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Normalized Counts Table (ENSG00000131473.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	41866916	41866917	FALSE	LOW_COUNTS_INDEP_FILTER	1.9	0.272	0.9906	NA	NA	NA	0.0	4.2	2.0	3.0	2.0	0.0
E002	chr17	41866917	41866930	TRUE	OK	146.2	0.0316	0.07623	0.6726	-0.577	-0.288	185.4	245.0	141.0	103.3	93.0	109.3
E003	chr17	41866930	41867455	TRUE	OK	4986.1	0.0224	0.2809	0.7852	-0.265	-0.132	5505.9	6923.7	5408.8	3930.5	4042.5	4105.2
E004	chr17	41867455	41867573	TRUE	OK	3033.2	0.0113	0.326	0.7998	-0.166	-0.083	3520.1	3774.6	3311.7	2574.3	2538.3	2479.9
E005	chr17	41867573	41867760	TRUE	OK	4706.0	0.00759	0.4508	0.8397	-0.098	-0.049	5440.8	5418.0	5276.8	4085.3	3966.1	4049.1
E006	chr17	41867760	41867904	TRUE	OK	4923.8	0.00401	0.523	0.8632	-0.057	-0.029	5783.9	5277.2	5637.4	4421.9	4115.9	4306.3
E007	chr17	41868708	41868785	TRUE	OK	4361.2	0.00333	0.6954	0.9185	-0.029	-0.014	5207.1	4578.6	4894.1	3925.5	3683.1	3878.9
E008	chr17	41869042	41869125	TRUE	OK	3343.8	0.00277	0.5982	0.8874	-0.040	-0.020	4055.5	3467.0	3769.0	2954.5	2813.5	3003.0
E009	chr17	41869473	41869587	TRUE	OK	3735.9	0.00228	0.5753	0.8799	-0.039	-0.020	4540.6	3851.8	4219.3	3294.1	3263.0	3246.6
E010	chr17	41870354	41870719	TRUE	OK	25.9	0.0473	0.372	0.8142	0.306	0.153	33.5	9.4	35.3	18.9	28.4	30.0
E011	chr17	41871688	41871832	TRUE	OK	3851.8	0.000976	0.9207	0.9815	0.007	0.004	4807.8	3709.0	4318.0	3543.3	3348.2	3384.9
E012	chr17	41872031	41872182	TRUE	OK	3435.6	0.00111	0.7561	0.9372	0.021	0.010	4235.9	3327.3	3840.5	3095.5	3051.4	3062.9
E013	chr17	41873810	41873965	TRUE	OK	3393.9	0.00176	0.2627	0.7798	-0.081	-0.040	4397.6	3284.6	3909.0	3049.8	2720.4	3002.0
E014	chr17	41878102	41878196	TRUE	OK	3327.7	0.00155	0.1735	0.7455	-0.095	-0.048	4355.2	3163.6	3890.9	3027.0	2657.8	2871.5
E015	chr17	41878796	41878924	TRUE	OK	4146.4	0.00162	0.08184	0.6796	-0.122	-0.061	5413.2	3958.2	4940.4	3774.6	3261.0	3530.9
E016	chr17	41883121	41883232	TRUE	OK	4217.3	0.00124	0.009741	0.3886	-0.159	-0.079	5488.1	4111.4	5098.6	3802.4	3310.9	3492.2
E017	chr17	41884192	41884274	TRUE	OK	3176.6	0.000876	0.4025	0.8248	-0.047	-0.024	4005.2	2942.6	3799.2	2960.5	2644.1	2708.1
E018	chr17	41886111	41886308	TRUE	OK	3595.3	0.00147	0.5701	0.8782	-0.044	-0.022	4602.7	3221.0	4328.0	3357.6	2988.8	3073.6
E019	chr17	41887598	41887703	TRUE	OK	3128.4	0.00289	0.4498	0.8395	0.056	0.028	4035.7	2597.4	3645.1	2970.4	2692.0	2829.9
E020	chr17	41892278	41892447	TRUE	OK	3412.8	0.00254	0.6895	0.9166	0.022	0.011	4388.7	2876.9	4059.1	3160.0	2919.2	3072.6
E021	chr17	41893032	41893174	TRUE	OK	3281.9	0.00285	0.5611	0.8752	0.039	0.020	4173.8	2729.8	3932.2	3012.1	2831.1	3012.7
E022	chr17	41896619	41896649	TRUE	OK	1786.0	0.00586	0.4178	0.8294	0.080	0.040	2340.8	1362.8	2118.2	1703.6	1541.4	1649.4
E023	chr17	41897748	41897800	TRUE	OK	2552.4	0.0058	0.4147	0.8286	0.080	0.040	3338.6	1960.3	3025.7	2418.4	2205.3	2365.8
E024	chr17	41897800	41897839	TRUE	OK	2970.2	0.0101	0.1951	0.7559	0.177	0.089	3905.6	2053.1	3453.8	2882.1	2699.9	2827.0
E025	chr17	41898630	41898785	TRUE	OK	4542.2	0.00996	0.1377	0.7283	0.207	0.104	5895.3	3154.2	5247.6	4351.4	4260.8	4344.0
E026	chr17	41901695	41901813	TRUE	OK	4331.9	0.00996	0.1446	0.7323	0.203	0.101	5682.4	3016.6	4949.5	4137.0	4071.8	4134.2
E027	chr17	41904439	41904728	TRUE	OK	53.9	0.00474	0.6152	0.8929	0.096	0.048	64.1	46.9	63.5	49.6	57.8	41.6
E028	chr17	41904728	41904790	TRUE	OK	3120.5	0.00738	0.1843	0.7505	0.161	0.080	4102.8	2289.8	3547.4	3016.1	2793.9	2973.0
E029	chr17	41905521	41905641	TRUE	OK	3730.0	0.00713	0.2716	0.7828	0.126	0.063	4805.8	2766.3	4438.8	3599.9	3278.6	3490.3
E030	chr17	41905641	41905658	TRUE	OK	2205.5	0.00693	0.386	0.8189	0.095	0.048	2806.2	1652.7	2699.4	2119.6	1875.3	2079.7
E031	chr17	41906527	41906597	TRUE	OK	2694.9	0.00741	0.274	0.7831	0.129	0.064	3469.8	1979.1	3214.0	2624.9	2346.4	2535.0
E032	chr17	41906597	41906646	TRUE	OK	2132.3	0.00881	0.1973	0.7564	0.167	0.083	2755.9	1493.2	2522.1	2085.9	1951.7	1984.9
E033	chr17	41907441	41907572	TRUE	OK	2731.0	0.0107	0.4513	0.8398	0.091	0.046	3649.2	1929.0	3300.7	2732.2	2410.0	2364.9
E034	chr17	41908988	41909068	TRUE	OK	2717.6	0.00852	0.6981	0.9192	0.028	0.014	3655.1	2027.0	3318.8	2654.7	2302.3	2347.5
E035	chr17	41909509	41909700	TRUE	OK	3969.6	0.0107	0.6158	0.8931	0.050	0.025	5308.7	2870.6	4892.1	3944.4	3386.3	3415.8
E036	chr17	41910221	41910238	TRUE	OK	2169.0	0.0136	0.4486	0.8391	0.100	0.050	2952.1	1460.9	2617.8	2191.1	1854.8	1937.5
E037	chr17	41910238	41910284	TRUE	OK	2410.9	0.0135	0.2887	0.7881	0.154	0.077	3237.1	1584.9	2867.6	2361.8	2179.9	2234.4
E038	chr17	41912419	41912542	TRUE	OK	3863.6	0.0154	0.2326	0.7701	0.190	0.095	5150.9	2477.5	4583.9	3818.3	3548.9	3602.4
E039	chr17	41913714	41913896	TRUE	OK	4081.0	0.0141	0.2324	0.7701	0.184	0.092	5332.3	2665.2	4928.3	4003.9	3743.8	3812.2
E040	chr17	41913896	41913900	TRUE	OK	1050.7	0.0104	0.4891	0.8524	0.076	0.038	1404.1	729.9	1293.3	966.0	944.0	966.8
E041	chr17	41918879	41918951	TRUE	OK	2441.6	0.0143	0.2824	0.7857	0.162	0.081	3196.6	1581.8	2990.4	2403.5	2174.0	2303.0
E042	chr17	41918951	41918962	TRUE	OK	306.7	0.00497	0.0001844	0.04723	0.489	0.245	337.2	200.2	331.4	352.4	311.4	307.5
E043	chr17	41918962	41918983	TRUE	OK	251.9	0.00385	2.896e-05	0.0124	0.518	0.259	281.0	165.8	258.9	281.0	275.2	249.4
E044	chr17	41918983	41919019	TRUE	OK	59.1	0.00362	0.06029	0.6489	0.340	0.170	68.0	48.0	60.4	64.5	58.8	55.1
E045	chr17	41919019	41919022	FALSE	LOW_COUNTS_INDEP_FILTER	7.8	0.0188	0.1386	NA	NA	NA	4.9	7.3	8.1	8.9	8.8	8.7
E046	chr17	41930357	41930542	TRUE	OK	21.5	0.0133	0.04339	0.6052	0.639	0.320	25.6	18.8	13.1	19.9	25.5	26.1
J047	chr17	41867904	41868708	TRUE	OK	3266.4	0.00282	0.7635	0.9394	-0.018	-0.009	3864.2	3387.8	3711.6	2976.4	2708.7	2949.8
J048	chr17	41868785	41869042	TRUE	OK	2440.7	0.00288	0.7867	0.9461	-0.017	-0.009	2904.8	2541.1	2744.7	2122.6	2109.4	2221.8
J049	chr17	41869125	41869473	TRUE	OK	2310.9	0.00337	0.4615	0.8433	-0.065	-0.033	2796.3	2478.5	2587.6	2014.4	1940.0	2048.7
J050	chr17	41869587	41870354	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J051	chr17	41869587	41871688	TRUE	OK	2448.7	0.000785	0.84	0.9608	0.011	0.006	3062.5	2358.6	2726.6	2238.7	2159.3	2146.4
J052	chr17	41871832	41872031	TRUE	OK	1912.4	0.000838	0.9067	0.9778	0.009	0.004	2325.0	1864.4	2178.6	1727.5	1642.3	1736.4
J053	chr17	41872182	41873810	TRUE	OK	2037.1	0.00171	0.4635	0.8439	0.054	0.027	2570.5	1922.8	2200.8	1831.7	1796.0	1900.8
J054	chr17	41873965	41878102	TRUE	OK	1866.7	0.00217	0.02749	0.5401	-0.179	-0.089	2470.0	1883.2	2204.8	1643.1	1397.4	1602.0
J055	chr17	41878196	41878796	TRUE	OK	2422.5	0.00184	0.3712	0.8139	-0.072	-0.036	3162.1	2210.6	2882.7	2255.6	1918.4	2105.8
J056	chr17	41878924	41883121	TRUE	OK	2863.4	0.00138	0.05706	0.6418	-0.126	-0.063	3764.6	2753.8	3386.3	2575.3	2241.6	2458.7
J057	chr17	41883232	41884192	TRUE	OK	2328.2	0.000763	0.002703	0.2226	-0.157	-0.078	2984.6	2301.3	2837.3	2108.7	1850.8	1886.3
J058	chr17	41884274	41886111	TRUE	OK	2162.3	0.000681	0.2668	0.7812	-0.060	-0.030	2739.1	1982.2	2622.8	1981.6	1782.3	1866.0
J059	chr17	41886308	41887598	TRUE	OK	1645.4	0.0022	0.7643	0.9396	0.015	0.008	2122.9	1400.4	1944.9	1565.6	1371.0	1467.7
J060	chr17	41887703	41892278	TRUE	OK	2059.5	0.00394	0.4706	0.8464	0.060	0.030	2704.6	1662.1	2388.1	1926.0	1751.9	1924.0
J061	chr17	41892447	41893032	TRUE	OK	1623.0	0.00193	0.7181	0.9255	0.021	0.011	2034.1	1407.7	1941.9	1482.2	1351.4	1520.8
J062	chr17	41893174	41896619	TRUE	OK	1473.4	0.00397	0.5872	0.8838	0.040	0.020	1909.9	1173.1	1777.7	1365.1	1261.3	1353.6
J063	chr17	41893174	41897748	TRUE	OK	508.7	0.000937	0.59	0.8847	0.035	0.018	615.3	453.6	610.4	464.6	433.8	474.7
J064	chr17	41896649	41897748	TRUE	OK	1598.3	0.0066	0.3965	0.8226	0.090	0.045	2097.2	1199.1	1897.6	1512.0	1367.1	1517.0
J065	chr17	41897839	41898630	TRUE	OK	2552.2	0.012	0.1442	0.7323	0.221	0.111	3360.3	1693.4	2919.9	2487.9	2345.4	2506.0
J066	chr17	41898785	41901695	TRUE	OK	2968.9	0.0101	0.1318	0.7243	0.213	0.106	3836.6	2036.4	3432.6	2780.8	2869.3	2858.0
J067	chr17	41901813	41904728	TRUE	OK	2388.2	0.0092	0.1745	0.7461	0.181	0.090	3191.7	1681.9	2680.2	2306.2	2171.1	2298.2
J068	chr17	41901813	41912419	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.173	0.4877	NA	NA	NA	0.0	0.0	1.0	0.0	1.0	1.0
J069	chr17	41904790	41905521	TRUE	OK	2402.9	0.00645	0.181	0.7494	0.154	0.077	3117.8	1782.0	2762.8	2318.2	2123.1	2313.6
J070	chr17	41905658	41906527	TRUE	OK	2049.0	0.0068	0.3646	0.8119	0.100	0.050	2601.1	1530.7	2509.0	1958.8	1748.0	1946.2
J071	chr17	41905658	41918879	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J072	chr17	41906646	41907441	TRUE	OK	1525.4	0.0152	0.1109	0.7089	0.273	0.136	2030.2	943.7	1704.2	1582.5	1440.5	1451.2
J073	chr17	41907572	41908988	TRUE	OK	1814.1	0.00852	0.5514	0.8722	0.060	0.030	2434.5	1330.5	2184.7	1794.0	1601.1	1540.2
J074	chr17	41909068	41909509	TRUE	OK	2162.0	0.00847	0.8076	0.952	0.006	0.003	2922.5	1619.3	2664.1	2105.7	1796.0	1864.1
J075	chr17	41909700	41910221	TRUE	OK	1917.9	0.0126	0.4858	0.8515	0.088	0.044	2579.4	1317.0	2341.8	1941.9	1623.6	1703.6
J076	chr17	41910284	41912419	TRUE	OK	2015.6	0.0161	0.2747	0.7831	0.171	0.086	2729.3	1271.1	2390.1	1981.6	1854.8	1867.0
J077	chr17	41910284	41918879	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.372	0.7294	NA	NA	NA	1.0	1.0	0.0	0.0	0.0	2.9
J078	chr17	41912542	41913714	TRUE	OK	2479.8	0.0145	0.1588	0.7384	0.228	0.114	3270.6	1576.6	2881.7	2440.3	2317.0	2392.9
J079	chr17	41913896	41918879	TRUE	OK	1484.7	0.0155	0.2144	0.7631	0.205	0.103	1899.1	931.1	1823.1	1535.8	1324.0	1395.1
J080	chr17	41913900	41918879	TRUE	OK	947.9	0.0118	0.4852	0.8513	0.082	0.041	1286.7	646.5	1153.3	858.8	843.2	899.2
J081	chr17	41913900	41930357	TRUE	OK	10.7	0.0121	0.05125	0.6282	0.776	0.388	13.8	5.2	8.1	9.9	14.7	12.6
N082	chr17	41907569	41908988	TRUE	OK	26.6	0.0101	0.1485	0.7342	-0.417	-0.208	33.5	26.1	40.3	20.8	12.7	26.1

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000131473.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE