<<

< Prev Gene

TOP

Next Gene >

>>

Raw Counts Table (ENSG00000166484.20)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	19377720	19377752	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0378	0.8552	NA	NA	NA	12.0	5.0	3.0	7.0	10.0	8.0
E002	chr17	19377752	19377798	TRUE	OK	16.5	0.0265	0.4399	0.8362	0.277	0.138	23.0	8.0	10.0	17.0	22.0	20.0
E003	chr17	19377798	19377991	TRUE	OK	77.4	0.0243	0.1284	0.7223	0.394	0.197	94.0	38.0	53.0	87.0	96.0	102.0
E004	chr17	19377991	19378101	TRUE	OK	109.0	0.0135	0.2312	0.7696	0.255	0.128	118.0	60.0	97.0	107.0	126.0	153.0
E005	chr17	19378252	19378259	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.0237	0.8672	NA	NA	NA	7.0	6.0	5.0	4.0	8.0	11.0
E006	chr17	19378259	19378281	FALSE	LOW_COUNTS_INDEP_FILTER	7.4	0.0283	0.921	NA	NA	NA	9.0	6.0	5.0	4.0	8.0	13.0
E007	chr17	19378281	19378398	TRUE	OK	13.5	0.0649	0.9134	0.9796	0.169	0.085	12.0	9.0	14.0	6.0	13.0	28.0
E008	chr17	19378398	19378402	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.121	0.8128	NA	NA	NA	7.0	7.0	9.0	4.0	4.0	21.0
E009	chr17	19378402	19378467	FALSE	LOW_COUNTS_INDEP_FILTER	9.2	0.0988	0.7726	NA	NA	NA	7.0	6.0	9.0	6.0	5.0	23.0
E010	chr17	19378467	19378497	TRUE	OK	17.7	0.0323	0.8413	0.961	-0.117	-0.058	27.0	10.0	14.0	19.0	14.0	23.0
E011	chr17	19378497	19378503	TRUE	OK	24.9	0.0293	0.5745	0.8796	0.157	0.079	35.0	11.0	19.0	27.0	29.0	30.0
E012	chr17	19378503	19378508	TRUE	OK	33.4	0.0561	0.545	0.8702	0.145	0.072	52.0	13.0	23.0	34.0	44.0	37.0
E013	chr17	19378508	19378526	TRUE	OK	44.4	0.0494	0.7871	0.9462	0.004	0.002	66.0	18.0	39.0	50.0	52.0	44.0
E014	chr17	19378526	19378528	TRUE	OK	45.8	0.0446	0.5917	0.8852	0.113	0.057	66.0	19.0	37.0	51.0	57.0	48.0
E015	chr17	19378528	19378542	TRUE	OK	65.1	0.0208	0.9689	0.9926	-0.045	-0.022	84.0	37.0	62.0	66.0	82.0	63.0
E016	chr17	19378542	19378554	TRUE	OK	33.8	0.0219	0.4812	0.8498	0.193	0.097	45.0	19.0	23.0	34.0	45.0	39.0
E017	chr17	19378554	19378630	TRUE	OK	58.4	0.0196	0.1419	0.731	0.376	0.188	70.0	32.0	38.0	70.0	73.0	71.0
E018	chr17	19378630	19378748	TRUE	OK	16.3	0.0165	0.7355	0.9313	0.128	0.064	20.0	11.0	12.0	11.0	21.0	24.0
E019	chr17	19378748	19378750	TRUE	OK	10.3	0.0588	0.2352	0.7708	0.651	0.325	13.0	3.0	6.0	7.0	15.0	19.0
E020	chr17	19378750	19378891	TRUE	OK	20.9	0.0749	0.4214	0.8304	0.520	0.260	24.0	11.0	12.0	11.0	24.0	45.0
E021	chr17	19378891	19378895	TRUE	OK	15.9	0.0608	0.4209	0.8302	0.510	0.255	16.0	9.0	11.0	8.0	19.0	34.0
E022	chr17	19378895	19379132	TRUE	OK	262.3	0.0159	0.2563	0.7777	0.225	0.112	283.0	148.0	244.0	267.0	329.0	318.0
E023	chr17	19379132	19379592	TRUE	OK	19.1	0.00986	0.4547	0.8409	-0.232	-0.116	18.0	17.0	22.0	13.0	24.0	21.0
E024	chr17	19379592	19379605	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0675	0.9124	NA	NA	NA	3.0	11.0	7.0	5.0	12.0	7.0
E025	chr17	19379605	19379781	TRUE	OK	14.5	0.0406	0.7374	0.9319	-0.160	-0.080	7.0	17.0	18.0	11.0	20.0	14.0
E026	chr17	19379781	19379947	TRUE	OK	190.5	0.00829	0.2554	0.7776	0.186	0.093	186.0	117.0	191.0	200.0	219.0	240.0
E027	chr17	19379947	19379961	TRUE	OK	36.2	0.00693	0.7287	0.9291	0.079	0.040	34.0	22.0	41.0	35.0	43.0	44.0
E028	chr17	19379961	19380083	TRUE	OK	52.1	0.0222	0.3688	0.8131	0.235	0.118	48.0	24.0	60.0	53.0	60.0	71.0
E029	chr17	19380083	19380166	TRUE	OK	46.0	0.0175	0.5261	0.8643	0.159	0.079	48.0	22.0	50.0	42.0	57.0	60.0
E030	chr17	19380166	19380231	TRUE	OK	38.9	0.008	0.1161	0.7131	0.376	0.188	32.0	20.0	41.0	43.0	47.0	53.0
E031	chr17	19380231	19380394	TRUE	OK	53.8	0.00808	0.01643	0.463	0.525	0.263	47.0	25.0	49.0	67.0	68.0	70.0
E032	chr17	19380394	19380472	TRUE	OK	53.4	0.0128	0.003115	0.2381	0.733	0.366	49.0	23.0	38.0	75.0	72.0	67.0
E033	chr17	19380472	19380483	TRUE	OK	46.9	0.00595	1.588e-05	0.007963	0.960	0.480	35.0	20.0	32.0	67.0	67.0	64.0
E034	chr17	19380483	19380501	TRUE	OK	53.8	0.00468	4.494e-06	0.002915	0.938	0.469	41.0	24.0	36.0	72.0	74.0	80.0
E035	chr17	19380501	19380607	FALSE	LOW_COUNTS_INDEP_FILTER	9.6	0.0919	0.8286	NA	NA	NA	4.0	5.0	17.0	7.0	15.0	10.0
E036	chr17	19380607	19380623	TRUE	OK	120.9	0.0108	0.005303	0.3033	0.559	0.280	101.0	61.0	109.0	152.0	146.0	164.0
E037	chr17	19380623	19380680	TRUE	OK	141.0	0.0124	0.04101	0.5972	0.416	0.208	115.0	80.0	140.0	175.0	162.0	182.0
E038	chr17	19380680	19380860	TRUE	OK	185.6	0.00832	0.5233	0.8632	0.101	0.050	170.0	129.0	196.0	209.0	217.0	201.0
E039	chr17	19380860	19380933	TRUE	OK	119.3	0.00458	0.728	0.9288	-0.061	-0.031	121.0	86.0	129.0	116.0	141.0	128.0
E040	chr17	19380933	19381113	TRUE	OK	161.1	0.00427	0.9422	0.9864	-0.017	-0.008	176.0	114.0	157.0	153.0	191.0	183.0
E041	chr17	19381113	19381213	TRUE	OK	127.9	0.00282	0.8571	0.9651	0.022	0.011	130.0	93.0	127.0	128.0	147.0	148.0
E042	chr17	19381213	19381686	TRUE	OK	352.8	0.00201	0.07205	0.666	0.184	0.092	336.0	257.0	328.0	355.0	422.0	436.0
E043	chr17	19381686	19381780	TRUE	OK	57.5	0.00403	0.5336	0.8666	-0.117	-0.059	52.0	53.0	60.0	53.0	64.0	65.0
E044	chr17	19381780	19382088	TRUE	OK	285.2	0.00511	0.842	0.9612	-0.030	-0.015	272.0	270.0	250.0	304.0	306.0	319.0
E045	chr17	19382088	19382466	TRUE	OK	287.3	0.00574	0.2308	0.7695	-0.177	-0.089	275.0	290.0	268.0	287.0	294.0	318.0
E046	chr17	19382812	19382946	TRUE	OK	221.6	0.00713	0.09929	0.6973	-0.270	-0.135	214.0	234.0	214.0	212.0	210.0	251.0
E047	chr17	19383077	19383339	TRUE	OK	294.7	0.0161	0.08418	0.6823	-0.392	-0.196	300.0	350.0	256.0	252.0	295.0	321.0
E048	chr17	19383339	19383538	TRUE	OK	142.3	0.0183	0.1177	0.714	-0.402	-0.201	143.0	182.0	119.0	121.0	144.0	147.0
E049	chr17	19383538	19383543	FALSE	LOW_COUNTS_INDEP_FILTER	2.3	0.0645	0.2163	NA	NA	NA	3.0	2.0	4.0	2.0	0.0	3.0
E050	chr17	19383543	19383544	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.114	0.4087	NA	NA	NA	1.0	1.0	3.0	2.0	0.0	1.0
J051	chr17	19378101	19378895	TRUE	OK	54.6	0.00656	0.2566	0.7778	0.239	0.119	55.0	31.0	52.0	49.0	70.0	74.0
J052	chr17	19378101	19380607	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0556	0.3525	NA	NA	NA	1.0	1.0	1.0	3.0	1.0	3.0
J053	chr17	19378101	19381780	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.4942	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J054	chr17	19378101	19382812	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.565	0.6413	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
J055	chr17	19378398	19378895	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0908	0.3963	NA	NA	NA	2.0	0.0	3.0	0.0	2.0	1.0
J056	chr17	19378402	19378895	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.235	0.3978	NA	NA	NA	1.0	3.0	1.0	0.0	0.0	3.0
J057	chr17	19378542	19378895	TRUE	OK	33.0	0.0385	0.8706	0.9687	-0.105	-0.053	42.0	15.0	38.0	32.0	45.0	28.0
J058	chr17	19378542	19380607	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0812	0.8866	NA	NA	NA	0.0	1.0	2.0	2.0	1.0	1.0
J059	chr17	19378630	19378895	TRUE	OK	44.3	0.0334	0.07784	0.6748	0.572	0.286	52.0	19.0	27.0	60.0	61.0	50.0
J060	chr17	19379132	19379592	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J061	chr17	19379132	19379781	TRUE	OK	110.0	0.00697	0.2672	0.7813	0.189	0.094	116.0	65.0	103.0	116.0	126.0	140.0
J062	chr17	19379605	19379781	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.56	0.6396	NA	NA	NA	0.0	0.0	0.0	0.0	1.0	0.0
J063	chr17	19379947	19380394	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.24	0.3157	NA	NA	NA	2.0	1.0	0.0	5.0	4.0	0.0
J064	chr17	19379947	19380483	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.0806	0.03365	NA	NA	NA	6.0	0.0	3.0	9.0	6.0	15.0
J065	chr17	19379947	19380607	TRUE	OK	61.3	0.016	0.2346	0.7706	0.285	0.143	51.0	32.0	69.0	70.0	69.0	80.0
J066	chr17	19380501	19380607	TRUE	OK	45.7	0.00428	1.535e-07	0.0001765	1.135	0.568	34.0	18.0	26.0	67.0	65.0	68.0
J067	chr17	19381686	19381780	TRUE	OK	88.5	0.00209	0.03994	0.5934	0.308	0.154	84.0	60.0	74.0	95.0	112.0	111.0
J068	chr17	19382466	19382812	TRUE	OK	104.8	0.00391	0.2892	0.7882	-0.166	-0.083	92.0	106.0	107.0	98.0	108.0	121.0
J069	chr17	19382946	19383077	TRUE	OK	151.2	0.0117	0.1857	0.7511	-0.273	-0.136	152.0	169.0	133.0	146.0	135.0	176.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000166484.20
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE