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Normalized Counts Table (ENSG00000166833.21)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr11	19350723	19351027	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.85	1	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
E002	chr11	19712836	19713334	TRUE	OK	137.9	0.0315	0.0008955	0.1241	-1.064	-0.532	148.9	66.7	159.1	205.5	144.9	102.5
E003	chr11	19713334	19713365	TRUE	OK	79.0	0.0144	0.003069	0.2366	-0.728	-0.364	68.0	39.6	80.6	121.1	86.2	78.3
E004	chr11	19713365	19713596	TRUE	OK	119.9	0.0157	0.0002461	0.05715	-0.896	-0.448	122.3	57.3	125.9	173.7	123.4	117.0
E005	chr11	19713596	19713962	TRUE	OK	155.8	0.0208	0.003746	0.2584	-0.818	-0.409	163.7	62.6	158.1	220.4	156.7	173.1
E006	chr11	19777801	19777982	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.398	0.55	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	1.0
E007	chr11	19813717	19813855	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E008	chr11	19832483	19832601	TRUE	OK	89.7	0.0256	0.06005	0.6484	-0.647	-0.324	88.7	28.2	89.6	126.1	111.6	93.8
E009	chr11	19842870	19842923	TRUE	OK	71.3	0.017	0.1614	0.7398	-0.431	-0.216	66.1	20.9	62.4	104.2	88.1	86.0
E010	chr11	19868924	19868997	TRUE	OK	71.5	0.0116	0.9315	0.9838	-0.066	-0.033	62.1	18.8	45.3	104.2	107.7	90.9
E011	chr11	19879868	19880127	TRUE	OK	115.3	0.00701	0.07942	0.6761	-0.343	-0.172	95.6	43.8	92.7	170.8	157.7	131.5
E012	chr11	19884293	19884362	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.259	0.3557	NA	NA	NA	1.0	0.0	0.0	0.0	2.9	4.8
E013	chr11	19892433	19892594	TRUE	OK	102.8	0.0272	0.06865	0.6607	-0.645	-0.322	108.5	32.3	95.7	145.9	109.7	124.7
E014	chr11	19931764	19931790	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.825	0.281	NA	NA	NA	0.0	1.0	0.0	0.0	0.0	0.0
E015	chr11	19933175	19933719	TRUE	OK	234.8	0.0264	0.07957	0.6763	-0.598	-0.299	245.5	78.2	204.5	340.5	281.1	259.1
E016	chr11	19933719	19934277	TRUE	OK	271.4	0.0224	0.01485	0.4467	-0.680	-0.340	289.9	113.7	227.6	427.9	286.9	282.3
E017	chr11	19939660	19939773	TRUE	OK	95.0	0.0237	0.01291	0.425	-0.763	-0.382	111.4	39.6	78.6	145.9	92.1	102.5
E018	chr11	19946400	19946509	TRUE	OK	115.6	0.0335	0.04383	0.6068	-0.756	-0.378	141.0	40.7	96.7	175.7	114.6	124.7
E019	chr11	19948690	19949080	TRUE	OK	189.5	0.0276	0.0682	0.6599	-0.621	-0.310	206.1	65.7	159.1	289.9	211.5	205.0
E020	chr11	19984124	19984247	TRUE	OK	92.8	0.028	0.08119	0.6784	-0.634	-0.317	92.7	28.2	91.7	133.0	102.8	108.3
E021	chr11	20022555	20022795	TRUE	OK	27.6	0.0306	0.006999	0.3396	1.091	0.545	8.9	2.1	15.1	55.6	49.0	34.8
E022	chr11	20022837	20022844	TRUE	OK	17.4	0.0104	0.009346	0.3834	1.025	0.513	6.9	3.1	7.1	33.8	27.4	26.1
E023	chr11	20022844	20022902	TRUE	OK	50.9	0.0168	0.01921	0.4853	0.670	0.335	20.7	9.4	31.2	96.3	71.5	76.4
E024	chr11	20022902	20023089	TRUE	OK	173.8	0.0115	1.408e-05	0.00725	0.876	0.438	84.8	27.1	75.5	288.9	283.0	283.3
E025	chr11	20023089	20023132	TRUE	OK	168.1	0.0257	0.0004737	0.08579	0.928	0.464	88.7	21.9	65.5	268.1	279.1	285.2
E026	chr11	20027254	20027467	TRUE	OK	20.2	0.0111	0.3764	0.8155	-0.311	-0.156	20.7	7.3	12.1	21.8	30.4	29.0
E027	chr11	20027553	20027701	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.173	0.65	NA	NA	NA	2.0	2.1	9.1	5.0	3.9	16.4
E028	chr11	20035958	20036097	TRUE	OK	372.6	0.0138	0.1795	0.7486	0.215	0.108	252.4	97.0	225.6	535.1	539.6	585.9
E029	chr11	20043980	20044272	TRUE	OK	521.9	0.00816	0.1041	0.7016	0.223	0.111	336.2	152.2	315.3	754.5	755.0	817.9
E030	chr11	20044967	20044991	TRUE	OK	234.6	0.00194	0.007308	0.3465	0.299	0.150	140.0	71.9	134.0	355.4	357.4	349.0
E031	chr11	20044991	20044995	TRUE	OK	173.8	0.003	0.1014	0.6993	0.214	0.107	103.5	56.3	107.8	246.2	257.6	271.7
E032	chr11	20044995	20045670	TRUE	OK	825.1	0.0135	0.03199	0.561	0.362	0.181	519.6	208.5	464.3	1275.7	1235.9	1246.3
E033	chr11	20048727	20049195	TRUE	OK	654.9	0.00829	0.04305	0.6038	0.284	0.142	413.1	185.6	381.7	1032.5	998.9	917.5
E034	chr11	20049835	20049901	TRUE	OK	77.8	0.00803	0.0383	0.5876	0.450	0.225	43.4	24.0	38.3	131.0	135.1	94.7
E035	chr11	20051288	20051333	TRUE	OK	161.5	0.0129	0.0112	0.4079	0.520	0.260	97.6	35.5	78.6	278.0	268.3	210.8
E036	chr11	20054079	20054240	TRUE	OK	415.2	0.0154	0.03757	0.585	0.378	0.189	282.0	99.1	209.5	643.3	650.2	607.2
E037	chr11	20055768	20055957	TRUE	OK	548.7	0.00874	0.09244	0.691	0.235	0.117	383.6	162.7	294.1	793.2	805.0	853.7
E038	chr11	20056529	20056628	TRUE	OK	63.9	0.0133	0.0291	0.5481	0.549	0.275	41.4	15.6	25.2	90.3	92.1	118.9
E039	chr11	20062306	20062359	TRUE	OK	412.6	0.0113	0.1931	0.7551	0.195	0.098	287.9	116.8	238.7	571.8	599.3	661.3
E040	chr11	20068185	20068209	TRUE	OK	344.5	0.0129	0.2262	0.7675	0.191	0.096	242.6	94.9	200.4	493.4	475.9	559.8
E041	chr11	20068323	20068398	TRUE	OK	395.1	0.0142	0.1507	0.735	0.241	0.121	264.3	103.2	234.7	595.7	541.5	631.3
E042	chr11	20077551	20077635	TRUE	OK	296.3	0.0163	0.1271	0.7216	0.291	0.146	188.3	74.0	177.3	473.6	384.9	479.6
E043	chr11	20077992	20078104	TRUE	OK	358.2	0.0115	0.06866	0.6607	0.309	0.154	223.8	95.9	207.5	561.9	479.8	580.1
E044	chr11	20080063	20080184	TRUE	OK	348.2	0.00943	0.1545	0.7364	0.208	0.104	236.6	98.0	204.5	513.3	489.6	547.2
E045	chr11	20080184	20080209	TRUE	OK	250.0	0.00508	0.3616	0.8112	0.104	0.052	177.5	77.2	152.1	376.3	349.6	367.4
E046	chr11	20080209	20080213	FALSE	LOW_COUNTS_INDEP_FILTER	7.3	0.0227	0.0009003	NA	NA	NA	1.0	0.0	2.0	12.9	11.8	16.4
E047	chr11	20082591	20082600	TRUE	OK	33.0	0.00684	0.02925	0.5489	0.602	0.301	14.8	6.3	20.1	48.6	52.9	55.1
E048	chr11	20082998	20083006	FALSE	LOW_COUNTS_INDEP_FILTER	9.5	0.0159	0.04144	NA	NA	NA	3.0	2.1	4.0	13.9	17.6	16.4
E049	chr11	20083006	20083179	TRUE	OK	448.6	0.00224	0.05896	0.6459	0.183	0.092	283.0	159.5	260.9	703.9	631.6	652.6
E050	chr11	20090864	20091018	TRUE	OK	422.4	0.0016	0.09344	0.6921	0.152	0.076	273.1	161.6	237.7	652.3	616.9	592.7
E051	chr11	20092205	20092368	TRUE	OK	426.8	0.00282	0.6724	0.9111	0.034	0.017	293.8	159.5	265.9	665.2	601.3	575.3
E052	chr11	20093098	20093199	TRUE	OK	495.7	0.00605	0.3987	0.8236	0.083	0.042	361.9	160.6	294.1	719.8	719.8	718.4
E053	chr11	20095671	20095767	TRUE	OK	601.1	0.00297	0.2728	0.783	0.094	0.047	419.1	206.5	359.6	873.7	878.4	869.2
E054	chr11	20097576	20097745	TRUE	OK	679.6	0.0033	0.5479	0.8713	0.044	0.022	486.1	246.1	408.9	939.2	995.9	1001.6
E055	chr11	20100936	20101172	TRUE	OK	613.4	0.00142	0.07725	0.6741	0.137	0.068	413.1	224.2	347.5	901.5	911.7	882.7
E056	chr11	20103254	20103409	TRUE	OK	485.7	0.00483	0.01646	0.4632	0.290	0.145	301.7	143.9	277.0	760.5	754.0	676.8
E057	chr11	20103652	20103724	TRUE	OK	389.3	0.00263	0.01431	0.4415	0.253	0.126	247.5	121.0	220.6	589.7	608.1	549.2
E058	chr11	20104210	20105530	TRUE	OK	12.8	0.0498	0.4747	0.8478	0.377	0.188	5.9	2.1	10.1	24.8	23.5	10.6
E059	chr11	20105530	20105727	TRUE	OK	563.8	0.00249	0.01384	0.4366	0.247	0.124	340.2	206.5	311.2	881.6	889.2	754.1
E060	chr11	20107244	20107663	FALSE	LOW_COUNTS_INDEP_FILTER	9.0	0.0291	0.3826	NA	NA	NA	2.0	3.1	7.1	10.9	12.7	18.4
E061	chr11	20107663	20107782	TRUE	OK	547.4	0.00133	0.02726	0.5388	0.183	0.092	341.2	212.7	305.2	817.1	847.1	760.9
E062	chr11	20114382	20114591	TRUE	OK	17.8	0.047	0.8238	0.9562	-0.115	-0.057	6.9	7.3	18.1	30.8	28.4	15.5
E063	chr11	20114591	20114680	TRUE	OK	457.9	0.00226	0.06665	0.6571	0.182	0.091	286.9	170.0	261.9	645.3	741.3	642.0
E064	chr11	20114680	20114795	TRUE	OK	505.1	0.00216	0.376	0.8154	0.084	0.042	326.4	202.3	303.2	683.0	795.2	720.3
E065	chr11	20118132	20118282	TRUE	OK	458.0	0.00172	0.7838	0.9454	0.023	0.011	308.6	192.9	275.0	623.5	705.1	642.9
E066	chr11	20118282	20118574	TRUE	OK	619.2	0.0022	0.8541	0.9642	-0.012	-0.006	410.2	287.8	369.7	837.9	948.9	860.5
E067	chr11	20118574	20118581	TRUE	OK	254.5	0.00236	0.9169	0.9805	-0.007	-0.003	164.7	127.2	146.0	351.4	377.0	360.6
E068	chr11	20118581	20118603	TRUE	OK	321.5	0.00206	0.7946	0.9484	0.026	0.013	221.9	143.9	178.3	441.8	476.9	466.0
E069	chr11	20118603	20121598	TRUE	OK	3762.0	0.0292	0.4196	0.8301	-0.165	-0.083	2366.4	2233.5	2202.8	5052.3	5358.6	5358.2
E070	chr11	20121598	20121601	FALSE	LOW_COUNTS_INDEP_FILTER	8.1	0.0752	0.2318	NA	NA	NA	12.8	5.2	2.0	6.0	10.8	11.6
J071	chr11	19351027	19832483	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	1	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J072	chr11	19713962	19832483	TRUE	OK	53.4	0.0075	0.003267	0.2439	-0.676	-0.338	51.3	20.9	52.4	75.5	62.7	58.0
J073	chr11	19777982	19832483	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.2594	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J074	chr11	19813855	19832483	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J075	chr11	19832601	19842870	TRUE	OK	56.8	0.0381	0.2128	0.7625	-0.579	-0.289	58.2	13.6	55.4	81.4	65.6	66.7
J076	chr11	19842923	19868924	TRUE	OK	49.8	0.0109	0.982	0.9957	-0.050	-0.025	42.4	10.4	34.2	74.5	69.5	67.7
J077	chr11	19868997	19879868	TRUE	OK	49.8	0.00733	0.8069	0.9517	0.044	0.022	38.5	15.6	29.2	74.5	83.2	58.0
J078	chr11	19880127	19884293	FALSE	LOW_COUNTS_INDEP_FILTER	0.6	0.17	0.2675	NA	NA	NA	0.0	0.0	0.0	0.0	2.0	1.9
J079	chr11	19880127	19892433	TRUE	OK	53.1	0.0219	0.1236	0.719	-0.495	-0.247	45.4	18.8	50.4	85.4	51.9	66.7
J080	chr11	19884362	19892433	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.197	0.7447	NA	NA	NA	1.0	0.0	0.0	0.0	2.9	1.0
J081	chr11	19892594	19933175	TRUE	OK	57.5	0.0265	0.03529	0.5756	-0.766	-0.383	70.0	17.7	51.4	73.5	61.7	70.6
J082	chr11	19931790	19933175	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J083	chr11	19934277	19939660	TRUE	OK	60.1	0.0215	0.01926	0.4855	-0.701	-0.350	67.0	28.2	46.3	98.3	59.7	60.9
J084	chr11	19939773	19946400	TRUE	OK	60.2	0.0113	0.0001895	0.04815	-0.912	-0.456	72.0	29.2	53.4	83.4	58.8	64.8
J085	chr11	19946509	19948690	TRUE	OK	76.5	0.0891	0.4254	0.8315	-0.663	-0.331	104.5	15.6	57.4	122.1	70.5	88.9
J086	chr11	19949080	19984124	TRUE	OK	56.7	0.0268	0.07942	0.6761	-0.642	-0.321	53.2	16.7	60.4	81.4	65.6	62.8
J087	chr11	19984247	20035958	TRUE	OK	54.7	0.017	0.04077	0.5965	-0.598	-0.299	52.3	19.8	51.4	81.4	53.9	69.6
J088	chr11	20022795	20023089	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.194	0.9357	NA	NA	NA	1.0	0.0	4.0	2.0	7.8	1.9
J089	chr11	20022902	20023089	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.214	0.7521	NA	NA	NA	0.0	0.0	1.0	1.0	0.0	2.9
J090	chr11	20023132	20035958	TRUE	OK	149.8	0.0363	0.001426	0.1605	0.973	0.486	77.9	16.7	58.4	234.3	251.7	260.1
J091	chr11	20027467	20035958	TRUE	OK	16.4	0.00772	0.8495	0.9631	-0.073	-0.037	13.8	7.3	8.1	19.9	27.4	22.2
J092	chr11	20027701	20035958	FALSE	LOW_COUNTS_INDEP_FILTER	5.6	0.232	0.4386	NA	NA	NA	2.0	2.1	9.1	2.0	3.9	14.5
J093	chr11	20036097	20043980	TRUE	OK	201.1	0.00578	0.5187	0.8619	0.077	0.039	140.0	63.6	127.9	274.0	282.0	319.1
J094	chr11	20044272	20044967	TRUE	OK	208.6	0.00135	0.002778	0.2255	0.329	0.165	122.3	64.6	115.8	312.7	316.3	320.0
J095	chr11	20045670	20048727	TRUE	OK	164.5	0.00443	0.1685	0.7435	0.190	0.095	110.4	48.0	97.7	265.1	228.2	237.8
J096	chr11	20049195	20049835	TRUE	OK	59.7	0.00482	0.03674	0.5818	0.438	0.219	36.5	17.7	27.2	98.3	101.8	76.4
J097	chr11	20049195	20051288	TRUE	OK	71.6	0.00939	0.01515	0.4496	0.545	0.272	41.4	14.6	36.3	128.1	116.5	92.8
J098	chr11	20049195	20054079	TRUE	OK	75.0	0.0224	0.2379	0.7715	0.267	0.133	63.1	17.7	31.2	112.2	112.6	113.1
J099	chr11	20049901	20051288	TRUE	OK	52.9	0.00689	0.01167	0.4123	0.595	0.298	27.6	12.5	26.2	91.3	93.0	66.7
J100	chr11	20051333	20054079	TRUE	OK	126.5	0.00852	0.01217	0.4165	0.475	0.238	75.9	30.2	63.5	221.4	201.7	166.3
J101	chr11	20054240	20055768	TRUE	OK	254.8	0.00856	0.02967	0.5509	0.340	0.170	172.6	65.7	129.9	379.2	393.7	387.7
J102	chr11	20055957	20056529	TRUE	OK	41.9	0.0101	0.2733	0.783	0.276	0.138	32.5	13.6	16.1	62.5	55.8	70.6
J103	chr11	20055957	20062306	TRUE	OK	302.7	0.00767	0.2619	0.7795	0.154	0.077	219.9	97.0	164.2	417.0	431.9	486.3
J104	chr11	20056628	20062306	TRUE	OK	36.9	0.00418	0.01727	0.4702	0.598	0.299	23.7	9.4	13.1	55.6	59.7	59.9
J105	chr11	20062359	20068185	TRUE	OK	313.6	0.0134	0.1894	0.7535	0.215	0.107	213.0	82.4	188.4	449.7	442.6	505.7
J106	chr11	20068209	20068323	TRUE	OK	288.5	0.0152	0.253	0.7764	0.190	0.095	206.1	76.1	168.2	416.0	394.6	469.9
J107	chr11	20068398	20077551	TRUE	OK	223.7	0.0194	0.2307	0.7694	0.246	0.123	139.0	56.3	144.0	349.5	279.1	374.2
J108	chr11	20077635	20077992	TRUE	OK	215.8	0.00843	0.01136	0.4091	0.430	0.215	126.2	55.3	115.8	355.4	291.8	350.0
J109	chr11	20078104	20080063	TRUE	OK	224.6	0.00926	0.0599	0.6479	0.311	0.155	140.0	58.4	130.9	344.5	309.5	364.5
J110	chr11	20080209	20082591	TRUE	OK	21.0	0.0101	0.07647	0.673	0.608	0.304	10.8	3.1	12.1	25.8	39.2	34.8
J111	chr11	20080209	20083006	TRUE	OK	194.7	0.00384	0.849	0.963	0.010	0.005	143.0	68.8	119.9	301.8	255.6	279.4
J112	chr11	20080213	20082998	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J113	chr11	20082600	20083006	TRUE	OK	27.4	0.0055	0.05591	0.6399	0.552	0.276	11.8	5.2	18.1	39.7	45.0	44.5
J114	chr11	20083179	20090864	TRUE	OK	247.9	0.00157	0.008044	0.3613	0.285	0.142	145.9	89.7	133.0	396.1	354.5	368.4
J115	chr11	20091018	20092205	TRUE	OK	210.2	0.00156	0.6551	0.9061	-0.054	-0.027	145.9	91.8	131.9	316.7	283.0	292.0
J116	chr11	20092368	20093098	TRUE	OK	232.6	0.00447	0.5685	0.8776	0.059	0.029	169.6	77.2	140.0	366.3	333.9	308.4
J117	chr11	20093199	20095671	TRUE	OK	390.0	0.0067	0.2632	0.7801	0.133	0.067	280.0	121.0	225.6	547.0	572.9	593.6
J118	chr11	20095767	20097576	TRUE	OK	452.4	0.00184	0.295	0.7901	0.085	0.042	310.6	157.5	276.0	649.3	649.3	672.0
J119	chr11	20097745	20100936	TRUE	OK	272.0	0.00318	0.8577	0.9652	-0.031	-0.015	206.1	116.8	150.1	368.3	382.9	408.0
J120	chr11	20101172	20103254	TRUE	OK	287.1	0.00173	0.006686	0.3329	0.277	0.139	173.5	88.6	166.2	454.7	427.9	411.9
J121	chr11	20103409	20103652	TRUE	OK	285.9	0.00474	0.006252	0.3248	0.356	0.178	181.4	76.1	152.1	448.7	428.9	428.3
J122	chr11	20103724	20105530	TRUE	OK	266.4	0.00256	0.1199	0.7159	0.175	0.088	172.6	92.8	153.1	403.1	426.0	351.0
J123	chr11	20105727	20107663	TRUE	OK	316.3	0.00153	0.02643	0.5335	0.219	0.110	201.1	122.0	163.2	486.5	491.6	433.1
J124	chr11	20107782	20114591	TRUE	OK	321.2	0.0015	0.0148	0.4463	0.238	0.119	186.4	114.7	188.4	456.7	515.1	466.0
J125	chr11	20114795	20118132	TRUE	OK	244.4	0.00219	0.5305	0.8655	0.069	0.035	160.7	99.1	145.0	326.6	391.7	343.2
N126	chr11	20120284	20120573	TRUE	OK	10.1	0.0519	0.07172	0.6656	-0.941	-0.471	4.9	12.5	9.1	11.9	8.8	13.5

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000166833.21
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE