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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 150442634 | 150444232 | TRUE | OK | 494.2 | 0.006 | 0.7848 | 0.9457 | -0.014 | -0.007 | 497.9 | 574.5 | 454.3 | 520.2 | 436.8 | 481.5 |
E002 | chr5 | 150444232 | 150444237 | TRUE | OK | 410.4 | 0.00387 | 0.8223 | 0.9558 | -0.016 | -0.008 | 395.4 | 529.7 | 344.5 | 420.9 | 347.6 | 424.4 |
E003 | chr5 | 150444237 | 150444291 | TRUE | OK | 9243.9 | 0.00619 | 0.004229 | 0.274 | -0.398 | -0.199 | 8782.4 | 14867.1 | 8185.7 | 8698.8 | 6903.9 | 8025.7 |
E004 | chr5 | 150444291 | 150444353 | TRUE | OK | 23926.5 | 0.00467 | 0.04707 | 0.6171 | -0.255 | -0.128 | 21294.8 | 36419.1 | 20538.3 | 23026.8 | 20488.5 | 21791.5 |
E005 | chr5 | 150444478 | 150444641 | TRUE | OK | 103.9 | 0.00824 | 0.0003296 | 0.06834 | -0.706 | -0.353 | 103.5 | 187.7 | 102.7 | 71.5 | 93.0 | 64.8 |
E006 | chr5 | 150445423 | 150445608 | TRUE | OK | 142.1 | 0.00828 | 0.03456 | 0.5723 | -0.358 | -0.179 | 156.8 | 181.4 | 151.1 | 102.3 | 129.3 | 131.5 |
E007 | chr5 | 150445608 | 150445685 | TRUE | OK | 37516.7 | 0.00445 | 0.09643 | 0.6953 | -0.212 | -0.106 | 33357.7 | 55027.4 | 31850.4 | 36272.6 | 33480.6 | 35111.6 |
E008 | chr5 | 150446801 | 150446937 | TRUE | OK | 70918.0 | 0.00569 | 0.5049 | 0.8573 | -0.105 | -0.052 | 62186.6 | 96792.5 | 60838.3 | 69906.3 | 65952.5 | 69831.7 |
E009 | chr5 | 150446937 | 150446963 | TRUE | OK | 63717.5 | 0.00265 | 0.004141 | 0.2718 | 0.259 | 0.129 | 55084.4 | 80767.0 | 54755.7 | 63680.5 | 62692.5 | 65325.3 |
E010 | chr5 | 150446963 | 150447584 | TRUE | OK | 2374.6 | 0.0204 | 0.2806 | 0.7852 | -0.212 | -0.106 | 2166.3 | 3219.9 | 2423.4 | 2283.4 | 2655.8 | 1498.6 |
E011 | chr5 | 150447584 | 150447735 | TRUE | OK | 67314.9 | 0.00533 | 0.04651 | 0.6153 | 0.273 | 0.136 | 59223.6 | 84174.6 | 58420.9 | 67980.3 | 65397.3 | 68692.8 |
E012 | chr5 | 150447735 | 150448832 | TRUE | OK | 767.8 | 0.0211 | 0.3436 | 0.805 | -0.177 | -0.088 | 805.6 | 896.7 | 797.7 | 785.3 | 817.7 | 503.7 |
E013 | chr5 | 150448832 | 150448913 | TRUE | OK | 19.4 | 0.0538 | 0.06352 | 0.6529 | -0.862 | -0.431 | 31.6 | 16.7 | 28.2 | 10.9 | 12.7 | 16.4 |
E014 | chr5 | 150448913 | 150449268 | TRUE | OK | 37.1 | 0.0658 | 0.2012 | 0.7585 | -0.573 | -0.286 | 50.3 | 29.2 | 56.4 | 24.8 | 22.5 | 39.6 |
E015 | chr5 | 150449268 | 150449436 | TRUE | OK | 46.2 | 0.0361 | 0.2739 | 0.783 | -0.370 | -0.185 | 51.3 | 41.7 | 66.5 | 40.7 | 32.3 | 44.5 |
E016 | chr5 | 150449436 | 150449485 | TRUE | OK | 24.4 | 0.0783 | 0.1349 | 0.7264 | -0.841 | -0.421 | 26.6 | 18.8 | 50.4 | 16.9 | 14.7 | 19.3 |
E017 | chr5 | 150449485 | 150449491 | TRUE | OK | 1694.2 | 0.00143 | 0.0009364 | 0.1272 | -0.219 | -0.109 | 1654.5 | 2303.4 | 1629.7 | 1524.9 | 1458.1 | 1594.3 |
E018 | chr5 | 150449491 | 150449691 | TRUE | OK | 2675.6 | 0.00169 | 2.32e-05 | 0.01065 | -0.298 | -0.149 | 2603.1 | 3791.3 | 2632.9 | 2435.3 | 2144.6 | 2446.1 |
E019 | chr5 | 150449691 | 150449696 | TRUE | OK | 121.8 | 0.0224 | 0.03734 | 0.5842 | -0.519 | -0.260 | 134.1 | 181.4 | 123.9 | 103.3 | 60.7 | 127.6 |
E020 | chr5 | 150449696 | 150449702 | TRUE | OK | 24.0 | 0.0619 | 0.1113 | 0.7091 | -0.667 | -0.333 | 33.5 | 31.3 | 25.2 | 28.8 | 6.9 | 18.4 |
E021 | chr5 | 150449702 | 150449727 | TRUE | OK | 28171.6 | 0.0121 | 0.07194 | 0.6658 | 0.373 | 0.186 | 25642.1 | 29348.4 | 24051.5 | 30309.9 | 27521.7 | 32156.0 |
E022 | chr5 | 150449727 | 150449739 | TRUE | OK | 614.9 | 0.0162 | 0.4855 | 0.8514 | 0.186 | 0.093 | 642.9 | 605.8 | 523.8 | 649.3 | 541.5 | 726.1 |
J023 | chr5 | 150444353 | 150444478 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0266 | 0.402 | NA | NA | NA | 3.0 | 4.2 | 5.0 | 8.9 | 3.9 | 3.9 |
J024 | chr5 | 150444353 | 150445608 | TRUE | OK | 23671.7 | 0.00446 | 0.04858 | 0.6218 | -0.249 | -0.125 | 20982.3 | 36030.1 | 20310.6 | 22759.7 | 20263.3 | 21684.2 |
J025 | chr5 | 150444641 | 150445608 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0178 | 0.7373 | NA | NA | NA | 6.9 | 8.3 | 3.0 | 5.0 | 8.8 | 5.8 |
J026 | chr5 | 150445685 | 150446801 | TRUE | OK | 34175.8 | 0.00395 | 0.1784 | 0.7483 | -0.167 | -0.083 | 30184.7 | 49843.0 | 28772.3 | 33168.1 | 30577.0 | 32509.9 |
J027 | chr5 | 150446963 | 150447584 | TRUE | OK | 56817.4 | 0.00132 | 0.003113 | 0.238 | 0.188 | 0.094 | 48848.8 | 72506.6 | 49066.9 | 56662.5 | 55743.5 | 58075.9 |
J028 | chr5 | 150447735 | 150448832 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.26 | 0.2393 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J029 | chr5 | 150447735 | 150449268 | TRUE | OK | 14.4 | 0.0487 | 0.571 | 0.8786 | -0.206 | -0.103 | 15.8 | 13.6 | 18.1 | 17.9 | 5.9 | 15.5 |
J030 | chr5 | 150447735 | 150449485 | TRUE | OK | 1575.1 | 0.00108 | 0.001479 | 0.1636 | -0.189 | -0.094 | 1527.3 | 2129.2 | 1491.7 | 1438.6 | 1366.1 | 1497.6 |
J031 | chr5 | 150447735 | 150449491 | TRUE | OK | 774.9 | 0.00169 | 0.0006512 | 0.1038 | -0.273 | -0.136 | 743.5 | 1132.4 | 725.2 | 730.7 | 609.1 | 708.7 |
J032 | chr5 | 150447735 | 150449702 | TRUE | OK | 28159.5 | 0.0123 | 0.07381 | 0.6686 | 0.372 | 0.186 | 25637.2 | 29336.9 | 24042.4 | 30286.0 | 27508.9 | 32145.4 |
N033 | chr5 | 150444351 | 150445608 | TRUE | OK | 23.3 | 0.00658 | 0.1973 | 0.7564 | -0.349 | -0.174 | 21.7 | 30.2 | 28.2 | 15.9 | 23.5 | 20.3 |
N034 | chr5 | 150446963 | 150447473 | TRUE | OK | 14.0 | 0.0462 | 0.5298 | 0.8653 | 0.224 | 0.112 | 8.9 | 25.0 | 6.0 | 9.9 | 19.6 | 14.5 |
N035 | chr5 | 150446963 | 150447673 | TRUE | OK | 15.6 | 0.0194 | 0.5107 | 0.8595 | -0.220 | -0.110 | 19.7 | 13.6 | 18.1 | 13.9 | 14.7 | 13.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000164587.13 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |