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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr15 | 32641675 | 32641698 | TRUE | OK | 26.3 | 0.00792 | 7.256e-05 | 0.02488 | 1.115 | 0.557 | 19.7 | 24.0 | 16.1 | 28.8 | 31.3 | 37.7 |
E002 | chr15 | 32641698 | 32641701 | TRUE | OK | 22.6 | 0.00834 | 6.138e-05 | 0.02207 | 1.195 | 0.597 | 14.8 | 19.8 | 15.1 | 25.8 | 30.4 | 30.0 |
E003 | chr15 | 32641701 | 32641778 | TRUE | OK | 28.4 | 0.00967 | 2.892e-05 | 0.01239 | 1.187 | 0.593 | 18.7 | 20.9 | 23.2 | 30.8 | 38.2 | 38.7 |
E004 | chr15 | 32643585 | 32643622 | TRUE | OK | 22.7 | 0.0137 | 0.0424 | 0.6015 | 0.651 | 0.326 | 23.7 | 26.1 | 12.1 | 26.8 | 18.6 | 29.0 |
E005 | chr15 | 32643622 | 32643818 | TRUE | OK | 52.5 | 0.0171 | 0.009464 | 0.3851 | 0.740 | 0.370 | 46.3 | 54.2 | 39.3 | 45.7 | 51.9 | 77.3 |
E006 | chr15 | 32673054 | 32673141 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.397 | 0.8917 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E007 | chr15 | 32677559 | 32677744 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.103 | 0.9293 | NA | NA | NA | 1.0 | 1.0 | 2.0 | 1.0 | 1.0 | 1.0 |
E008 | chr15 | 32679765 | 32679915 | TRUE | OK | 11.1 | 0.0225 | 0.02723 | 0.5388 | 0.986 | 0.493 | 4.9 | 10.4 | 11.1 | 18.9 | 7.8 | 13.5 |
E009 | chr15 | 32684415 | 32684439 | TRUE | OK | 97.5 | 0.0068 | 0.6301 | 0.8977 | -0.072 | -0.036 | 106.5 | 118.9 | 109.8 | 100.3 | 70.5 | 79.3 |
E010 | chr15 | 32684439 | 32684556 | TRUE | OK | 235.7 | 0.00911 | 0.9005 | 0.9763 | 0.001 | 0.001 | 248.5 | 277.4 | 268.9 | 225.4 | 188.0 | 205.9 |
E011 | chr15 | 32684556 | 32684559 | TRUE | OK | 228.7 | 0.00808 | 0.8577 | 0.9652 | -0.007 | -0.003 | 240.6 | 272.1 | 259.9 | 221.4 | 175.3 | 203.0 |
E012 | chr15 | 32684559 | 32684669 | TRUE | OK | 336.7 | 0.00233 | 0.1062 | 0.7038 | -0.187 | -0.093 | 332.3 | 464.0 | 374.7 | 309.8 | 246.8 | 293.0 |
E013 | chr15 | 32691709 | 32691763 | TRUE | OK | 295.7 | 0.00326 | 0.4062 | 0.8257 | -0.110 | -0.055 | 293.8 | 427.5 | 296.1 | 284.9 | 215.4 | 256.2 |
E014 | chr15 | 32691763 | 32691909 | TRUE | OK | 19.8 | 0.019 | 0.3283 | 0.8005 | 0.348 | 0.174 | 23.7 | 25.0 | 11.1 | 20.8 | 14.7 | 23.2 |
E015 | chr15 | 32691909 | 32692308 | TRUE | OK | 22.0 | 0.0268 | 0.6628 | 0.9084 | 0.139 | 0.069 | 21.7 | 36.5 | 13.1 | 16.9 | 16.6 | 27.1 |
E016 | chr15 | 32696513 | 32696626 | TRUE | OK | 334.2 | 0.00414 | 0.01887 | 0.4826 | -0.330 | -0.165 | 341.2 | 505.7 | 342.5 | 297.8 | 228.2 | 290.1 |
E017 | chr15 | 32696626 | 32696889 | TRUE | OK | 325.6 | 0.00494 | 0.02694 | 0.537 | -0.340 | -0.170 | 312.6 | 505.7 | 343.5 | 293.9 | 234.0 | 263.9 |
E018 | chr15 | 32696889 | 32697088 | TRUE | OK | 68.9 | 0.00574 | 0.03641 | 0.5805 | -0.428 | -0.214 | 62.1 | 118.9 | 78.6 | 57.6 | 46.0 | 50.3 |
E019 | chr15 | 32697088 | 32697096 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.1 | 0.186 | 0.2092 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 1.0 | 8.8 | 2.9 |
E020 | chr15 | 32697096 | 32697098 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.396 | 0.2053 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
J021 | chr15 | 32641778 | 32643585 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.4812 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J022 | chr15 | 32643818 | 32679765 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0254 | 0.3045 | NA | NA | NA | 2.0 | 4.2 | 7.1 | 4.0 | 5.9 | 5.8 |
J023 | chr15 | 32673141 | 32679765 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.561 | 0.4743 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J024 | chr15 | 32677744 | 32679765 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.559 | 0.65 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J025 | chr15 | 32679915 | 32684556 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.0595 | 0.08771 | NA | NA | NA | 0.0 | 4.2 | 1.0 | 6.0 | 1.0 | 3.9 |
J026 | chr15 | 32679915 | 32684559 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0253 | 0.005437 | NA | NA | NA | 1.0 | 4.2 | 1.0 | 6.9 | 3.9 | 6.8 |
J027 | chr15 | 32684669 | 32691709 | TRUE | OK | 200.1 | 0.00167 | 0.08913 | 0.6884 | -0.206 | -0.103 | 197.2 | 299.3 | 209.5 | 177.7 | 142.0 | 175.0 |
J028 | chr15 | 32684669 | 32696513 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.027 | 0.3038 | NA | NA | NA | 3.0 | 9.4 | 3.0 | 5.0 | 3.9 | 8.7 |
J029 | chr15 | 32691763 | 32696513 | TRUE | OK | 211.4 | 0.00541 | 0.2392 | 0.7718 | -0.188 | -0.094 | 221.9 | 321.2 | 199.4 | 194.6 | 144.9 | 186.6 |
N030 | chr15 | 32643818 | 32665498 | TRUE | OK | 17.1 | 0.0308 | 0.2965 | 0.7907 | 0.463 | 0.232 | 17.7 | 19.8 | 12.1 | 11.9 | 13.7 | 27.1 |
N031 | chr15 | 32665565 | 32666802 | TRUE | OK | 27.0 | 0.0283 | 0.3702 | 0.8135 | 0.341 | 0.170 | 25.6 | 35.5 | 21.2 | 15.9 | 28.4 | 35.8 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000166922.8 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |