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Normalized Counts Table (ENSG00000167978.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr16	2752625	2752637	TRUE	OK	72.7	0.0356	0.6248	0.8961	-0.182	-0.091	98.6	44.8	77.6	87.4	82.3	45.4
E002	chr16	2752637	2752661	TRUE	OK	111.2	0.0363	0.2706	0.7824	-0.378	-0.189	148.9	73.0	139.0	126.1	116.5	63.8
E003	chr16	2752661	2752674	TRUE	OK	156.0	0.0468	0.1688	0.7438	-0.478	-0.239	211.0	116.8	194.4	184.7	150.8	78.3
E004	chr16	2752674	2752713	TRUE	OK	398.7	0.0539	0.1404	0.7302	-0.510	-0.255	532.4	320.1	494.5	464.6	395.6	184.7
E005	chr16	2752713	2752715	TRUE	OK	386.0	0.0548	0.1358	0.727	-0.513	-0.256	511.7	322.2	471.4	443.8	391.7	175.0
E006	chr16	2752715	2752846	TRUE	OK	813.9	0.0231	0.0523	0.6312	-0.490	-0.245	1056.0	656.9	1017.3	859.8	765.8	527.9
E007	chr16	2752846	2752854	TRUE	OK	118.5	0.0273	0.1477	0.7338	-0.407	-0.203	149.9	105.3	133.0	141.0	100.9	81.2
E008	chr16	2753442	2753645	TRUE	OK	21.4	0.0128	0.2281	0.7684	0.356	0.178	26.6	7.3	19.1	21.8	25.5	28.0
E009	chr16	2756333	2756606	TRUE	OK	1612.0	0.00228	0.3917	0.821	-0.085	-0.042	1815.2	1160.5	1762.6	1554.7	1735.3	1643.6
E010	chr16	2757471	2757475	TRUE	OK	1061.1	0.00406	0.9519	0.9889	-0.008	-0.004	1215.7	720.5	1101.9	1010.7	1101.7	1216.3
E011	chr16	2757475	2757574	TRUE	OK	1604.4	0.0025	0.4529	0.8404	-0.070	-0.035	1816.2	1202.3	1675.0	1489.2	1668.7	1775.1
E012	chr16	2757574	2757579	TRUE	OK	1030.2	0.00295	0.4329	0.8338	-0.075	-0.038	1162.5	792.5	1064.6	924.3	1063.5	1173.7
E013	chr16	2757579	2757780	TRUE	OK	56.9	0.0189	0.4852	0.8513	-0.231	-0.116	61.1	31.3	83.6	46.7	72.5	46.4
E014	chr16	2757780	2757831	TRUE	OK	1352.8	0.00253	0.528	0.8649	-0.062	-0.031	1548.0	981.2	1417.2	1211.2	1426.8	1532.4
E015	chr16	2757831	2757873	TRUE	OK	1146.5	0.00236	0.6199	0.8945	-0.048	-0.024	1303.5	834.2	1190.5	1026.5	1222.1	1302.3
E016	chr16	2757873	2757945	TRUE	OK	1267.0	0.00192	0.9946	0.9986	-0.002	-0.001	1412.0	920.7	1286.2	1153.6	1394.5	1434.8
E017	chr16	2758469	2758524	TRUE	OK	1055.4	0.00157	0.7093	0.9227	-0.027	-0.013	1143.8	797.7	1099.9	955.1	1138.9	1196.9
E018	chr16	2758524	2758547	TRUE	OK	1061.5	0.00208	0.5	0.8556	-0.048	-0.024	1087.6	856.1	1139.2	944.1	1148.7	1193.1
E019	chr16	2758853	2758907	TRUE	OK	14.3	0.135	0.7684	0.9407	-0.073	-0.036	17.7	1.0	23.2	17.9	11.8	14.5
E020	chr16	2758907	2758923	TRUE	OK	13.9	0.145	0.9842	0.9961	-0.313	-0.157	15.8	1.0	27.2	11.9	10.8	16.4
E021	chr16	2758923	2758947	TRUE	OK	16.7	0.0459	0.5617	0.8755	-0.382	-0.191	14.8	7.3	32.2	15.9	13.7	16.4
E022	chr16	2758947	2758984	TRUE	OK	29.0	0.0132	0.08016	0.6774	-0.531	-0.265	34.5	20.9	43.3	28.8	28.4	18.4
E023	chr16	2758984	2759047	TRUE	OK	1354.4	0.00158	0.3749	0.8149	-0.066	-0.033	1460.3	1032.3	1463.5	1237.0	1420.0	1513.1
E024	chr16	2759047	2759139	TRUE	OK	48.7	0.00556	0.7701	0.9412	0.042	0.021	54.2	25.0	57.4	47.7	57.8	50.3
E025	chr16	2759139	2759172	TRUE	OK	1346.0	0.00235	0.5424	0.8696	-0.056	-0.028	1479.0	1006.2	1433.3	1255.9	1386.7	1515.0
E026	chr16	2759172	2759351	TRUE	OK	64.0	0.00492	0.1233	0.719	-0.289	-0.145	66.1	58.4	77.6	60.6	67.6	54.1
E027	chr16	2759351	2759402	TRUE	OK	1593.3	0.00248	0.7055	0.9214	0.022	0.011	1730.4	1102.2	1680.0	1548.8	1695.1	1803.2
E028	chr16	2759402	2759548	TRUE	OK	26.1	0.00707	0.06379	0.6532	-0.499	-0.249	27.6	26.1	34.2	19.9	26.4	22.2
E029	chr16	2759568	2759661	TRUE	OK	1688.6	0.00507	0.6507	0.9047	0.027	0.014	1881.3	1061.5	1832.1	1656.0	1786.2	1914.3
E030	chr16	2759661	2759731	TRUE	OK	177.9	0.0151	0.03687	0.5824	0.444	0.222	167.6	81.3	178.3	166.8	201.7	271.7
E031	chr16	2759731	2759746	TRUE	OK	131.5	0.0266	0.009947	0.3911	0.700	0.350	120.3	42.8	119.9	123.1	170.4	212.7
E032	chr16	2759746	2759843	TRUE	OK	632.6	0.0164	0.001222	0.1476	0.669	0.334	540.3	254.4	590.2	602.6	843.2	964.9
E033	chr16	2759843	2759932	TRUE	OK	326.9	0.0323	0.04805	0.6203	0.521	0.260	326.4	113.7	321.3	319.7	372.1	508.6
E034	chr16	2759932	2760008	TRUE	OK	180.7	0.0307	0.1201	0.716	0.430	0.215	181.4	69.9	185.3	157.9	196.8	293.0
E035	chr16	2760008	2760010	TRUE	OK	46.1	0.0613	0.771	0.9415	0.149	0.074	47.3	18.8	58.4	33.8	34.3	84.1
E036	chr16	2760010	2760032	TRUE	OK	47.8	0.0617	0.802	0.9504	0.157	0.079	50.3	20.9	57.4	35.7	33.3	88.9
E037	chr16	2760032	2760300	TRUE	OK	490.0	0.0178	0.02023	0.494	0.507	0.253	464.4	216.9	467.4	434.8	599.3	757.0
E038	chr16	2760300	2760499	TRUE	OK	1918.3	0.0157	0.6279	0.8971	0.033	0.017	2273.7	1010.4	2130.3	1910.1	1955.6	2229.5
E039	chr16	2760499	2760621	TRUE	OK	21.5	0.0401	0.8339	0.9589	-0.179	-0.089	26.6	7.3	31.2	23.8	16.6	23.2
E040	chr16	2760621	2760845	TRUE	OK	25.4	0.0678	0.7029	0.9207	0.010	0.005	26.6	5.2	40.3	20.8	29.4	30.0
E041	chr16	2760845	2760846	TRUE	OK	11.3	0.164	0.7456	0.9341	0.113	0.057	10.8	1.0	19.1	4.0	15.7	17.4
E042	chr16	2761560	2761698	TRUE	OK	1369.5	0.0173	0.4397	0.8361	0.091	0.046	1601.3	672.6	1510.8	1370.0	1467.9	1594.3
E043	chr16	2761698	2761707	TRUE	OK	886.5	0.0253	0.2689	0.782	0.188	0.094	1032.4	372.3	957.9	893.5	994.0	1069.3
E044	chr16	2761707	2761807	TRUE	OK	1258.0	0.0256	0.1868	0.7516	0.245	0.123	1464.2	520.3	1298.3	1278.7	1454.2	1532.4
E045	chr16	2761807	2761810	TRUE	OK	833.1	0.0279	0.1574	0.738	0.285	0.143	984.0	330.5	823.9	829.0	970.5	1060.6
E046	chr16	2761810	2762211	TRUE	OK	2447.5	0.0208	0.3354	0.8026	0.140	0.070	2854.5	1135.5	2662.1	2444.2	2696.9	2891.8
E047	chr16	2762211	2763501	TRUE	OK	6095.6	0.0241	0.3356	0.8027	0.148	0.074	7097.3	2797.6	6702.1	6099.7	7002.8	6874.2
E048	chr16	2763501	2763582	TRUE	OK	1396.5	0.022	0.2817	0.7854	0.170	0.085	1613.1	617.3	1519.9	1386.9	1598.2	1643.6
E049	chr16	2763582	2763866	TRUE	OK	2439.7	0.0201	0.5634	0.876	0.044	0.022	2833.8	1176.2	2851.4	2437.3	2653.8	2685.9
E050	chr16	2763866	2763938	TRUE	OK	1391.7	0.0171	0.6572	0.9067	0.014	0.007	1632.8	695.5	1625.7	1371.0	1529.6	1495.7
E051	chr16	2763938	2764847	TRUE	OK	5082.1	0.0147	0.5431	0.8697	0.051	0.026	5792.8	2665.2	5814.7	4917.3	5723.9	5578.6
E052	chr16	2764847	2765368	TRUE	OK	3647.6	0.00966	0.4278	0.8323	0.078	0.039	4057.4	2013.5	4072.2	3479.7	4277.5	3985.3
E053	chr16	2765368	2767506	TRUE	OK	11222.6	0.00365	0.4846	0.851	0.046	0.023	12011.6	7232.3	12398.9	10540.4	13012.7	12139.6
E054	chr16	2767506	2767721	TRUE	OK	1884.5	0.000512	0.8706	0.9687	-0.007	-0.004	1977.9	1395.2	2019.5	1697.7	2176.9	2040.0
E055	chr16	2767721	2767855	TRUE	OK	1502.3	0.000599	0.6129	0.8921	0.025	0.013	1582.5	1087.6	1579.3	1363.1	1748.0	1653.3
E056	chr16	2767855	2768080	TRUE	OK	1920.6	0.00213	0.4473	0.8387	-0.051	-0.026	1992.7	1570.3	2018.5	1721.5	2137.8	2082.6
E057	chr16	2768080	2768261	TRUE	OK	1505.7	0.00638	0.2356	0.7709	-0.144	-0.072	1502.7	1388.9	1625.7	1312.5	1607.0	1597.2
E058	chr16	2768504	2768527	TRUE	OK	461.5	0.00975	3.533e-05	0.01448	0.732	0.366	377.6	219.0	384.8	413.0	671.8	702.9
E059	chr16	2768527	2768550	TRUE	OK	487.3	0.011	7.796e-05	0.02612	0.720	0.360	419.1	216.9	405.9	444.8	704.1	732.9
E060	chr16	2768550	2768599	TRUE	OK	573.2	0.0128	0.002073	0.1941	0.604	0.302	498.9	271.1	519.7	485.5	829.4	834.4
E061	chr16	2768599	2768745	TRUE	OK	671.4	0.0206	0.002897	0.2307	0.728	0.364	562.0	277.4	593.3	547.0	1046.9	1001.6
E062	chr16	2768745	2768767	TRUE	OK	360.6	0.0264	0.002397	0.2104	0.828	0.414	313.6	127.2	293.1	299.8	593.4	536.6
E063	chr16	2768767	2768939	TRUE	OK	540.0	0.0156	0.005857	0.3162	0.637	0.319	431.9	286.7	479.4	423.9	886.2	731.9
E064	chr16	2768939	2768996	TRUE	OK	391.8	0.0177	0.03294	0.5653	0.554	0.277	285.0	260.7	354.5	301.8	625.8	523.1
E065	chr16	2768996	2769248	TRUE	OK	2513.9	0.0162	0.09302	0.6916	-0.335	-0.167	2561.7	2783.0	2661.1	2028.3	2541.2	2508.0
E066	chr16	2769248	2769284	TRUE	OK	1845.6	0.02	0.0574	0.6424	-0.433	-0.216	1916.8	2200.1	1950.0	1461.4	1746.1	1799.3
E067	chr16	2769284	2769373	TRUE	OK	446.4	0.0133	0.7458	0.9342	-0.017	-0.008	413.1	394.1	475.4	315.7	539.6	540.5
E068	chr16	2769373	2769422	TRUE	OK	428.6	0.0128	0.8608	0.9661	0.011	0.005	388.5	379.5	451.2	312.7	539.6	499.9
E069	chr16	2769422	2769454	TRUE	OK	435.4	0.0152	0.8367	0.9597	0.100	0.050	390.5	377.5	431.1	313.7	580.7	519.2
E070	chr16	2769454	2769547	TRUE	OK	539.3	0.0194	0.5078	0.8585	0.229	0.115	460.5	439.0	514.7	375.3	759.9	686.5
E071	chr16	2769547	2769627	TRUE	OK	503.9	0.0186	0.07178	0.6657	0.495	0.248	414.1	341.0	432.1	365.3	765.8	704.8
E072	chr16	2769627	2769861	TRUE	OK	799.9	0.0238	0.1253	0.7203	0.488	0.244	619.2	590.2	683.9	569.9	1251.5	1084.8
E073	chr16	2769861	2769894	TRUE	OK	569.1	0.0265	0.4649	0.8444	0.277	0.138	452.6	513.0	499.6	411.0	852.0	686.5
E074	chr16	2769894	2770227	TRUE	OK	1718.7	0.0251	0.9092	0.9785	0.073	0.037	1471.1	1771.6	1540.0	1344.2	2192.6	1992.7
E075	chr16	2770227	2770229	TRUE	OK	529.2	0.038	0.8854	0.9724	-0.010	-0.005	406.2	611.0	499.6	375.3	617.9	665.2
E076	chr16	2770229	2770258	TRUE	OK	739.6	0.0401	0.9863	0.9967	0.053	0.026	564.0	816.4	692.0	492.4	906.8	965.9
E077	chr16	2770258	2770351	TRUE	OK	1149.2	0.0389	0.9605	0.9908	0.074	0.037	904.2	1265.9	1026.4	784.3	1473.8	1440.6
E078	chr16	2770351	2770354	TRUE	OK	2323.0	0.0297	0.2258	0.7673	-0.333	-0.166	2223.4	2897.7	2276.3	1813.8	2348.3	2378.4
E079	chr16	2770354	2770465	TRUE	OK	3322.6	0.033	0.251	0.7756	-0.333	-0.167	3154.2	4194.9	3208.0	2630.9	3412.8	3334.6
E080	chr16	2770603	2770717	TRUE	OK	3923.6	0.0376	0.2133	0.7627	-0.392	-0.196	3738.0	5148.9	3780.1	3077.6	3912.2	3884.7
E081	chr16	2770857	2770910	TRUE	OK	2909.5	0.0351	0.1684	0.7434	-0.424	-0.212	2791.4	3853.9	2864.5	2296.3	2881.0	2770.0
E082	chr16	2770910	2770934	TRUE	OK	2672.9	0.0349	0.167	0.7427	-0.426	-0.213	2539.0	3551.5	2657.1	2111.7	2634.3	2543.7
E083	chr16	2770934	2771049	TRUE	OK	2165.2	0.0357	0.1034	0.7012	-0.514	-0.257	2126.8	2975.9	2180.6	1708.6	1939.0	2060.3
E084	chr16	2771049	2771120	TRUE	OK	984.4	0.0343	0.06583	0.6559	-0.575	-0.287	980.1	1387.9	1016.3	758.5	846.1	917.5
E085	chr16	2771120	2771277	TRUE	OK	1466.6	0.0487	0.1358	0.7272	-0.580	-0.290	1303.5	2257.5	1479.6	1129.8	1345.5	1284.0
E086	chr16	2771277	2771303	TRUE	OK	1087.7	0.0498	0.1285	0.7224	-0.603	-0.301	952.5	1703.8	1112.0	836.9	990.1	931.1
E087	chr16	2771303	2771368	TRUE	OK	992.0	0.0498	0.1394	0.7293	-0.587	-0.294	868.7	1551.6	1002.2	760.5	906.8	862.4
E088	chr16	2771368	2771410	TRUE	OK	291.5	0.0378	0.1309	0.7239	-0.513	-0.257	266.2	420.2	300.2	230.3	263.4	268.8
E089	chr16	2771410	2771412	TRUE	OK	28.5	0.0452	0.167	0.7426	-0.580	-0.290	27.6	43.8	27.2	26.8	22.5	23.2
E090	chr16	2771412	2771603	TRUE	OK	232.0	0.0541	0.3258	0.7998	-0.423	-0.211	203.1	350.4	210.5	226.4	195.9	205.9
E091	chr16	2772321	2772538	TRUE	OK	29.1	0.0494	0.1277	0.722	-0.572	-0.286	33.5	38.6	28.2	10.9	28.4	34.8
J092	chr16	2752846	2756333	TRUE	OK	406.9	0.0311	0.0725	0.6665	-0.518	-0.259	514.7	330.5	532.8	436.8	389.8	236.9
J093	chr16	2752846	2757471	TRUE	OK	139.3	0.0142	0.02133	0.5018	-0.532	-0.266	202.1	112.6	159.1	136.0	123.4	102.5
J094	chr16	2752854	2756333	TRUE	OK	73.8	0.0202	0.172	0.7449	-0.369	-0.185	90.7	63.6	84.6	86.4	61.7	56.1
J095	chr16	2752854	2757471	TRUE	OK	24.3	0.0513	0.3864	0.8191	-0.340	-0.170	24.7	24.0	29.2	34.7	18.6	14.5
J096	chr16	2753645	2756333	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.0327	0.5206	NA	NA	NA	5.9	2.1	5.0	2.0	6.9	1.9
J097	chr16	2756606	2757471	TRUE	OK	854.4	0.00384	0.3249	0.7995	0.099	0.050	935.7	558.9	858.2	804.2	918.6	1051.0
J098	chr16	2757579	2757780	TRUE	OK	998.4	0.00306	0.4311	0.8333	-0.075	-0.038	1129.0	773.7	1024.3	892.5	1025.3	1145.7
J099	chr16	2757945	2758469	TRUE	OK	802.0	0.0012	0.5295	0.8652	0.041	0.021	877.5	567.2	809.8	738.6	901.9	916.6
J100	chr16	2758547	2758984	TRUE	OK	842.8	0.00235	0.3494	0.8072	-0.076	-0.038	858.8	698.6	914.6	757.5	891.1	935.9
J101	chr16	2759047	2759139	TRUE	OK	1097.0	0.00158	0.2695	0.7822	-0.083	-0.041	1171.4	846.7	1205.6	991.8	1132.0	1234.7
J102	chr16	2759172	2759351	TRUE	OK	1228.1	0.00158	0.6265	0.8966	-0.041	-0.020	1346.9	900.9	1308.4	1146.7	1287.8	1377.7
J103	chr16	2759402	2759568	TRUE	OK	1273.0	0.0036	0.3978	0.8232	0.071	0.036	1396.2	829.0	1317.4	1265.8	1357.3	1472.5
J104	chr16	2759661	2759746	TRUE	OK	395.7	0.0117	0.0001003	0.03118	0.719	0.360	319.5	164.7	361.6	377.3	565.0	585.9
J105	chr16	2759661	2760300	TRUE	OK	640.8	0.0171	0.2343	0.7706	-0.305	-0.153	849.9	425.4	754.4	670.1	536.6	608.1
J106	chr16	2760008	2760300	TRUE	OK	61.5	0.0207	0.05588	0.6398	0.527	0.264	63.1	24.0	55.4	51.6	77.4	97.7
J107	chr16	2760499	2761560	TRUE	OK	833.4	0.019	0.5519	0.8724	0.057	0.028	1007.7	411.9	911.5	861.7	866.7	940.7
J108	chr16	2761698	2771303	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.55	0.5115	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J109	chr16	2763938	2764847	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.127	0.07502	NA	NA	NA	1.0	0.0	0.0	0.0	2.9	3.9
J110	chr16	2768261	2768504	TRUE	OK	130.3	0.00523	1.037e-08	1.667e-05	0.935	0.467	90.7	56.3	104.8	130.1	215.4	184.7
J111	chr16	2768261	2768996	TRUE	OK	385.6	0.0129	0.0007258	0.11	-0.656	-0.328	436.8	458.8	464.3	296.8	320.2	336.5
J112	chr16	2768599	2768996	TRUE	OK	39.5	0.0291	0.8615	0.9662	-0.043	-0.022	30.6	48.0	36.3	35.7	46.0	40.6
J113	chr16	2768767	2768996	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0493	0.1005	NA	NA	NA	3.0	0.0	0.0	3.0	3.9	2.9
J114	chr16	2769284	2769627	TRUE	OK	26.7	0.0297	0.1829	0.7502	0.542	0.271	22.7	13.6	25.2	14.9	40.2	43.5
J115	chr16	2769284	2769861	TRUE	OK	116.9	0.0136	0.8849	0.9723	0.081	0.041	115.4	95.9	112.8	84.4	172.4	120.9
J116	chr16	2769284	2770351	TRUE	OK	1061.9	0.0346	0.01403	0.438	-0.768	-0.384	1152.6	1517.2	1181.5	862.7	784.4	873.1
J117	chr16	2770227	2770351	TRUE	OK	300.3	0.0364	0.31	0.7943	-0.330	-0.165	325.4	381.6	252.8	278.0	312.4	251.4
J118	chr16	2770465	2770603	TRUE	OK	2171.6	0.0363	0.3211	0.7984	-0.307	-0.153	2016.4	2787.2	2057.8	1717.5	2215.1	2235.3
J119	chr16	2770717	2770857	TRUE	OK	2328.5	0.0344	0.1946	0.7559	-0.394	-0.197	2267.8	3029.1	2257.2	1839.6	2315.0	2262.4
J120	chr16	2771049	2771120	TRUE	OK	231.9	0.0457	0.2031	0.7589	-0.479	-0.239	209.0	343.1	224.6	172.7	213.5	228.2
J121	chr16	2771049	2771368	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.14	0.4226	NA	NA	NA	0.0	4.2	1.0	2.0	3.9	3.9
J122	chr16	2771603	2772321	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.888	0.3751	NA	NA	NA	0.0	2.1	0.0	0.0	0.0	0.0
N123	chr16	2758547	2758987	TRUE	OK	68.4	0.00566	0.3626	0.8114	-0.164	-0.082	77.9	58.4	70.5	52.6	65.6	85.1
N124	chr16	2770465	2770606	TRUE	OK	131.7	0.0311	0.08597	0.6847	-0.531	-0.266	134.1	179.3	135.0	111.2	109.7	120.9
N125	chr16	2772102	2775450	TRUE	OK	4069.9	0.079	0.3607	0.811	-0.476	-0.238	3618.7	6402.3	3435.6	3782.5	3460.8	3719.4
N126	chr16	2772102	2776992	TRUE	OK	89.7	0.0638	0.3982	0.8234	-0.421	-0.210	80.9	143.9	70.5	72.5	85.2	85.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000167978.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE