<<

< Prev Gene

TOP

Next Gene >

>>

Normalized Counts Table (ENSG00000164402.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr5	132750818	132751458	TRUE	OK	15.1	0.0405	0.9587	0.9904	0.057	0.028	14.8	17.7	14.1	20.8	16.6	6.8
E002	chr5	132751458	132752178	TRUE	OK	16.2	0.0232	0.7594	0.9383	0.115	0.057	9.9	21.9	17.1	15.9	18.6	13.5
E003	chr5	132752178	132752181	FALSE	LOW_COUNTS_INDEP_FILTER	5.3	0.0256	0.4334	NA	NA	NA	3.9	4.2	6.0	6.0	6.9	4.8
E004	chr5	132754178	132754520	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E005	chr5	132756000	132756004	TRUE	OK	29.3	0.0499	0.898	0.9756	0.013	0.006	20.7	48.0	23.2	26.8	22.5	34.8
E006	chr5	132756004	132756332	TRUE	OK	834.6	0.0258	0.1784	0.7483	-0.396	-0.198	778.0	1285.7	869.2	643.3	714.9	716.4
E007	chr5	132756332	132758142	TRUE	OK	4214.0	0.0043	0.1298	0.7231	-0.164	-0.082	4447.9	4585.9	4632.2	3767.6	3949.4	3901.2
E008	chr5	132758142	132758143	TRUE	OK	377.8	0.00195	0.5447	0.8701	-0.061	-0.030	424.0	350.4	434.1	355.4	331.0	372.2
E009	chr5	132758143	132758199	TRUE	OK	526.1	0.00305	0.07159	0.6653	-0.193	-0.096	632.0	513.0	605.3	472.6	426.0	507.6
E010	chr5	132758199	132758556	TRUE	OK	1590.8	0.00178	0.4839	0.8508	-0.056	-0.028	1835.9	1513.0	1722.4	1470.3	1450.3	1552.7
E011	chr5	132758556	132758824	TRUE	OK	1768.0	0.00268	0.3507	0.8076	0.079	0.040	2005.5	1546.4	1874.4	1683.8	1743.1	1754.8
E012	chr5	132758824	132759007	TRUE	OK	96.0	0.00986	0.3818	0.8176	0.191	0.096	83.8	99.1	99.7	75.5	99.9	118.0
E013	chr5	132760801	132760871	TRUE	OK	1174.2	0.0035	0.8172	0.9544	0.017	0.008	1365.6	1015.6	1285.2	1063.3	1137.9	1177.6
E014	chr5	132760871	132760992	TRUE	OK	1445.4	0.00207	0.769	0.941	0.019	0.009	1632.8	1285.7	1592.4	1361.1	1378.8	1421.2
E015	chr5	132761132	132761265	TRUE	OK	1627.3	0.00336	0.2726	0.783	0.102	0.051	1792.6	1363.9	1802.9	1560.7	1599.2	1644.6
E016	chr5	132761457	132761500	TRUE	OK	1137.5	0.00277	0.2413	0.7728	0.105	0.052	1259.1	961.4	1237.9	1065.3	1142.8	1158.3
E017	chr5	132761500	132761626	TRUE	OK	1363.4	0.00253	0.1961	0.7563	0.112	0.056	1465.2	1172.0	1501.8	1258.9	1348.5	1433.8
E018	chr5	132761799	132761896	TRUE	OK	956.8	0.00262	0.5666	0.8771	0.052	0.026	1039.3	855.0	1060.6	864.7	899.0	1021.9
E019	chr5	132762483	132762602	TRUE	OK	984.0	0.00504	0.1246	0.7198	0.188	0.094	1047.1	801.9	1064.6	911.4	958.7	1120.6
E020	chr5	132762602	132762645	TRUE	OK	756.3	0.0106	0.05632	0.641	0.321	0.161	832.2	529.7	776.6	738.6	753.1	907.9
E021	chr5	132763705	132763768	TRUE	OK	758.9	0.00798	0.02874	0.5463	0.325	0.162	823.3	545.3	774.6	774.4	755.0	880.8
E022	chr5	132763768	132763823	TRUE	OK	831.4	0.00738	0.01588	0.4568	0.346	0.173	883.5	596.4	853.1	833.9	852.0	969.7
E023	chr5	132763823	132763886	TRUE	OK	865.9	0.00584	0.03879	0.589	0.263	0.132	940.7	650.7	907.5	862.7	877.4	956.2
E024	chr5	132763886	132763892	TRUE	OK	506.7	0.00972	0.09062	0.6892	0.268	0.134	562.0	349.3	543.9	538.1	509.2	537.6
E025	chr5	132763960	132764038	TRUE	OK	62.0	0.0162	0.422	0.8305	0.205	0.102	60.1	43.8	77.6	45.7	72.5	72.5
E026	chr5	132764038	132764064	TRUE	OK	61.7	0.0241	0.6544	0.9059	0.083	0.041	59.2	37.5	91.7	53.6	63.7	64.8
E027	chr5	132764064	132764223	TRUE	OK	78.3	0.0102	0.386	0.819	0.170	0.085	80.9	53.2	97.7	71.5	89.1	77.3
E028	chr5	132764223	132764258	TRUE	OK	747.2	0.00788	0.2278	0.7682	0.166	0.083	846.0	554.7	823.9	754.5	732.5	771.5
E029	chr5	132764258	132764390	TRUE	OK	916.8	0.0125	0.4091	0.8268	0.129	0.064	1052.1	655.9	1056.6	964.0	856.9	915.6
E030	chr5	132764390	132764419	TRUE	OK	702.0	0.0144	0.3312	0.8012	0.170	0.085	815.4	485.9	785.6	760.5	641.4	723.2
E031	chr5	132765408	132765474	TRUE	OK	455.4	0.0158	0.2803	0.7851	0.197	0.099	525.5	297.2	516.7	488.5	428.9	475.7
E032	chr5	132765474	132765529	TRUE	OK	337.0	0.0196	0.6299	0.8976	0.070	0.035	419.1	216.9	397.9	347.5	304.6	336.5
E033	chr5	132773922	132774212	FALSE	LOW_COUNTS_INDEP_FILTER	4.5	0.0345	0.9867	NA	NA	NA	6.9	3.1	4.0	6.0	2.9	3.9
E034	chr5	132775734	132775966	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.0974	0.01413	NA	NA	NA	0.0	1.0	0.0	2.0	4.9	1.9
E035	chr5	132777107	132777220	TRUE	OK	208.0	0.012	0.6546	0.9059	0.059	0.030	254.4	143.9	241.7	199.6	205.6	203.0
E036	chr5	132777220	132777221	TRUE	OK	66.6	0.0215	0.3896	0.8201	-0.249	-0.125	78.9	54.2	92.7	65.5	68.5	39.6
E037	chr5	132777221	132777238	TRUE	OK	63.8	0.0195	0.2965	0.7908	-0.288	-0.144	76.9	54.2	87.6	57.6	68.5	37.7
E038	chr5	132777238	132777239	TRUE	OK	39.4	0.0818	0.3923	0.8213	-0.387	-0.193	43.4	28.2	67.5	28.8	53.9	14.5
E039	chr5	132777239	132777248	TRUE	OK	37.7	0.0837	0.4528	0.8403	-0.356	-0.178	41.4	25.0	65.5	27.8	51.9	14.5
E040	chr5	132777248	132777261	TRUE	OK	23.7	0.131	0.9331	0.9842	-0.002	-0.001	30.6	9.4	34.2	18.9	40.2	8.7
E041	chr5	132777261	132777344	TRUE	OK	16.5	0.148	0.902	0.9767	0.102	0.051	25.6	5.2	19.1	14.9	28.4	5.8
E042	chr5	132777344	132777375	FALSE	LOW_COUNTS_INDEP_FILTER	6.0	0.256	0.8365	NA	NA	NA	6.9	2.1	7.1	7.9	11.8	0.0
E043	chr5	132777375	132777421	FALSE	LOW_COUNTS_INDEP_FILTER	6.0	0.284	0.8615	NA	NA	NA	2.0	6.3	8.1	7.9	11.8	0.0
E044	chr5	132777675	132777757	FALSE	LOW_COUNTS_INDEP_FILTER	8.6	0.101	0.5961	NA	NA	NA	14.8	2.1	14.1	9.9	5.9	4.8
E045	chr5	132777757	132777869	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.132	0.4428	NA	NA	NA	12.8	1.0	13.1	6.0	2.9	5.8
E046	chr5	132777869	132777894	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.0544	0.9133	NA	NA	NA	3.0	1.0	4.0	2.0	2.0	2.9
E047	chr5	132777894	132778009	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0378	0.6082	NA	NA	NA	3.0	2.1	5.0	4.0	2.9	4.8
E048	chr5	132778084	132778216	FALSE	LOW_COUNTS_INDEP_FILTER	3.9	0.149	0.3683	NA	NA	NA	5.9	2.1	1.0	1.0	5.9	7.7
E049	chr5	132807065	132807241	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J050	chr5	132752178	132760801	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.166	0.1409	NA	NA	NA	0.0	4.2	4.0	0.0	1.0	1.0
J051	chr5	132752181	132760801	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.0213	0.7428	NA	NA	NA	3.9	3.1	5.0	4.0	4.9	3.9
J052	chr5	132754520	132760801	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J053	chr5	132758556	132760801	TRUE	OK	28.6	0.0127	0.7057	0.9215	-0.114	-0.057	38.5	32.3	22.2	29.8	23.5	25.1
J054	chr5	132758824	132760801	TRUE	OK	738.2	0.00543	0.6304	0.8978	0.051	0.025	894.3	612.1	773.5	673.1	731.5	744.5
J055	chr5	132759007	132760801	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J056	chr5	132760992	132761132	TRUE	OK	923.5	0.00225	0.3283	0.8005	0.081	0.041	1019.5	794.6	1012.3	899.5	869.6	945.6
J057	chr5	132761265	132761457	TRUE	OK	890.3	0.00357	0.09093	0.6899	0.172	0.086	971.2	711.1	964.9	853.8	922.5	918.5
J058	chr5	132761626	132761799	TRUE	OK	727.6	0.00214	0.3924	0.8214	0.077	0.038	752.3	664.2	812.8	649.3	697.2	789.9
J059	chr5	132761626	132762483	FALSE	LOW_COUNTS_INDEP_FILTER	1.6	0.354	0.8097	NA	NA	NA	4.9	1.0	0.0	0.0	1.0	2.9
J060	chr5	132761896	132762483	TRUE	OK	596.9	0.00304	0.5482	0.8715	0.063	0.031	645.8	530.7	659.7	537.1	550.4	657.4
J061	chr5	132762645	132763705	TRUE	OK	627.0	0.0097	0.03068	0.5547	0.355	0.177	685.3	436.9	627.5	617.5	636.5	758.0
J062	chr5	132763886	132764223	TRUE	OK	169.1	0.00208	0.146	0.733	0.172	0.086	175.5	144.9	180.3	149.9	171.4	192.4
J063	chr5	132763892	132764038	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.588	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J064	chr5	132763892	132764223	TRUE	OK	422.3	0.0108	0.1584	0.7383	0.233	0.117	477.2	292.0	457.3	462.6	417.2	427.3
J065	chr5	132764064	132764258	TRUE	OK	10.1	0.065	0.5364	0.8676	-0.435	-0.218	9.9	5.2	21.2	10.9	5.9	7.7
J066	chr5	132764419	132765408	TRUE	OK	405.5	0.0176	0.2052	0.7598	0.254	0.127	461.5	256.5	451.2	445.8	376.0	441.8
J067	chr5	132765529	132773922	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0891	0.9422	NA	NA	NA	2.0	2.1	0.0	2.0	0.0	1.9
J068	chr5	132765529	132775734	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J069	chr5	132765529	132777107	TRUE	OK	185.6	0.00861	0.6785	0.9131	0.053	0.027	222.8	134.5	214.5	168.8	187.0	185.6
J070	chr5	132765529	132777675	FALSE	LOW_COUNTS_INDEP_FILTER	2.8	0.0843	0.3847	NA	NA	NA	3.9	1.0	6.0	4.0	1.0	1.0
J071	chr5	132765529	132777757	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.17	0.6297	NA	NA	NA	1.0	0.0	1.0	0.0	0.0	1.0
J072	chr5	132765529	132807065	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J073	chr5	132774212	132777107	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.603	0.3802	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
J074	chr5	132777894	132778084	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N075	chr5	132758824	132759580	TRUE	OK	11.0	0.0123	4.134e-06	0.002716	2.010	1.005	5.9	2.1	6.0	13.9	15.7	22.2
N076	chr5	132758824	132759936	TRUE	OK	47.8	0.017	0.01825	0.4775	0.637	0.318	54.2	25.0	39.3	49.6	51.9	66.7
N077	chr5	132759724	132759936	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0152	0.07405	NA	NA	NA	5.9	6.3	8.1	10.9	14.7	6.8

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000164402.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE