<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000164068.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr3	49689537	49689543	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0816	0.1177	NA	NA	NA	2.0	2.1	5.0	2.0	1.0	0.0
E002	chr3	49689543	49689556	FALSE	LOW_COUNTS_INDEP_FILTER	7.8	0.0393	0.1761	NA	NA	NA	6.9	8.3	14.1	2.0	7.8	7.7
E003	chr3	49689556	49689561	TRUE	OK	10.2	0.0967	0.2971	0.7909	-0.672	-0.336	4.9	15.6	17.1	3.0	7.8	12.6
E004	chr3	49689561	49689564	TRUE	OK	10.3	0.0759	0.2906	0.7888	-0.612	-0.306	5.9	15.6	16.1	3.0	8.8	12.6
E005	chr3	49689564	49689606	TRUE	OK	87.4	0.00423	0.9151	0.9801	0.019	0.009	96.6	76.1	88.6	83.4	75.4	104.4
E006	chr3	49689606	49689822	TRUE	OK	14.7	0.0107	0.09603	0.6949	0.591	0.296	13.8	12.5	9.1	16.9	16.6	19.3
E007	chr3	49691129	49691165	TRUE	OK	112.7	0.00549	0.8049	0.9512	0.038	0.019	133.1	90.7	110.8	101.3	108.7	131.5
E008	chr3	49691165	49691247	TRUE	OK	173.9	0.00685	0.2322	0.77	0.189	0.095	197.2	129.3	164.2	169.8	175.3	207.9
E009	chr3	49691424	49691509	TRUE	OK	199.0	0.0088	0.5276	0.8648	0.099	0.050	231.7	147.0	200.4	196.6	189.0	229.1
E010	chr3	49697044	49697084	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.231	0.2738	NA	NA	NA	0.0	1.0	0.0	0.0	1.0	2.9
E011	chr3	49697084	49697142	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0501	0.2871	NA	NA	NA	3.0	2.1	5.0	5.0	8.8	2.9
E012	chr3	49697142	49697204	TRUE	OK	170.1	0.00832	0.1834	0.7504	0.222	0.111	190.3	118.9	165.2	178.7	172.4	195.3
E013	chr3	49697204	49697222	TRUE	OK	121.5	0.0123	0.3317	0.8013	0.190	0.095	140.0	81.3	120.9	132.0	113.6	141.2
E014	chr3	49697362	49697412	TRUE	OK	130.9	0.0152	0.4256	0.8315	0.164	0.082	153.8	86.5	131.9	140.0	117.5	155.7
E015	chr3	49697412	49697457	TRUE	OK	129.5	0.0177	0.4806	0.8496	0.169	0.085	150.9	93.8	122.9	149.9	102.8	156.6
E016	chr3	49697884	49697939	TRUE	OK	142.8	0.0135	0.1728	0.7454	0.281	0.140	160.7	93.8	135.0	159.8	133.2	174.0
E017	chr3	49698051	49698137	TRUE	OK	162.4	0.0114	0.0327	0.5643	0.421	0.211	170.6	108.4	142.0	195.6	155.7	202.1
E018	chr3	49698439	49698526	TRUE	OK	176.8	0.00772	0.02683	0.536	0.378	0.189	180.4	135.6	150.1	216.4	170.4	207.9
E019	chr3	49698754	49698822	TRUE	OK	165.0	0.0121	0.1356	0.7269	0.306	0.153	171.6	117.8	157.1	193.6	144.0	205.9
E020	chr3	49698979	49699105	TRUE	OK	186.6	0.0103	0.222	0.7656	0.229	0.115	188.3	136.6	194.4	208.5	164.5	227.2
E021	chr3	49699467	49699582	TRUE	OK	173.3	0.00889	0.06304	0.6524	0.338	0.169	178.5	123.0	162.2	179.7	164.5	232.0
E022	chr3	49699667	49699772	TRUE	OK	187.3	0.00271	0.00189	0.1847	0.382	0.191	187.3	139.7	166.2	198.6	211.5	220.4
E023	chr3	49699772	49700226	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.117	0.5141	NA	NA	NA	3.9	9.4	3.0	2.0	11.8	9.7
E024	chr3	49700226	49700352	TRUE	OK	192.0	0.0126	0.1514	0.7354	0.275	0.137	221.9	136.6	167.2	212.5	220.3	193.4
E025	chr3	49700352	49700471	FALSE	LOW_COUNTS_INDEP_FILTER	9.5	0.0335	0.989	NA	NA	NA	10.8	10.4	7.1	9.9	13.7	4.8
E026	chr3	49700471	49700499	TRUE	OK	129.6	0.0203	0.1122	0.7097	0.379	0.190	153.8	79.2	107.8	141.0	163.5	132.5
E027	chr3	49700499	49700564	TRUE	OK	158.9	0.0187	0.1324	0.7245	0.340	0.170	188.3	99.1	137.0	161.8	198.8	168.2
E028	chr3	49700635	49700709	TRUE	OK	165.0	0.0174	0.3688	0.8131	0.183	0.091	199.2	103.2	164.2	159.8	167.5	196.3
E029	chr3	49701490	49701608	TRUE	OK	180.8	0.0106	0.2416	0.7728	0.215	0.107	186.4	123.0	196.4	176.7	178.2	224.3
E030	chr3	49701810	49701910	TRUE	OK	196.0	0.00726	0.09579	0.6948	0.271	0.135	188.3	142.9	206.5	212.5	187.0	238.8
E031	chr3	49701910	49702082	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.029	0.1953	NA	NA	NA	3.9	9.4	7.1	13.9	9.8	7.7
E032	chr3	49702082	49702110	TRUE	OK	160.5	0.00403	0.04329	0.6049	0.282	0.141	148.9	122.0	167.2	178.7	167.5	178.9
E033	chr3	49702110	49702144	TRUE	OK	164.2	0.00366	0.01945	0.4871	0.318	0.159	147.9	127.2	167.2	186.6	173.3	182.7
E034	chr3	49702333	49702405	TRUE	OK	189.4	0.00661	0.1451	0.7325	0.230	0.115	173.5	151.2	202.5	219.4	182.1	207.9
E035	chr3	49702632	49702753	TRUE	OK	227.6	0.00273	0.02391	0.5187	0.267	0.134	227.8	178.3	219.6	221.4	240.9	277.5
E036	chr3	49703426	49703528	TRUE	OK	194.0	0.00471	0.007235	0.3449	0.386	0.193	200.2	150.2	160.1	189.6	214.5	249.4
E037	chr3	49704649	49704756	TRUE	OK	243.6	0.00389	0.004257	0.2746	0.368	0.184	253.4	186.6	206.5	248.2	270.3	296.8
E038	chr3	49704756	49704983	TRUE	OK	14.7	0.04	0.9379	0.9853	-0.003	-0.002	11.8	8.3	24.2	10.9	17.6	15.5
E039	chr3	49704983	49705081	TRUE	OK	180.2	0.00503	0.03501	0.5744	0.313	0.156	164.7	142.9	179.3	206.5	170.4	217.5
E040	chr3	49705081	49705182	TRUE	OK	197.3	0.00248	0.001131	0.1415	0.388	0.194	185.4	154.3	179.3	226.4	211.5	227.2
E041	chr3	49705182	49705186	FALSE	LOW_COUNTS_INDEP_FILTER	7.3	0.023	0.2128	NA	NA	NA	5.9	8.3	3.0	9.9	8.8	7.7
E042	chr3	49705533	49705679	TRUE	OK	188.0	0.00207	0.006063	0.3215	0.318	0.159	172.6	154.3	180.3	203.5	208.6	208.8
E043	chr3	49705679	49705981	TRUE	OK	24.0	0.00772	0.1337	0.7255	0.427	0.214	19.7	24.0	18.1	25.8	24.5	31.9
E044	chr3	49705981	49706065	TRUE	OK	185.5	0.00243	0.0112	0.4079	0.308	0.154	165.6	159.5	177.3	180.7	220.3	209.8
E045	chr3	49706790	49706898	TRUE	OK	207.4	0.00213	0.002487	0.2143	0.347	0.173	183.4	179.3	191.4	202.5	244.8	242.7
E046	chr3	49712478	49712549	TRUE	OK	156.1	0.00265	0.008531	0.3692	0.341	0.171	144.0	125.1	148.1	147.9	183.1	188.5
E047	chr3	49712549	49712656	TRUE	OK	186.0	0.00233	0.001712	0.1762	0.374	0.187	183.4	141.8	166.2	195.6	209.6	219.5
E048	chr3	49712656	49712829	TRUE	OK	23.4	0.0313	0.191	0.7541	0.503	0.252	24.7	10.4	23.2	16.9	31.3	33.8
E049	chr3	49712829	49712830	TRUE	OK	14.7	0.0277	0.6159	0.8931	0.194	0.097	18.7	6.3	16.1	10.9	16.6	19.3
E050	chr3	49712830	49712892	TRUE	OK	18.3	0.0296	0.7947	0.9484	0.096	0.048	23.7	9.4	20.1	11.9	20.6	24.2
E051	chr3	49712892	49713512	TRUE	OK	53.7	0.00958	0.007065	0.3409	0.622	0.311	55.2	32.3	40.3	53.6	62.7	78.3
E052	chr3	49713512	49713526	TRUE	OK	142.2	0.00363	0.0008201	0.1181	0.474	0.237	144.0	103.2	113.8	151.9	162.6	177.9
E053	chr3	49713526	49713587	TRUE	OK	170.2	0.00417	0.003647	0.2556	0.413	0.206	173.5	136.6	133.0	171.8	189.0	217.5
E054	chr3	49713737	49713825	TRUE	OK	175.8	0.00291	0.000536	0.09248	0.443	0.221	171.6	142.9	138.0	194.6	189.0	218.5
E055	chr3	49713825	49713909	FALSE	LOW_COUNTS_INDEP_FILTER	3.3	0.0424	0.04777	NA	NA	NA	1.0	3.1	1.0	5.0	3.9	5.8
E056	chr3	49713909	49713997	TRUE	OK	143.5	0.0027	0.01361	0.4337	0.328	0.164	137.1	129.3	118.9	154.9	146.9	174.0
E057	chr3	49714089	49714174	TRUE	OK	153.5	0.00217	0.004913	0.2939	0.351	0.175	130.2	137.6	141.0	158.8	174.3	178.9
E058	chr3	49715491	49715574	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.227	0.385	NA	NA	NA	1.0	0.0	0.0	1.0	2.0	0.0
E059	chr3	49715574	49715714	TRUE	OK	162.0	0.00446	0.01275	0.4232	0.363	0.181	136.1	129.3	164.2	163.8	199.8	178.9
E060	chr3	49715821	49715889	TRUE	OK	133.0	0.00746	0.0703	0.6635	0.322	0.161	118.3	102.2	137.0	125.1	172.4	143.1
E061	chr3	49715889	49716010	TRUE	OK	161.6	0.0101	0.5965	0.8868	0.107	0.053	141.0	146.0	182.3	135.0	198.8	166.3
E062	chr3	49716010	49716043	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.1	0.5829	NA	NA	NA	3.0	0.0	1.0	3.0	2.0	1.0
E063	chr3	49716101	49716177	TRUE	OK	150.2	0.00267	0.6314	0.8982	0.061	0.031	137.1	141.8	164.2	147.9	150.8	159.5
E064	chr3	49716392	49716477	TRUE	OK	189.0	0.00505	0.5079	0.8585	0.096	0.048	160.7	198.1	192.4	183.7	204.7	194.3
E065	chr3	49718103	49718262	TRUE	OK	79.1	0.0101	0.1225	0.7182	-0.326	-0.163	73.0	90.7	100.7	52.6	76.4	81.2
E066	chr3	49718391	49718604	TRUE	OK	86.4	0.0111	0.1518	0.7354	-0.323	-0.161	81.8	85.5	120.9	82.4	66.6	81.2
E067	chr3	49720510	49720558	TRUE	OK	330.7	0.011	0.02681	0.536	-0.420	-0.210	339.2	444.2	342.5	251.2	302.6	304.6
E068	chr3	49720558	49720653	TRUE	OK	386.4	0.011	0.01377	0.4357	-0.458	-0.229	411.2	515.1	399.9	280.0	352.5	359.7
E069	chr3	49720799	49720890	TRUE	OK	396.4	0.0075	0.003105	0.2377	-0.468	-0.234	413.1	516.1	434.1	314.7	331.0	369.3
E070	chr3	49720890	49720894	TRUE	OK	276.2	0.00827	0.007181	0.3434	-0.457	-0.228	301.7	367.0	283.0	220.4	225.2	260.1
E071	chr3	49720894	49721019	TRUE	OK	214.7	0.0119	0.0001257	0.03635	-0.767	-0.383	250.4	315.9	237.7	140.0	148.9	195.3
E072	chr3	49721019	49721105	TRUE	OK	345.8	0.00313	0.2073	0.7603	-0.145	-0.072	367.8	384.8	335.4	316.7	322.2	348.1
E073	chr3	49721184	49721526	TRUE	OK	657.0	0.00146	1.736e-06	0.001303	-0.390	-0.195	757.3	727.8	708.1	556.0	570.9	621.7
E074	chr3	49721526	49721527	TRUE	OK	176.6	0.00589	0.0005887	0.09795	-0.543	-0.271	240.6	204.4	180.3	130.1	138.1	166.3
E075	chr3	49721527	49721529	TRUE	OK	174.8	0.00434	0.0001468	0.04037	-0.545	-0.272	233.7	201.2	184.3	133.0	133.2	163.4
J076	chr3	49689606	49691129	TRUE	OK	84.8	0.00345	0.8456	0.9621	0.032	0.016	95.6	71.9	84.6	78.4	75.4	102.5
J077	chr3	49689606	49697362	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J078	chr3	49689822	49691129	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0283	0.1177	NA	NA	NA	11.8	3.1	6.0	7.9	12.7	14.5
J079	chr3	49691247	49691424	TRUE	OK	154.3	0.00686	0.2487	0.7752	0.188	0.094	173.5	113.7	148.1	153.9	148.9	187.6
J080	chr3	49691509	49697044	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J081	chr3	49691509	49697142	TRUE	OK	142.7	0.0109	0.2777	0.7841	0.200	0.100	166.6	98.0	136.0	151.9	138.1	165.3
J082	chr3	49697222	49697362	TRUE	OK	102.3	0.0114	0.376	0.8154	0.173	0.086	120.3	68.8	100.7	108.2	96.0	119.9
J083	chr3	49697457	49697884	TRUE	OK	102.3	0.0142	0.3253	0.7996	0.221	0.110	117.3	70.9	96.7	111.2	87.2	130.5
J084	chr3	49697939	49698051	TRUE	OK	116.3	0.0113	0.1129	0.7106	0.323	0.161	129.2	79.2	103.7	129.1	107.7	148.9
J085	chr3	49698137	49698439	TRUE	OK	113.2	0.0124	0.02275	0.511	0.489	0.244	114.4	74.0	96.7	148.9	108.7	136.3
J086	chr3	49698526	49698754	TRUE	OK	113.6	0.00562	0.0772	0.674	0.295	0.148	112.4	91.8	103.7	140.0	107.7	125.7
J087	chr3	49698822	49698979	TRUE	OK	127.0	0.00945	0.1382	0.7287	0.285	0.143	134.1	91.8	119.9	144.0	112.6	159.5
J088	chr3	49699105	49699467	TRUE	OK	104.4	0.0229	0.2599	0.7792	0.315	0.157	100.6	65.7	114.8	112.2	85.2	147.9
J089	chr3	49699582	49699667	TRUE	OK	114.2	0.00284	0.005256	0.3024	0.401	0.201	111.4	86.5	99.7	116.2	118.5	152.8
J090	chr3	49699772	49700226	TRUE	OK	118.1	0.00395	0.1056	0.7032	0.240	0.120	128.2	93.8	104.8	129.1	131.2	121.8
J091	chr3	49700352	49700471	TRUE	OK	105.5	0.0196	0.07328	0.6679	0.433	0.217	121.3	60.5	89.6	122.1	128.3	111.2
J092	chr3	49700564	49700635	TRUE	OK	105.7	0.019	0.3068	0.7935	0.229	0.114	133.1	65.7	94.7	100.3	122.4	118.0
J093	chr3	49700709	49701490	TRUE	OK	125.9	0.0173	0.4605	0.8431	0.155	0.078	144.9	78.2	136.0	121.1	120.5	154.7
J094	chr3	49701608	49701810	TRUE	OK	114.1	0.00993	0.3841	0.8184	0.179	0.090	111.4	86.5	124.9	110.2	99.9	151.8
J095	chr3	49701910	49702082	TRUE	OK	121.5	0.00666	0.07274	0.667	0.303	0.151	118.3	82.4	127.9	135.0	122.4	143.1
J096	chr3	49702144	49702333	TRUE	OK	133.1	0.00415	0.1129	0.7106	0.232	0.116	119.3	107.4	143.0	150.9	137.1	141.2
J097	chr3	49702405	49702632	TRUE	OK	138.5	0.00262	0.3036	0.7926	0.135	0.067	133.1	116.8	148.1	147.9	129.3	155.7
J098	chr3	49702753	49703426	TRUE	OK	130.4	0.00735	0.01479	0.4461	0.437	0.218	134.1	94.9	106.8	122.1	144.0	180.8
J099	chr3	49703528	49704649	TRUE	OK	149.1	0.00317	0.01905	0.484	0.318	0.159	157.8	116.8	126.9	144.9	163.5	184.7
J100	chr3	49704756	49704983	TRUE	OK	123.5	0.00246	0.002577	0.2177	0.410	0.205	117.3	94.9	108.8	140.0	123.4	156.6
J101	chr3	49704756	49705081	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.637	0.7443	NA	NA	NA	3.9	0.0	0.0	1.0	3.9	0.0
J102	chr3	49705182	49705533	TRUE	OK	93.7	0.00346	0.126	0.7208	0.236	0.118	86.8	69.9	102.7	101.3	98.9	102.5
J103	chr3	49705186	49705533	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.0241	0.2838	NA	NA	NA	3.0	7.3	2.0	6.9	5.9	5.8
J104	chr3	49705679	49705981	TRUE	OK	116.4	0.00214	0.002545	0.2165	0.407	0.203	105.5	89.7	107.8	129.1	139.1	127.6
J105	chr3	49706065	49706790	TRUE	OK	128.6	0.0033	0.05796	0.6435	0.275	0.137	111.4	117.8	122.9	114.2	155.7	149.9
J106	chr3	49706898	49712478	TRUE	OK	115.9	0.00215	0.01867	0.4811	0.321	0.161	100.6	104.3	106.8	107.2	135.1	141.2
J107	chr3	49712656	49713512	TRUE	OK	103.2	0.00208	0.0839	0.6819	0.240	0.120	108.5	83.4	93.7	107.2	111.6	115.1
J108	chr3	49712892	49713512	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.0891	0.9101	NA	NA	NA	6.9	0.0	4.0	3.0	3.9	2.9
J109	chr3	49713587	49713737	TRUE	OK	139.6	0.00441	0.0007966	0.1162	0.505	0.252	138.0	112.6	99.7	151.9	151.8	183.7
J110	chr3	49713587	49713909	FALSE	LOW_COUNTS_INDEP_FILTER	0.9	0.2	0.03392	NA	NA	NA	2.0	3.1	0.0	0.0	0.0	0.0
J111	chr3	49713825	49713909	TRUE	OK	103.9	0.00206	0.01157	0.4112	0.353	0.176	99.6	88.6	87.6	114.2	105.8	127.6
J112	chr3	49713997	49714089	TRUE	OK	89.9	0.00223	0.3211	0.7984	0.148	0.074	82.8	92.8	81.6	88.4	94.0	99.6
J113	chr3	49714174	49715491	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J114	chr3	49714174	49715574	TRUE	OK	100.1	0.00201	0.00107	0.1372	0.462	0.231	77.9	83.4	93.7	108.2	115.6	121.8
J115	chr3	49715714	49715821	TRUE	OK	99.7	0.00633	0.02412	0.5199	0.404	0.202	86.8	74.0	98.7	96.3	133.2	109.3
J116	chr3	49716010	49716101	TRUE	OK	96.5	0.00936	0.7748	0.9427	0.053	0.026	76.9	89.7	118.9	83.4	100.9	109.3
J117	chr3	49716177	49716392	TRUE	OK	122.4	0.00183	0.5986	0.8876	0.067	0.034	116.3	118.9	124.9	127.1	120.5	126.7
J118	chr3	49716477	49720510	TRUE	OK	133.2	0.00615	0.972	0.9933	0.005	0.002	118.3	152.2	129.9	124.1	144.0	130.5
J119	chr3	49718262	49718391	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.174	0.6068	NA	NA	NA	0.0	1.0	0.0	1.0	1.0	0.0
J120	chr3	49718604	49720510	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J121	chr3	49720653	49720799	TRUE	OK	121.0	0.0115	0.935	0.9846	-0.005	-0.002	104.5	136.6	123.9	89.4	132.2	139.2
J122	chr3	49720894	49721019	TRUE	OK	105.9	0.00234	0.1222	0.7179	0.219	0.109	97.6	105.3	92.7	107.2	120.5	112.2
J123	chr3	49721105	49721184	TRUE	OK	109.7	0.013	0.01744	0.4715	0.527	0.263	85.8	113.7	73.5	107.2	136.1	142.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000164068.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE