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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 40825261 | 40827702 | TRUE | OK | 1479.3 | 0.00998 | 0.6422 | 0.9018 | 0.098 | 0.049 | 1445.5 | 1459.8 | 1466.5 | 1445.5 | 1545.3 | 1513.1 |
E002 | chr5 | 40827702 | 40827951 | TRUE | OK | 391.2 | 0.0148 | 0.335 | 0.8025 | 0.220 | 0.110 | 360.9 | 339.9 | 404.9 | 400.1 | 419.1 | 422.5 |
E003 | chr5 | 40827951 | 40831322 | TRUE | OK | 646.4 | 0.0314 | 0.5792 | 0.8811 | -0.164 | -0.082 | 723.7 | 539.1 | 817.9 | 568.9 | 620.9 | 608.1 |
E004 | chr5 | 40831322 | 40831394 | TRUE | OK | 62.2 | 0.0393 | 0.8486 | 0.9628 | 0.061 | 0.031 | 56.2 | 44.8 | 84.6 | 70.5 | 58.8 | 58.0 |
E005 | chr5 | 40831394 | 40832102 | TRUE | OK | 263.0 | 0.0359 | 0.6771 | 0.9127 | -0.147 | -0.074 | 268.2 | 210.6 | 363.6 | 243.2 | 239.9 | 252.3 |
E006 | chr5 | 40832102 | 40832441 | TRUE | OK | 182.6 | 0.0294 | 0.9628 | 0.9913 | -0.009 | -0.004 | 192.3 | 144.9 | 221.6 | 169.8 | 179.2 | 187.6 |
E007 | chr5 | 40832441 | 40832447 | TRUE | OK | 195.5 | 0.0299 | 0.1617 | 0.74 | 0.429 | 0.214 | 177.5 | 131.4 | 201.4 | 232.3 | 227.2 | 203.0 |
E008 | chr5 | 40832447 | 40832457 | TRUE | OK | 933.3 | 0.00316 | 0.1627 | 0.7405 | -0.138 | -0.069 | 875.6 | 1184.5 | 918.6 | 881.6 | 843.2 | 896.3 |
E009 | chr5 | 40832457 | 40832555 | TRUE | OK | 11729.9 | 0.00882 | 0.1152 | 0.7124 | -0.263 | -0.131 | 10967.4 | 15944.2 | 10825.6 | 11148.0 | 10379.4 | 11114.8 |
E010 | chr5 | 40832555 | 40832573 | TRUE | OK | 12778.4 | 0.00989 | 0.08956 | 0.6889 | -0.300 | -0.150 | 11955.4 | 17423.8 | 11883.2 | 12097.1 | 11203.9 | 12106.7 |
E011 | chr5 | 40833878 | 40833960 | TRUE | OK | 11.1 | 0.0169 | 0.07375 | 0.6685 | 0.752 | 0.376 | 9.9 | 11.5 | 4.0 | 11.9 | 12.7 | 16.4 |
E012 | chr5 | 40833960 | 40834037 | TRUE | OK | 22.7 | 0.0194 | 0.7803 | 0.9446 | 0.110 | 0.055 | 23.7 | 24.0 | 19.1 | 29.8 | 16.6 | 23.2 |
E013 | chr5 | 40834037 | 40834180 | TRUE | OK | 731.9 | 0.0082 | 0.0998 | 0.6978 | -0.259 | -0.130 | 614.3 | 1059.4 | 752.4 | 639.4 | 800.1 | 526.0 |
E014 | chr5 | 40834180 | 40834265 | TRUE | OK | 25690.3 | 0.00845 | 0.876 | 0.97 | 0.001 | 0.001 | 22067.9 | 32981.2 | 23360.5 | 24004.7 | 27149.6 | 24578.0 |
E015 | chr5 | 40834470 | 40834606 | TRUE | OK | 25201.9 | 0.0053 | 0.1308 | 0.7239 | 0.168 | 0.083 | 21468.4 | 32005.2 | 22797.5 | 23682.0 | 27057.5 | 24200.9 |
E016 | chr5 | 40834606 | 40834607 | TRUE | OK | 393.5 | 0.0155 | 0.6862 | 0.9156 | 0.098 | 0.049 | 283.0 | 527.6 | 351.5 | 364.4 | 535.7 | 298.8 |
E017 | chr5 | 40835018 | 40835182 | TRUE | OK | 54.0 | 0.0053 | 4.052e-06 | 0.002673 | -0.953 | -0.476 | 63.1 | 93.8 | 59.4 | 41.7 | 31.3 | 34.8 |
E018 | chr5 | 40835182 | 40835186 | TRUE | OK | 9185.0 | 0.00221 | 0.001292 | 0.1522 | 0.265 | 0.132 | 7814.1 | 10499.1 | 7979.2 | 8791.2 | 10291.3 | 9735.1 |
E019 | chr5 | 40835186 | 40835212 | TRUE | OK | 8832.7 | 0.00227 | 0.001974 | 0.1892 | 0.258 | 0.129 | 7529.2 | 10139.4 | 7632.7 | 8430.8 | 9882.9 | 9381.2 |
E020 | chr5 | 40835212 | 40835222 | TRUE | OK | 418.9 | 0.00502 | 0.1202 | 0.7161 | -0.217 | -0.109 | 405.2 | 601.6 | 365.6 | 382.2 | 367.2 | 391.6 |
J021 | chr5 | 40827951 | 40831322 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J022 | chr5 | 40831394 | 40832441 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0716 | 0.6755 | NA | NA | NA | 9.9 | 4.2 | 9.1 | 13.9 | 5.9 | 7.7 |
J023 | chr5 | 40832573 | 40833960 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.0298 | 0.7028 | NA | NA | NA | 6.9 | 4.2 | 7.1 | 9.9 | 4.9 | 5.8 |
J024 | chr5 | 40832573 | 40834180 | TRUE | OK | 12653.5 | 0.00994 | 0.1008 | 0.6987 | -0.292 | -0.146 | 11774.9 | 17284.1 | 11759.3 | 11954.2 | 11082.5 | 12066.1 |
J025 | chr5 | 40832573 | 40834470 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.326 | 0.1235 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 5.0 | 2.0 | 0.0 |
J026 | chr5 | 40834037 | 40834180 | TRUE | OK | 12.3 | 0.0465 | 0.8154 | 0.954 | 0.162 | 0.081 | 11.8 | 11.5 | 12.1 | 19.9 | 6.9 | 11.6 |
J027 | chr5 | 40834265 | 40834470 | TRUE | OK | 23500.0 | 0.00364 | 0.08753 | 0.6861 | 0.157 | 0.078 | 20004.1 | 29793.6 | 21140.6 | 22070.7 | 25094.0 | 22896.6 |
J028 | chr5 | 40834606 | 40835018 | TRUE | OK | 17.7 | 0.00866 | 0.06602 | 0.656 | -0.606 | -0.303 | 15.8 | 32.3 | 17.1 | 15.9 | 10.8 | 14.5 |
J029 | chr5 | 40834606 | 40835182 | TRUE | OK | 9182.4 | 0.00197 | 0.000659 | 0.1042 | 0.266 | 0.133 | 7813.1 | 10491.8 | 7976.2 | 8788.2 | 10290.3 | 9735.1 |
N030 | chr5 | 40827951 | 40832441 | TRUE | OK | 118.0 | 0.0148 | 0.002853 | 0.2288 | 0.708 | 0.354 | 85.8 | 82.4 | 106.8 | 150.9 | 152.8 | 129.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000145592.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |