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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 111119377 | 111119569 | TRUE | OK | 19.7 | 0.00919 | 1.22e-08 | 1.938e-05 | 2.246 | 1.123 | 5.9 | 3.1 | 4.0 | 36.7 | 35.3 | 32.9 |
E002 | chr2 | 111120913 | 111121188 | TRUE | OK | 175.0 | 0.0132 | 0.843 | 0.9614 | 0.019 | 0.010 | 170.6 | 83.4 | 131.9 | 236.3 | 249.7 | 177.9 |
E003 | chr2 | 111122669 | 111122693 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.303 | 0.7608 | NA | NA | NA | 2.0 | 1.0 | 7.1 | 7.9 | 5.9 | 0.0 |
E004 | chr2 | 111122693 | 111122923 | TRUE | OK | 20.1 | 0.00853 | 0.1486 | 0.7342 | 0.454 | 0.227 | 15.8 | 6.3 | 14.1 | 27.8 | 29.4 | 27.1 |
E005 | chr2 | 111123732 | 111123745 | TRUE | OK | 142.1 | 0.0134 | 0.7743 | 0.9426 | 0.006 | 0.003 | 155.8 | 60.5 | 98.7 | 163.8 | 188.0 | 185.6 |
E006 | chr2 | 111123745 | 111123751 | TRUE | OK | 145.6 | 0.0105 | 0.8386 | 0.9602 | -0.005 | -0.002 | 156.8 | 64.6 | 102.7 | 167.8 | 194.9 | 186.6 |
E007 | chr2 | 111123751 | 111123869 | TRUE | OK | 209.9 | 0.0158 | 0.256 | 0.7777 | 0.191 | 0.095 | 216.9 | 85.5 | 128.9 | 263.1 | 276.2 | 289.1 |
E008 | chr2 | 111123869 | 111123960 | TRUE | OK | 112.2 | 0.00622 | 0.2646 | 0.7807 | 0.187 | 0.093 | 97.6 | 49.0 | 83.6 | 121.1 | 155.7 | 166.3 |
E009 | chr2 | 111123960 | 111124049 | TRUE | OK | 120.7 | 0.0101 | 0.1383 | 0.7288 | 0.285 | 0.143 | 106.5 | 50.1 | 80.6 | 135.0 | 158.6 | 193.4 |
E010 | chr2 | 111124049 | 111124112 | TRUE | OK | 169.2 | 0.00325 | 0.5136 | 0.8603 | 0.083 | 0.042 | 149.9 | 88.6 | 124.9 | 186.6 | 224.3 | 240.7 |
E011 | chr2 | 111124112 | 111124139 | TRUE | OK | 124.3 | 0.00465 | 0.8827 | 0.9717 | -0.023 | -0.011 | 110.4 | 78.2 | 90.7 | 144.0 | 144.0 | 178.9 |
E012 | chr2 | 111128626 | 111128837 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0185 | 0.4375 | NA | NA | NA | 5.9 | 6.3 | 10.1 | 8.9 | 11.8 | 8.7 |
E013 | chr2 | 111128837 | 111128844 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.273 | 0.1219 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 3.0 | 0.0 | 1.9 |
E014 | chr2 | 111130131 | 111130247 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.39 | 0.7042 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 |
E015 | chr2 | 111142312 | 111142391 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.16 | 0.2752 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 3.9 |
E016 | chr2 | 111144487 | 111144520 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.0837 | 0.8227 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 3.0 | 1.0 | 1.9 |
E017 | chr2 | 111145948 | 111146281 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.419 | 0.4553 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 1.0 | 4.8 |
E018 | chr2 | 111146281 | 111146284 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.865 | 0.8875 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
E019 | chr2 | 111150043 | 111150147 | TRUE | OK | 176.9 | 0.00869 | 0.5207 | 0.8625 | 0.113 | 0.056 | 159.7 | 95.9 | 119.9 | 213.4 | 200.8 | 271.7 |
E020 | chr2 | 111151821 | 111151893 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0233 | 0.2703 | NA | NA | NA | 6.9 | 1.0 | 3.0 | 8.9 | 9.8 | 9.7 |
E021 | chr2 | 111153779 | 111153808 | TRUE | OK | 49.3 | 0.0104 | 0.6649 | 0.9089 | 0.103 | 0.052 | 44.4 | 31.3 | 29.2 | 70.5 | 52.9 | 67.7 |
E022 | chr2 | 111153808 | 111153904 | TRUE | OK | 78.3 | 0.00785 | 0.1818 | 0.7497 | 0.266 | 0.133 | 70.0 | 40.7 | 44.3 | 96.3 | 96.0 | 122.8 |
E023 | chr2 | 111161418 | 111161439 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.0318 | 0.2335 | NA | NA | NA | 3.0 | 2.1 | 3.0 | 4.0 | 9.8 | 9.7 |
E024 | chr2 | 111161439 | 111161550 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.5 | 0.0232 | 0.01299 | NA | NA | NA | 2.0 | 2.1 | 4.0 | 8.9 | 16.6 | 11.6 |
E025 | chr2 | 111164132 | 111164231 | TRUE | OK | 234.3 | 0.0112 | 0.2486 | 0.7752 | 0.198 | 0.099 | 207.1 | 99.1 | 174.2 | 270.0 | 294.8 | 360.6 |
E026 | chr2 | 111164231 | 111164352 | TRUE | OK | 246.5 | 0.0108 | 0.1197 | 0.7157 | 0.257 | 0.128 | 212.0 | 94.9 | 186.3 | 306.8 | 328.1 | 351.0 |
E027 | chr2 | 111164352 | 111164643 | TRUE | OK | 311.6 | 0.0126 | 0.5689 | 0.8778 | 0.076 | 0.038 | 267.2 | 136.6 | 268.9 | 396.1 | 374.1 | 426.4 |
E028 | chr2 | 111164643 | 111165048 | TRUE | OK | 296.1 | 0.0102 | 0.5374 | 0.8679 | 0.076 | 0.038 | 262.3 | 127.2 | 249.8 | 345.5 | 395.6 | 396.4 |
E029 | chr2 | 111165048 | 111168444 | TRUE | OK | 1928.2 | 0.00923 | 0.1467 | 0.7333 | -0.206 | -0.103 | 1694.0 | 1270.0 | 1457.5 | 2210.9 | 2534.4 | 2402.6 |
E030 | chr2 | 111168444 | 111168445 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0651 | 0.9603 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 5.0 | 2.0 | 1.9 |
J031 | chr2 | 111119569 | 111123732 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.8668 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J032 | chr2 | 111121188 | 111123732 | TRUE | OK | 106.4 | 0.0103 | 0.6487 | 0.904 | -0.134 | -0.067 | 123.3 | 52.1 | 74.5 | 114.2 | 139.1 | 135.4 |
J033 | chr2 | 111122923 | 111123732 | TRUE | OK | 13.6 | 0.0151 | 0.2898 | 0.7886 | 0.410 | 0.205 | 13.8 | 4.2 | 7.1 | 12.9 | 24.5 | 19.3 |
J034 | chr2 | 111123869 | 111124049 | TRUE | OK | 33.8 | 0.00486 | 0.7021 | 0.9204 | 0.081 | 0.040 | 34.5 | 15.6 | 22.2 | 43.7 | 48.0 | 38.7 |
J035 | chr2 | 111123869 | 111130131 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J036 | chr2 | 111123869 | 111150043 | TRUE | OK | 21.2 | 0.0231 | 0.2332 | 0.7702 | 0.457 | 0.228 | 15.8 | 9.4 | 13.1 | 29.8 | 19.6 | 39.6 |
J037 | chr2 | 111124139 | 111128626 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0423 | 0.6852 | NA | NA | NA | 2.0 | 5.2 | 7.1 | 4.0 | 9.8 | 6.8 |
J038 | chr2 | 111124139 | 111142312 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.8679 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J039 | chr2 | 111124139 | 111144487 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.183 | 0.6171 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 2.0 | 0.0 | 0.0 |
J040 | chr2 | 111124139 | 111150043 | TRUE | OK | 96.7 | 0.00671 | 0.5238 | 0.8634 | 0.118 | 0.059 | 86.8 | 54.2 | 63.5 | 108.2 | 116.5 | 150.8 |
J041 | chr2 | 111124139 | 111153779 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.151 | 0.677 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 2.0 | 0.0 |
J042 | chr2 | 111124139 | 111164132 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.8 | 0.0472 | 0.5192 | NA | NA | NA | 6.9 | 5.2 | 3.0 | 9.9 | 2.9 | 6.8 |
J043 | chr2 | 111130247 | 111150043 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J044 | chr2 | 111142391 | 111144487 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.211 | 0.26 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.9 |
J045 | chr2 | 111144520 | 111145948 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.633 | 0.5915 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.9 |
J046 | chr2 | 111144520 | 111150043 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.321 | 0.3686 | NA | NA | NA | 1.0 | 2.1 | 0.0 | 2.0 | 0.0 | 0.0 |
J047 | chr2 | 111150147 | 111151821 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J048 | chr2 | 111150147 | 111153779 | TRUE | OK | 29.2 | 0.0177 | 0.625 | 0.8962 | 0.159 | 0.079 | 25.6 | 19.8 | 15.1 | 42.7 | 28.4 | 43.5 |
J049 | chr2 | 111150147 | 111161418 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.171 | 0.9436 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
J050 | chr2 | 111150147 | 111164132 | TRUE | OK | 75.3 | 0.0109 | 0.9495 | 0.9882 | 0.005 | 0.003 | 71.0 | 37.5 | 58.4 | 88.4 | 79.3 | 117.0 |
J051 | chr2 | 111151893 | 111153779 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J052 | chr2 | 111153904 | 111164132 | TRUE | OK | 47.2 | 0.0109 | 0.218 | 0.7642 | 0.306 | 0.153 | 42.4 | 21.9 | 27.2 | 51.6 | 59.7 | 80.2 |
J053 | chr2 | 111161550 | 111164132 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.154 | 0.6758 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 1.0 | 0.0 | 1.9 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000153094.23 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |