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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Mean Normalized Coverage Counts | |
no | yes | ||||||||||||
E001 | chr3 | 33277024 | 33277096 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E002 | chr3 | 33277421 | 33277444 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.319 | 0.5895 | NA | NA | NA | NA | NA |
E003 | chr3 | 33277444 | 33277445 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.319 | 0.5895 | NA | NA | NA | NA | NA |
E004 | chr3 | 33277445 | 33277450 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0535 | 0.19 | NA | NA | NA | NA | NA |
E005 | chr3 | 33277450 | 33277452 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.048 | 0.0547 | NA | NA | NA | NA | NA |
E006 | chr3 | 33277452 | 33277465 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.4 | 0.0192 | 0.5522 | NA | NA | NA | NA | NA |
E007 | chr3 | 33277465 | 33277471 | TRUE | OK | 10.9 | 0.0305 | 0.5174 | 0.8615 | 0.298 | 0.149 | 8.1 | 13.7 |
E008 | chr3 | 33277471 | 33277475 | TRUE | OK | 15.8 | 0.011 | 0.162 | 0.7401 | 0.495 | 0.247 | 10.8 | 20.9 |
E009 | chr3 | 33277475 | 33277476 | TRUE | OK | 15.8 | 0.011 | 0.162 | 0.7401 | 0.495 | 0.247 | 10.8 | 20.9 |
E010 | chr3 | 33277476 | 33277515 | TRUE | OK | 47.0 | 0.0127 | 0.003415 | 0.2481 | 0.775 | 0.387 | 28.6 | 65.6 |
E011 | chr3 | 33278172 | 33278393 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0975 | 0.1056 | NA | NA | NA | NA | NA |
E012 | chr3 | 33289649 | 33289668 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E013 | chr3 | 33289668 | 33289795 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E014 | chr3 | 33297663 | 33297725 | TRUE | OK | 65.7 | 0.00612 | 0.004232 | 0.274 | 0.585 | 0.292 | 43.8 | 87.8 |
E015 | chr3 | 33297725 | 33297803 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.425 | 0.8937 | NA | NA | NA | NA | NA |
E016 | chr3 | 33297868 | 33297962 | TRUE | OK | 17.5 | 0.0106 | 0.1868 | 0.7516 | 0.454 | 0.227 | 12.1 | 22.9 |
E017 | chr3 | 33300521 | 33300571 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
E018 | chr3 | 33303073 | 33303160 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.823 | 0.4599 | NA | NA | NA | NA | NA |
E019 | chr3 | 33317476 | 33317613 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.254 | 0.8114 | NA | NA | NA | NA | NA |
E020 | chr3 | 33358966 | 33359021 | TRUE | OK | 75.4 | 0.00408 | 0.09729 | 0.6964 | 0.298 | 0.149 | 56.6 | 94.3 |
E021 | chr3 | 33359282 | 33359357 | TRUE | OK | 93.4 | 0.00405 | 0.08298 | 0.6811 | 0.294 | 0.147 | 70.4 | 116.5 |
E022 | chr3 | 33359357 | 33359358 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.057 | 0.2933 | NA | NA | NA | NA | NA |
E023 | chr3 | 33364335 | 33364624 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.093 | 0.4521 | NA | NA | NA | NA | NA |
E024 | chr3 | 33364624 | 33364719 | TRUE | OK | 115.1 | 0.00628 | 0.9539 | 0.9894 | 0.001 | 0.000 | 96.6 | 133.8 |
E025 | chr3 | 33372340 | 33372675 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0683 | 0.5839 | NA | NA | NA | NA | NA |
E026 | chr3 | 33372987 | 33373020 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.564 | 0.7594 | NA | NA | NA | NA | NA |
E027 | chr3 | 33373020 | 33373091 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.337 | 0.7937 | NA | NA | NA | NA | NA |
E028 | chr3 | 33373091 | 33373160 | TRUE | OK | 108.9 | 0.00924 | 0.9498 | 0.9883 | -0.026 | -0.013 | 92.2 | 125.7 |
E029 | chr3 | 33373240 | 33373259 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0839 | 0.3101 | NA | NA | NA | NA | NA |
E030 | chr3 | 33373259 | 33373275 | TRUE | OK | 79.3 | 0.016 | 0.5123 | 0.86 | -0.195 | -0.098 | 71.3 | 87.5 |
E031 | chr3 | 33373275 | 33373295 | TRUE | OK | 85.3 | 0.0193 | 0.6994 | 0.9197 | -0.140 | -0.070 | 75.2 | 95.7 |
E032 | chr3 | 33373295 | 33373302 | TRUE | OK | 84.3 | 0.0223 | 0.9272 | 0.9828 | -0.069 | -0.034 | 72.5 | 96.3 |
E033 | chr3 | 33373302 | 33373303 | TRUE | OK | 78.5 | 0.0299 | 0.9712 | 0.9931 | -0.050 | -0.025 | 67.1 | 90.1 |
E034 | chr3 | 33373303 | 33373311 | TRUE | OK | 80.0 | 0.0285 | 0.9161 | 0.9803 | -0.026 | -0.013 | 67.8 | 92.4 |
E035 | chr3 | 33373311 | 33373319 | TRUE | OK | 79.6 | 0.0276 | 0.9158 | 0.9802 | -0.023 | -0.012 | 67.4 | 92.1 |
E036 | chr3 | 33373319 | 33373355 | TRUE | OK | 78.7 | 0.0264 | 0.8423 | 0.9612 | -0.114 | -0.057 | 68.8 | 88.8 |
E037 | chr3 | 33373355 | 33373577 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0412 | 0.5155 | NA | NA | NA | NA | NA |
E038 | chr3 | 33373577 | 33373601 | TRUE | OK | 73.9 | 0.0209 | 0.8962 | 0.9752 | -0.003 | -0.002 | 62.1 | 85.9 |
E039 | chr3 | 33373601 | 33373618 | TRUE | OK | 68.5 | 0.0163 | 0.8076 | 0.952 | -0.093 | -0.047 | 59.5 | 77.7 |
E040 | chr3 | 33373618 | 33373639 | TRUE | OK | 68.8 | 0.021 | 0.9405 | 0.9859 | -0.016 | -0.008 | 58.1 | 79.7 |
E041 | chr3 | 33373639 | 33373704 | TRUE | OK | 85.3 | 0.0139 | 0.5049 | 0.8573 | 0.133 | 0.066 | 68.2 | 102.5 |
E042 | chr3 | 33373846 | 33373850 | TRUE | OK | 61.2 | 0.0089 | 0.2845 | 0.7864 | 0.227 | 0.114 | 47.1 | 75.4 |
E043 | chr3 | 33373850 | 33373870 | TRUE | OK | 74.1 | 0.00441 | 0.2831 | 0.786 | 0.192 | 0.096 | 57.9 | 90.4 |
E044 | chr3 | 33373870 | 33373921 | TRUE | OK | 74.2 | 0.00478 | 0.3534 | 0.8084 | 0.168 | 0.084 | 58.6 | 90.1 |
E045 | chr3 | 33373921 | 33373924 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.858 | 0.7581 | NA | NA | NA | NA | NA |
E046 | chr3 | 33375287 | 33375366 | TRUE | OK | 75.0 | 0.0039 | 0.6125 | 0.892 | 0.086 | 0.043 | 61.0 | 89.1 |
E047 | chr3 | 33375366 | 33375407 | TRUE | OK | 73.6 | 0.00476 | 0.3971 | 0.8229 | 0.158 | 0.079 | 58.3 | 89.1 |
E048 | chr3 | 33375407 | 33375418 | TRUE | OK | 61.7 | 0.00507 | 0.1302 | 0.7235 | 0.300 | 0.150 | 46.2 | 77.4 |
E049 | chr3 | 33377272 | 33377333 | TRUE | OK | 74.0 | 0.00429 | 0.006731 | 0.3343 | 0.501 | 0.250 | 51.2 | 97.0 |
E050 | chr3 | 33378102 | 33378147 | TRUE | OK | 84.0 | 0.00311 | 0.08678 | 0.6855 | 0.288 | 0.144 | 63.4 | 104.8 |
E051 | chr3 | 33378684 | 33378741 | TRUE | OK | 83.4 | 0.00312 | 0.08032 | 0.6774 | 0.295 | 0.148 | 62.7 | 104.1 |
E052 | chr3 | 33378741 | 33378834 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.3 | 0.0279 | 0.08879 | NA | NA | NA | NA | NA |
E053 | chr3 | 33382551 | 33383988 | TRUE | OK | 28.0 | 0.0101 | 0.4317 | 0.8336 | 0.221 | 0.110 | 21.6 | 34.6 |
E054 | chr3 | 33383988 | 33384201 | TRUE | OK | 106.7 | 0.00335 | 0.2221 | 0.7656 | 0.195 | 0.097 | 83.6 | 129.9 |
E055 | chr3 | 33385500 | 33385621 | TRUE | OK | 76.3 | 0.00349 | 0.3232 | 0.7988 | 0.176 | 0.088 | 60.0 | 92.7 |
E056 | chr3 | 33385621 | 33385728 | TRUE | OK | 70.8 | 0.00746 | 0.9162 | 0.9803 | -0.016 | -0.008 | 59.7 | 81.9 |
E057 | chr3 | 33385728 | 33385862 | TRUE | OK | 77.9 | 0.00334 | 0.1822 | 0.7499 | 0.232 | 0.116 | 60.0 | 96.0 |
E058 | chr3 | 33385862 | 33385948 | TRUE | OK | 69.8 | 0.00397 | 0.06893 | 0.6612 | 0.335 | 0.168 | 51.6 | 88.1 |
E059 | chr3 | 33385948 | 33386023 | TRUE | OK | 71.4 | 0.00377 | 0.7651 | 0.9397 | 0.057 | 0.028 | 58.7 | 84.2 |
E060 | chr3 | 33386023 | 33386476 | TRUE | OK | 173.0 | 0.016 | 0.1075 | 0.7053 | -0.383 | -0.191 | 162.1 | 183.8 |
E061 | chr3 | 33386476 | 33386625 | TRUE | OK | 47.4 | 0.00909 | 0.003412 | 0.248 | -0.697 | -0.348 | 50.3 | 44.4 |
E062 | chr3 | 33386625 | 33386633 | TRUE | OK | 9.9 | 0.0381 | 0.2793 | 0.7847 | -0.524 | -0.262 | 10.1 | 9.8 |
E063 | chr3 | 33386633 | 33387265 | TRUE | OK | 28.1 | 0.0273 | 0.09815 | 0.6967 | -0.592 | -0.296 | 29.0 | 27.1 |
E064 | chr3 | 33387265 | 33388092 | TRUE | OK | 23.8 | 0.00949 | 0.009557 | 0.3862 | -0.765 | -0.383 | 26.0 | 21.5 |
E065 | chr3 | 33403233 | 33403662 | TRUE | OK | 15.0 | 0.0121 | 0.3012 | 0.7918 | 0.374 | 0.187 | 10.8 | 19.3 |
J066 | chr3 | 33277096 | 33297663 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J067 | chr3 | 33277515 | 33297663 | TRUE | OK | 46.2 | 0.0103 | 0.003562 | 0.2529 | 0.735 | 0.367 | 28.6 | 64.0 |
J068 | chr3 | 33278393 | 33297663 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.556 | 0.726 | NA | NA | NA | NA | NA |
J069 | chr3 | 33289795 | 33297663 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J070 | chr3 | 33297725 | 33297868 | TRUE | OK | 12.6 | 0.0116 | 0.006583 | 0.3318 | 1.111 | 0.556 | 6.4 | 18.9 |
J071 | chr3 | 33297725 | 33358966 | TRUE | OK | 51.6 | 0.00386 | 0.03039 | 0.5532 | 0.439 | 0.220 | 36.4 | 66.9 |
J072 | chr3 | 33297725 | 33359282 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J073 | chr3 | 33297725 | 33364624 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.7312 | NA | NA | NA | NA | NA |
J074 | chr3 | 33297725 | 33373091 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.162 | 0.7703 | NA | NA | NA | NA | NA |
J075 | chr3 | 33297803 | 33358966 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.613 | 0.4944 | NA | NA | NA | NA | NA |
J076 | chr3 | 33297962 | 33300521 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J077 | chr3 | 33297962 | 33303073 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.539 | 0.4197 | NA | NA | NA | NA | NA |
J078 | chr3 | 33297962 | 33317476 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.264 | 0.8016 | NA | NA | NA | NA | NA |
J079 | chr3 | 33297962 | 33358966 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.4 | 0.0135 | 0.7919 | NA | NA | NA | NA | NA |
J080 | chr3 | 33297962 | 33373091 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.109 | 0.4009 | NA | NA | NA | NA | NA |
J081 | chr3 | 33300571 | 33358966 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J082 | chr3 | 33303160 | 33364624 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J083 | chr3 | 33317613 | 33358966 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J084 | chr3 | 33359021 | 33359282 | TRUE | OK | 70.6 | 0.0029 | 0.1249 | 0.72 | 0.269 | 0.134 | 53.6 | 87.8 |
J085 | chr3 | 33359357 | 33364624 | TRUE | OK | 61.4 | 0.00322 | 0.3346 | 0.8024 | 0.178 | 0.089 | 48.2 | 74.8 |
J086 | chr3 | 33364719 | 33373091 | TRUE | OK | 84.7 | 0.00435 | 0.8096 | 0.9525 | -0.050 | -0.025 | 72.4 | 97.3 |
J087 | chr3 | 33372675 | 33373091 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.404 | 0.5089 | NA | NA | NA | NA | NA |
J088 | chr3 | 33373160 | 33373240 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.123 | 0.6891 | NA | NA | NA | NA | NA |
J089 | chr3 | 33373160 | 33373259 | TRUE | OK | 70.4 | 0.00488 | 0.6208 | 0.8948 | -0.102 | -0.051 | 61.3 | 79.7 |
J090 | chr3 | 33373302 | 33373870 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | NA | NA |
J091 | chr3 | 33373355 | 33373577 | TRUE | OK | 64.4 | 0.0208 | 0.8191 | 0.955 | -0.103 | -0.051 | 56.1 | 72.8 |
J092 | chr3 | 33373704 | 33373846 | TRUE | OK | 59.2 | 0.00434 | 0.1589 | 0.7384 | 0.272 | 0.136 | 44.8 | 73.8 |
J093 | chr3 | 33373704 | 33373850 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.104 | 0.6957 | NA | NA | NA | NA | NA |
J094 | chr3 | 33373921 | 33375287 | TRUE | OK | 55.8 | 0.00295 | 0.8245 | 0.9564 | 0.040 | 0.020 | 46.2 | 65.6 |
J095 | chr3 | 33375418 | 33377272 | TRUE | OK | 51.3 | 0.00515 | 0.0714 | 0.665 | 0.381 | 0.190 | 37.1 | 65.6 |
J096 | chr3 | 33377333 | 33378102 | TRUE | OK | 63.3 | 0.00352 | 0.01542 | 0.4517 | 0.456 | 0.228 | 44.5 | 82.3 |
J097 | chr3 | 33378147 | 33378684 | TRUE | OK | 69.2 | 0.00241 | 0.1092 | 0.7072 | 0.278 | 0.139 | 52.3 | 86.2 |
J098 | chr3 | 33378741 | 33383988 | TRUE | OK | 57.0 | 0.00321 | 0.379 | 0.8165 | 0.169 | 0.085 | 44.8 | 69.2 |
J099 | chr3 | 33378834 | 33383988 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.118 | 0.2738 | NA | NA | NA | NA | NA |
J100 | chr3 | 33384201 | 33385500 | TRUE | OK | 46.3 | 0.0047 | 0.1478 | 0.7339 | 0.315 | 0.157 | 34.4 | 58.4 |
J101 | chr3 | 33385728 | 33403233 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.256 | 0.6908 | NA | NA | NA | NA | NA |
N102 | chr3 | 33390368 | 33392562 | TRUE | OK | 329.9 | 0.04 | 2.224e-05 | 0.01035 | -1.486 | -0.742 | 365.1 | 294.8 |
N103 | chr3 | 33392614 | 33393311 | TRUE | OK | 339.4 | 0.0577 | 0.0003278 | 0.06822 | -1.498 | -0.748 | 373.9 | 305.0 |
N104 | chr3 | 33393454 | 33396161 | TRUE | OK | 550.7 | 1.38 | 0.06802 | 0.6596 | -2.289 | -1.134 | 558.6 | 542.7 |
N105 | chr3 | 33396280 | 33396744 | TRUE | OK | 18.2 | 0.00685 | 0.7727 | 0.9421 | -0.095 | -0.048 | 15.8 | 20.6 |
N106 | chr3 | 33396280 | 33397044 | TRUE | OK | 564.4 | 1.92 | 0.02014 | 0.4931 | -2.837 | -1.402 | 589.5 | 539.3 |
N107 | chr3 | 33396878 | 33397044 | TRUE | OK | 17.6 | 0.0573 | 0.9772 | 0.9945 | -0.046 | -0.023 | 15.1 | 20.3 |
N108 | chr3 | 33397135 | 33400188 | TRUE | OK | 513.7 | 0.517 | 0.0999 | 0.6979 | -1.474 | -0.733 | 499.5 | 527.8 |
N109 | chr3 | 33400282 | 33400961 | TRUE | OK | 553.9 | 2.22 | 0.04342 | 0.6053 | -1.346 | -0.668 | 526.3 | 581.4 |
N110 | chr3 | 33401016 | 33402800 | TRUE | OK | 531.3 | 1.54 | 0.1586 | 0.7383 | -1.522 | -0.756 | 513.3 | 549.3 |
N111 | chr3 | 33402904 | 33408689 | TRUE | OK | 286.3 | 0.033 | 0.001898 | 0.1851 | -1.004 | -0.501 | 298.7 | 274.1 |
N112 | chr3 | 33402904 | 33409235 | TRUE | OK | 419.4 | 0.125 | 0.001514 | 0.1652 | -1.822 | -0.908 | 454.0 | 384.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000153558.15 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |