241668142	TRUE	OK	47.3	0.0327	0.00174	0.1777	1.110	0.555	42.4	33.4	19.1	47.7	83.2	58.0
E043	chr2	241668142	241668168	TRUE	OK	279.4	0.00216	0.8764	0.9701	0.017	0.009	242.6	341.0	281.0	229.3	279.1	303.6
E044	chr2	241668168	241668221	TRUE	OK	299.1	0.00138	0.1615	0.7398	0.133	0.067	265.2	343.1	284.0	266.1	313.4	322.9
E045	chr2	241668258	241668539	TRUE	OK	21.7	0.0269	0.3787	0.8164	0.345	0.172	13.8	18.8	27.2	15.9	33.3	21.3
E046	chr2	241668539	241668685	TRUE	OK	338.9	0.0021	0.03264	0.5641	0.219	0.109	293.8	375.4	315.3	314.7	340.8	393.5
E047	chr2	241668685	241668860	TRUE	OK	74.8	0.0307	0.02108	0.4999	0.775	0.388	66.1	40.7	67.5	61.6	111.6	101.5
E048	chr2	241670560	241670725	TRUE	OK	63.4	0.00551	1.678e-06	0.001271	0.956	0.478	44.4	53.2	39.3	58.6	92.1	92.8
E049	chr2	241670725	241670782	TRUE	OK	237.4	0.00352	0.3305	0.8011	0.123	0.062	216.9	277.4	215.5	219.4	223.3	271.7
E050	chr2	241671311	241671366	TRUE	OK	251.3	0.00755	0.9748	0.9939	-0.025	-0.012	232.7	343.1	211.5	220.4	240.9	259.1
E051	chr2	241671366	241671405	TRUE	OK	271.8	0.0118	0.9712	0.9931	-0.026	-0.013	246.5	386.8	218.6	240.3	257.6	281.3
E052	chr2	241671405	241671425	TRUE	OK	74.2	0.0109	0.002301	0.2062	0.703	0.352	63.1	66.7	48.3	60.6	101.8	104.4
E053	chr2	241671425	241671441	TRUE	OK	79.7	0.0062	0.0004253	0.08061	0.678	0.339	62.1	76.1	55.4	67.5	106.7	110.2
E054	chr2	241671441	241671569	TRUE	OK	128.2	0.014	0.03276	0.5645	0.518	0.259	96.6	126.2	109.8	90.3	175.3	171.1
E055	chr2	241671569	241671917	TRUE	OK	208.7	0.0198	0.08154	0.6792	0.488	0.244	154.8	210.6	184.3	139.0	276.2	287.2
E056	chr2	241671917	241672190	TRUE	OK	161.0	0.031	0.1285	0.7225	0.551	0.275	117.3	165.8	129.9	95.3	233.1	224.3
E057	chr2	241672190	241672592	TRUE	OK	630.8	0.0162	0.2303	0.7693	-0.311	-0.156	582.7	984.3	558.0	511.3	574.8	573.3
E058	chr2	241672592	241672599	TRUE	OK	93.4	0.00462	0.08089	0.6781	-0.300	-0.150	95.6	135.6	87.6	75.5	82.3	84.1
E059	chr2	241672599	241672628	TRUE	OK	103.5	0.00375	0.1606	0.7393	-0.222	-0.111	108.5	139.7	96.7	87.4	96.9	91.8
E060	chr2	241672628	241672631	TRUE	OK	74.3	0.00368	0.993	0.9982	-0.003	-0.001	71.0	92.8	67.5	69.5	70.5	74.4
E061	chr2	241672631	241673849	TRUE	OK	413.0	0.00266	0.0003028	0.06518	-0.390	-0.195	425.0	577.7	427.1	318.7	358.4	371.3
E062	chr2	241673849	241673854	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.076	0.4481	NA	NA	NA	3.0	1.0	3.0	1.0	1.0	1.9
E063	chr2	241673854	241673857	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0978	0.1413	NA	NA	NA	3.0	1.0	3.0	1.0	0.0	1.0
J064	chr2	241637724	241638260	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J065	chr2	241637724	241651009	TRUE	OK	373.9	0.00532	0.5141	0.8604	-0.087	-0.043	398.3	396.2	396.8	340.5	362.3	349.0
J066	chr2	241637760	241651009	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J067	chr2	241638370	241651009	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J068	chr2	241651111	241651263	TRUE	OK	531.8	0.00738	0.8837	0.972	-0.022	-0.011	525.5	556.8	580.2	516.3	499.4	512.4
J069	chr2	241651111	241653511	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.5396	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J070	chr2	241651335	241651883	FALSE	LOW_COUNTS_INDEP_FILTER	7.3	0.0147	0.9164	NA	NA	NA	8.9	5.2	8.1	6.9	6.9	7.7
J071	chr2	241651335	241653306	TRUE	OK	71.6	0.0181	0.0949	0.6937	0.436	0.218	62.1	49.0	79.6	79.4	76.4	83.1
J072	chr2	241651335	241653511	TRUE	OK	305.7	0.0117	0.3189	0.7972	-0.190	-0.095	337.2	339.9	327.3	301.8	248.7	279.4
J073	chr2	241651974	241653306	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0553	0.1643	NA	NA	NA	3.0	2.1	0.0	3.0	2.0	5.8
J074	chr2	241651974	241653511	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.087	0.4175	NA	NA	NA	1.0	1.0	0.0	2.0	1.0	1.0
J075	chr2	241652012	241653306	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.662	0.3847	NA	NA	NA	0.0	0.0	2.0	0.0	0.0	0.0
J076	chr2	241653369	241653511	TRUE	OK	69.7	0.0156	0.07536	0.6713	0.465	0.233	60.1	50.1	73.5	62.5	74.4	97.7
J077	chr2	241653610	241654545	TRUE	OK	404.8	0.00543	0.9369	0.9851	-0.008	-0.004	403.3	427.5	430.1	382.2	368.2	417.7
J078	chr2	241654647	241655270	TRUE	OK	308.2	0.00363	0.9337	0.9844	0.009	0.005	295.8	343.1	316.3	300.8	285.9	307.5
J079	chr2	241654647	241659107	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.132	0.5582	NA	NA	NA	3.9	4.2	14.1	2.0	8.8	3.9
J080	chr2	241654647	241666644	TRUE	OK	10.6	0.0103	0.5855	0.8832	-0.215	-0.108	12.8	11.5	11.1	10.9	8.8	8.7
J081	chr2	241655343	241659107	TRUE	OK	333.1	0.00435	0.723	0.927	-0.046	-0.023	313.6	375.4	360.6	313.7	293.8	341.3
J082	chr2	241655343	241666644	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.141	0.4562	NA	NA	NA	3.0	1.0	3.0	0.0	6.9	4.8
J083	chr2	241659187	241666644	TRUE	OK	338.4	0.00133	0.8422	0.9612	-0.013	-0.006	336.2	369.1	350.5	286.9	339.8	348.1
J084	chr2	241666838	241668142	TRUE	OK	233.2	0.00289	0.09868	0.6968	-0.200	-0.100	208.0	300.3	261.9	182.7	204.7	241.7
J085	chr2	241668221	241668539	TRUE	OK	220.8	0.00117	0.001766	0.1792	0.314	0.157	183.4	227.3	208.5	213.4	251.7	240.7
J086	chr2	241668685	241670725	TRUE	OK	127.9	0.0125	0.8885	0.9732	0.032	0.016	114.4	155.4	123.9	131.0	96.9	146.0
J087	chr2	241670782	241671311	TRUE	OK	164.4	0.00779	0.5275	0.8648	0.105	0.052	151.8	205.4	137.0	153.9	145.9	192.4
J088	chr2	241671405	241672190	TRUE	OK	162.5	0.0202	0.136	0.7272	-0.442	-0.221	149.9	280.5	145.0	138.0	130.2	131.5
J089	chr2	241671425	241672190	FALSE	LOW_COUNTS_INDEP_FILTER	5.0	0.0218	0.05406	NA	NA	NA	8.9	7.3	5.0	4.0	2.0	2.9
J090	chr2	241671441	241672190	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.0682	0.6344	NA	NA	NA	3.9	1.0	2.0	3.0	4.9	1.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000168397.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE