Raw Counts Table (ENSG00000164134.13)
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Raw Counts |
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 |
E001 | chr4 | 139301504 | 139301587 | TRUE | OK | 347.6 | 0.00543 | 0.178 | 0.7482 | 0.181 | 0.090 | 474.0 | 314.0 | 392.0 | 346.0 | 265.0 | 303.0 |
E002 | chr4 | 139301587 | 139301831 | TRUE | OK | 875.8 | 0.0043 | 0.3752 | 0.815 | 0.097 | 0.049 | 1188.0 | 826.0 | 1034.0 | 823.0 | 661.0 | 741.0 |
E003 | chr4 | 139301983 | 139302181 | TRUE | OK | 34.2 | 0.00536 | 8.78e-05 | 0.02835 | 0.921 | 0.461 | 33.0 | 24.0 | 33.0 | 42.0 | 35.0 | 40.0 |
E004 | chr4 | 139334173 | 139334258 | TRUE | OK | 625.2 | 0.00631 | 0.6039 | 0.8892 | 0.062 | 0.031 | 865.0 | 567.0 | 764.0 | 569.0 | 458.0 | 542.0 |
E005 | chr4 | 139336847 | 139336872 | TRUE | OK | 450.8 | 0.00396 | 0.7754 | 0.9429 | 0.029 | 0.014 | 605.0 | 427.0 | 564.0 | 413.0 | 326.0 | 378.0 |
E006 | chr4 | 139336872 | 139336952 | TRUE | OK | 654.1 | 0.00631 | 0.4689 | 0.8458 | 0.090 | 0.045 | 859.0 | 582.0 | 839.0 | 600.0 | 490.0 | 569.0 |
E007 | chr4 | 139340911 | 139341069 | TRUE | OK | 898.1 | 0.00809 | 0.4829 | 0.8504 | 0.094 | 0.047 | 1195.0 | 784.0 | 1152.0 | 806.0 | 673.0 | 800.0 |
E008 | chr4 | 139341069 | 139341073 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0405 | 0.7258 | NA | NA | NA | 12.0 | 7.0 | 16.0 | 5.0 | 11.0 | 5.0 |
E009 | chr4 | 139342825 | 139342960 | TRUE | OK | 772.1 | 0.00793 | 0.415 | 0.8287 | 0.108 | 0.054 | 1072.0 | 671.0 | 938.0 | 699.0 | 595.0 | 677.0 |
E010 | chr4 | 139344185 | 139344339 | TRUE | OK | 726.8 | 0.00545 | 0.5777 | 0.8807 | 0.061 | 0.030 | 983.0 | 670.0 | 901.0 | 625.0 | 559.0 | 639.0 |
E011 | chr4 | 139349461 | 139349581 | TRUE | OK | 719.9 | 0.00547 | 0.5061 | 0.8579 | 0.074 | 0.037 | 974.0 | 653.0 | 894.0 | 637.0 | 567.0 | 610.0 |
E012 | chr4 | 139351190 | 139351286 | TRUE | OK | 638.2 | 0.00537 | 0.1634 | 0.7408 | 0.169 | 0.085 | 845.0 | 567.0 | 765.0 | 574.0 | 527.0 | 567.0 |
E013 | chr4 | 139351504 | 139351534 | TRUE | OK | 463.8 | 0.0058 | 0.1296 | 0.723 | 0.196 | 0.098 | 604.0 | 405.0 | 560.0 | 416.0 | 405.0 | 405.0 |
E014 | chr4 | 139351534 | 139351611 | TRUE | OK | 607.1 | 0.00511 | 0.09683 | 0.6958 | 0.201 | 0.101 | 786.0 | 533.0 | 733.0 | 559.0 | 505.0 | 542.0 |
E015 | chr4 | 139351611 | 139351613 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.0718 | 0.6146 | NA | NA | NA | 6.0 | 9.0 | 10.0 | 3.0 | 9.0 | 2.0 |
E016 | chr4 | 139354025 | 139354098 | TRUE | OK | 549.9 | 0.00467 | 0.1477 | 0.7338 | 0.171 | 0.086 | 691.0 | 490.0 | 692.0 | 514.0 | 437.0 | 488.0 |
E017 | chr4 | 139356488 | 139356583 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.101 | 0.6288 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 2.0 | 1.0 | 1.0 |
E018 | chr4 | 139357385 | 139357555 | TRUE | OK | 839.1 | 0.0043 | 0.6446 | 0.9027 | 0.049 | 0.024 | 1079.0 | 797.0 | 1080.0 | 765.0 | 609.0 | 720.0 |
E019 | chr4 | 139359742 | 139359857 | TRUE | OK | 973.4 | 0.00628 | 0.5635 | 0.8761 | 0.069 | 0.034 | 1297.0 | 878.0 | 1240.0 | 900.0 | 726.0 | 820.0 |
E020 | chr4 | 139359857 | 139359895 | TRUE | OK | 845.8 | 0.00513 | 0.6142 | 0.8926 | 0.055 | 0.027 | 1136.0 | 780.0 | 1061.0 | 773.0 | 630.0 | 712.0 |
E021 | chr4 | 139360499 | 139360628 | TRUE | OK | 1344.5 | 0.00323 | 0.6519 | 0.905 | -0.053 | -0.027 | 1810.0 | 1335.0 | 1713.0 | 1158.0 | 1027.0 | 1044.0 |
E022 | chr4 | 139361723 | 139361937 | TRUE | OK | 1230.1 | 0.00132 | 0.3617 | 0.8113 | -0.068 | -0.034 | 1634.0 | 1324.0 | 1499.0 | 1019.0 | 909.0 | 1011.0 |
E023 | chr4 | 139370210 | 139370404 | TRUE | OK | 1363.0 | 0.00381 | 0.9882 | 0.9972 | -0.001 | -0.001 | 1616.0 | 1640.0 | 1594.0 | 1151.0 | 1012.0 | 1174.0 |
E024 | chr4 | 139376364 | 139376376 | TRUE | OK | 1039.8 | 0.00577 | 0.8816 | 0.9714 | -0.021 | -0.010 | 1218.0 | 1313.0 | 1185.0 | 874.0 | 764.0 | 889.0 |
E025 | chr4 | 139376376 | 139376473 | TRUE | OK | 1203.2 | 0.00438 | 0.747 | 0.9345 | -0.037 | -0.018 | 1439.0 | 1487.0 | 1392.0 | 1018.0 | 872.0 | 1017.0 |
E026 | chr4 | 139378755 | 139378854 | TRUE | OK | 1101.6 | 0.00142 | 0.9164 | 0.9804 | -0.008 | -0.004 | 1364.0 | 1260.0 | 1306.0 | 933.0 | 828.0 | 929.0 |
E027 | chr4 | 139378854 | 139379335 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.0 | 0.055 | 0.4458 | NA | NA | NA | 5.0 | 7.0 | 13.0 | 4.0 | 10.0 | 9.0 |
E028 | chr4 | 139384831 | 139384834 | TRUE | OK | 414.1 | 0.00157 | 0.5311 | 0.8658 | -0.059 | -0.029 | 559.0 | 441.0 | 499.0 | 351.0 | 303.0 | 337.0 |
E029 | chr4 | 139384834 | 139384835 | TRUE | OK | 427.3 | 0.00163 | 0.3009 | 0.7917 | -0.097 | -0.048 | 576.0 | 458.0 | 528.0 | 344.0 | 317.0 | 346.0 |
E030 | chr4 | 139384835 | 139384978 | TRUE | OK | 845.1 | 0.00289 | 0.9292 | 0.9833 | 0.003 | 0.002 | 1136.0 | 835.0 | 1041.0 | 741.0 | 621.0 | 711.0 |
E031 | chr4 | 139386132 | 139386167 | TRUE | OK | 622.6 | 0.0034 | 0.9179 | 0.9807 | 0.009 | 0.005 | 828.0 | 619.0 | 768.0 | 556.0 | 435.0 | 540.0 |
E032 | chr4 | 139386167 | 139386230 | TRUE | OK | 681.3 | 0.00275 | 0.975 | 0.9939 | 0.005 | 0.002 | 885.0 | 699.0 | 842.0 | 619.0 | 469.0 | 584.0 |
E033 | chr4 | 139386230 | 139386547 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0787 | 0.5585 | NA | NA | NA | 3.0 | 0.0 | 3.0 | 3.0 | 2.0 | 1.0 |
E034 | chr4 | 139387883 | 139391368 | TRUE | OK | 3882.2 | 0.00573 | 0.3643 | 0.8118 | -0.112 | -0.056 | 4788.0 | 4780.0 | 4514.0 | 3360.0 | 2889.0 | 2975.0 |
E035 | chr4 | 139391368 | 139391384 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.227 | 0.5457 | NA | NA | NA | 1.0 | 2.0 | 4.0 | 0.0 | 0.0 | 3.0 |
E036 | chr4 | 139393590 | 139393722 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.1 | 0.347 | 0.2962 | NA | NA | NA | 3.0 | 0.0 | 3.0 | 10.0 | 0.0 | 3.0 |
E037 | chr4 | 139404397 | 139404490 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.0323 | 0.03369 | NA | NA | NA | 6.0 | 4.0 | 2.0 | 10.0 | 5.0 | 5.0 |
E038 | chr4 | 139417865 | 139420033 | TRUE | OK | 10.5 | 0.0565 | 0.2119 | 0.7622 | 0.674 | 0.337 | 7.0 | 15.0 | 8.0 | 10.0 | 16.0 | 7.0 |
J039 | chr4 | 139301831 | 139334173 | TRUE | OK | 421.5 | 0.00716 | 0.7574 | 0.9376 | 0.032 | 0.016 | 597.0 | 373.0 | 523.0 | 375.0 | 311.0 | 360.0 |
J040 | chr4 | 139302181 | 139334173 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.56 | 0.4174 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J041 | chr4 | 139334258 | 139336847 | TRUE | OK | 378.3 | 0.00416 | 0.829 | 0.9574 | 0.021 | 0.011 | 509.0 | 357.0 | 476.0 | 340.0 | 267.0 | 328.0 |
J042 | chr4 | 139336952 | 139340911 | TRUE | OK | 534.4 | 0.00682 | 0.408 | 0.8263 | 0.110 | 0.055 | 687.0 | 471.0 | 694.0 | 484.0 | 397.0 | 486.0 |
J043 | chr4 | 139341069 | 139342825 | TRUE | OK | 481.5 | 0.012 | 0.3916 | 0.821 | 0.140 | 0.070 | 666.0 | 388.0 | 603.0 | 433.0 | 364.0 | 449.0 |
J044 | chr4 | 139342960 | 139344185 | TRUE | OK | 400.0 | 0.00334 | 0.592 | 0.8853 | 0.053 | 0.026 | 546.0 | 381.0 | 480.0 | 347.0 | 307.0 | 347.0 |
J045 | chr4 | 139344339 | 139349461 | TRUE | OK | 441.7 | 0.00568 | 0.427 | 0.8321 | 0.095 | 0.048 | 594.0 | 394.0 | 549.0 | 381.0 | 353.0 | 390.0 |
J046 | chr4 | 139349581 | 139351190 | TRUE | OK | 461.4 | 0.00643 | 0.3408 | 0.8043 | 0.122 | 0.061 | 630.0 | 401.0 | 563.0 | 418.0 | 364.0 | 404.0 |
J047 | chr4 | 139351286 | 139351504 | TRUE | OK | 381.9 | 0.00446 | 0.1564 | 0.7375 | 0.169 | 0.084 | 504.0 | 346.0 | 451.0 | 332.0 | 328.0 | 340.0 |
J048 | chr4 | 139351611 | 139354025 | TRUE | OK | 394.9 | 0.00198 | 0.03705 | 0.5831 | 0.195 | 0.097 | 486.0 | 366.0 | 482.0 | 368.0 | 324.0 | 352.0 |
J049 | chr4 | 139354098 | 139356488 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.113 | 0.9849 | NA | NA | NA | 1.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 |
J050 | chr4 | 139354098 | 139357385 | TRUE | OK | 411.4 | 0.00536 | 0.2255 | 0.7671 | 0.160 | 0.080 | 518.0 | 368.0 | 519.0 | 396.0 | 301.0 | 376.0 |
J051 | chr4 | 139356583 | 139357385 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.26 | 0.1504 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 0.0 |
J052 | chr4 | 139357555 | 139359742 | TRUE | OK | 479.6 | 0.00447 | 0.9713 | 0.9931 | -0.009 | -0.004 | 632.0 | 458.0 | 625.0 | 430.0 | 331.0 | 410.0 |
J053 | chr4 | 139359895 | 139360499 | TRUE | OK | 727.3 | 0.00559 | 0.3768 | 0.8157 | 0.105 | 0.052 | 975.0 | 648.0 | 903.0 | 675.0 | 565.0 | 614.0 |
J054 | chr4 | 139360628 | 139361723 | TRUE | OK | 820.3 | 0.00112 | 0.04692 | 0.6166 | -0.145 | -0.073 | 1123.0 | 876.0 | 1033.0 | 670.0 | 602.0 | 627.0 |
J055 | chr4 | 139361937 | 139370210 | TRUE | OK | 376.9 | 0.00376 | 0.3639 | 0.8118 | 0.107 | 0.054 | 473.0 | 410.0 | 421.0 | 307.0 | 296.0 | 361.0 |
J056 | chr4 | 139370404 | 139376364 | TRUE | OK | 954.1 | 0.00552 | 0.7474 | 0.9345 | -0.042 | -0.021 | 1123.0 | 1205.0 | 1100.0 | 794.0 | 685.0 | 821.0 |
J057 | chr4 | 139376473 | 139378755 | TRUE | OK | 837.9 | 0.00235 | 0.8902 | 0.9738 | -0.012 | -0.006 | 1030.0 | 995.0 | 966.0 | 714.0 | 612.0 | 717.0 |
J058 | chr4 | 139378854 | 139384831 | TRUE | OK | 402.5 | 0.00101 | 0.4424 | 0.8371 | -0.065 | -0.032 | 539.0 | 434.0 | 486.0 | 335.0 | 295.0 | 331.0 |
J059 | chr4 | 139378854 | 139384834 | TRUE | OK | 52.5 | 0.00343 | 0.06796 | 0.6595 | -0.361 | -0.180 | 70.0 | 62.0 | 73.0 | 31.0 | 38.0 | 41.0 |
J060 | chr4 | 139384978 | 139386132 | TRUE | OK | 501.7 | 0.00643 | 0.3516 | 0.8079 | 0.128 | 0.064 | 674.0 | 450.0 | 606.0 | 474.0 | 360.0 | 458.0 |
J061 | chr4 | 139386230 | 139387883 | TRUE | OK | 437.5 | 0.00148 | 0.4781 | 0.8489 | -0.061 | -0.031 | 562.0 | 473.0 | 549.0 | 378.0 | 294.0 | 374.0 |
J062 | chr4 | 139386230 | 139393590 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.527 | 0.408 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 |
J063 | chr4 | 139393722 | 139404397 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.572 | 0.2457 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
J064 | chr4 | 139404490 | 139417865 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N065 | chr4 | 139295960 | 139302415 | TRUE | OK | 73.1 | 0.0102 | 6.092e-07 | 0.0005564 | 1.088 | 0.544 | 68.0 | 66.0 | 46.0 | 84.0 | 78.0 | 100.0 |
N066 | chr4 | 139297443 | 139302415 | TRUE | OK | 14.6 | 0.0393 | 0.0939 | 0.6923 | 0.732 | 0.366 | 8.0 | 21.0 | 12.0 | 14.0 | 15.0 | 18.0 |
Color Codes |
NO TEST
|
p > 0.05
|
p < 0.05
|
p < 0.005
|
p < 5e-04
|
p < 5e-05
|