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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr10 | 15097179 | 15097214 | TRUE | OK | 43.5 | 0.0113 | 0.6871 | 0.9158 | 0.104 | 0.052 | 52.3 | 40.7 | 57.4 | 35.7 | 37.2 | 37.7 |
E002 | chr10 | 15097214 | 15097236 | TRUE | OK | 51.8 | 0.00756 | 0.6849 | 0.9151 | 0.094 | 0.047 | 64.1 | 51.1 | 64.5 | 45.7 | 42.1 | 43.5 |
E003 | chr10 | 15097236 | 15097330 | TRUE | OK | 96.3 | 0.00712 | 0.9632 | 0.9915 | 0.013 | 0.006 | 118.3 | 101.1 | 121.9 | 83.4 | 77.4 | 75.4 |
E004 | chr10 | 15097330 | 15097354 | TRUE | OK | 92.6 | 0.00891 | 0.9984 | 0.9995 | 0.003 | 0.001 | 108.5 | 97.0 | 123.9 | 80.4 | 75.4 | 70.6 |
E005 | chr10 | 15097354 | 15097398 | TRUE | OK | 186.5 | 0.00789 | 0.7474 | 0.9345 | 0.063 | 0.032 | 225.8 | 200.2 | 227.6 | 169.8 | 139.1 | 156.6 |
E006 | chr10 | 15097398 | 15097409 | TRUE | OK | 176.9 | 0.00863 | 0.9437 | 0.9867 | 0.020 | 0.010 | 213.0 | 195.0 | 218.6 | 156.9 | 124.4 | 153.7 |
E007 | chr10 | 15097409 | 15097419 | TRUE | OK | 68.4 | 0.00521 | 0.3977 | 0.8232 | -0.159 | -0.079 | 90.7 | 78.2 | 84.6 | 55.6 | 48.0 | 53.2 |
E008 | chr10 | 15097419 | 15097766 | TRUE | OK | 191.5 | 0.00648 | 0.645 | 0.9027 | -0.071 | -0.036 | 258.3 | 223.1 | 211.5 | 171.8 | 144.9 | 139.2 |
E009 | chr10 | 15102217 | 15102336 | TRUE | OK | 160.5 | 0.0158 | 0.214 | 0.7629 | 0.291 | 0.146 | 213.0 | 150.2 | 166.2 | 169.8 | 136.1 | 127.6 |
E010 | chr10 | 15103304 | 15103713 | TRUE | OK | 753.7 | 0.00745 | 0.9505 | 0.9885 | 0.023 | 0.011 | 914.0 | 912.4 | 849.1 | 673.1 | 614.0 | 559.8 |
E011 | chr10 | 15103713 | 15103820 | TRUE | OK | 440.9 | 0.00382 | 0.1903 | 0.754 | -0.164 | -0.082 | 484.1 | 593.3 | 539.9 | 353.4 | 349.6 | 324.9 |
E012 | chr10 | 15103820 | 15104251 | TRUE | OK | 479.1 | 0.01 | 0.7255 | 0.9279 | -0.082 | -0.041 | 501.9 | 713.2 | 515.7 | 380.2 | 371.1 | 392.5 |
E013 | chr10 | 15104251 | 15104254 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.3 | 0.0423 | 0.07702 | NA | NA | NA | 5.9 | 1.0 | 3.0 | 6.9 | 4.9 | 3.9 |
E014 | chr10 | 15104254 | 15104255 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0559 | 0.02051 | NA | NA | NA | 3.9 | 1.0 | 0.0 | 4.0 | 4.9 | 3.9 |
E015 | chr10 | 15104255 | 15104257 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0559 | 0.02051 | NA | NA | NA | 3.9 | 1.0 | 0.0 | 4.0 | 4.9 | 3.9 |
E016 | chr10 | 15104436 | 15104455 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.9 | 0.0258 | 0.004181 | NA | NA | NA | 5.9 | 4.2 | 9.1 | 7.9 | 12.7 | 13.5 |
E017 | chr10 | 15106039 | 15106130 | TRUE | OK | 29.0 | 0.00794 | 0.06707 | 0.6582 | 0.494 | 0.247 | 32.5 | 29.2 | 27.2 | 35.7 | 21.5 | 28.0 |
E018 | chr10 | 15111685 | 15111786 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.107 | 0.4345 | NA | NA | NA | 5.9 | 3.1 | 1.0 | 1.0 | 4.9 | 4.8 |
E019 | chr10 | 15139758 | 15139818 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.854 | 0.75 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J020 | chr10 | 15097398 | 15111685 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.551 | 0.7185 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J021 | chr10 | 15097409 | 15102217 | TRUE | OK | 48.7 | 0.0131 | 0.1515 | 0.7354 | 0.377 | 0.189 | 58.2 | 42.8 | 54.4 | 52.6 | 35.3 | 49.3 |
J022 | chr10 | 15097409 | 15103304 | TRUE | OK | 59.1 | 0.0037 | 0.9445 | 0.9868 | 0.014 | 0.007 | 62.1 | 73.0 | 74.5 | 46.7 | 45.0 | 53.2 |
J023 | chr10 | 15097766 | 15102217 | TRUE | OK | 37.9 | 0.0278 | 0.4663 | 0.8448 | 0.284 | 0.142 | 49.3 | 34.4 | 40.3 | 50.6 | 28.4 | 24.2 |
J024 | chr10 | 15097766 | 15103304 | TRUE | OK | 31.9 | 0.00588 | 0.9637 | 0.9916 | 0.014 | 0.007 | 44.4 | 34.4 | 34.2 | 28.8 | 28.4 | 21.3 |
J025 | chr10 | 15102336 | 15103304 | TRUE | OK | 97.8 | 0.0114 | 0.381 | 0.8173 | 0.186 | 0.093 | 136.1 | 100.1 | 94.7 | 89.4 | 89.1 | 77.3 |
J026 | chr10 | 15103713 | 15104436 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.032 | 0.04803 | NA | NA | NA | 3.0 | 1.0 | 2.0 | 3.0 | 3.9 | 4.8 |
J027 | chr10 | 15104455 | 15106039 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J028 | chr10 | 15111786 | 15139758 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N029 | chr10 | 15106698 | 15109701 | TRUE | OK | 39.9 | 0.00451 | 0.001785 | 0.1797 | 0.688 | 0.344 | 34.5 | 48.0 | 32.2 | 50.6 | 35.3 | 38.7 |
N030 | chr10 | 15109215 | 15109701 | TRUE | OK | 104.8 | 0.00338 | 0.01136 | 0.4091 | 0.388 | 0.194 | 121.3 | 125.1 | 88.6 | 99.3 | 95.0 | 99.6 |
N031 | chr10 | 15109839 | 15112795 | TRUE | OK | 135.0 | 0.00703 | 0.00224 | 0.203 | 0.543 | 0.271 | 152.8 | 133.5 | 126.9 | 141.0 | 112.6 | 143.1 |
N032 | chr10 | 15112963 | 15119342 | TRUE | OK | 161.1 | 0.00243 | 2.594e-09 | 4.969e-06 | 0.768 | 0.384 | 162.7 | 160.6 | 139.0 | 172.7 | 155.7 | 176.0 |
N033 | chr10 | 15119513 | 15128349 | TRUE | OK | 120.2 | 0.011 | 6.143e-06 | 0.003689 | 0.936 | 0.468 | 133.1 | 99.1 | 90.7 | 130.1 | 136.1 | 132.5 |
N034 | chr10 | 15128458 | 15130141 | TRUE | OK | 151.5 | 0.00822 | 0.001075 | 0.1375 | 0.597 | 0.298 | 174.5 | 138.7 | 144.0 | 147.9 | 159.6 | 144.1 |
N035 | chr10 | 15128458 | 15132816 | TRUE | OK | 12.1 | 0.0455 | 0.4805 | 0.8496 | 0.308 | 0.154 | 21.7 | 8.3 | 9.1 | 11.9 | 9.8 | 11.6 |
N036 | chr10 | 15130312 | 15132816 | TRUE | OK | 116.2 | 0.00267 | 8.46e-05 | 0.02767 | 0.567 | 0.283 | 118.3 | 122.0 | 111.8 | 122.1 | 125.3 | 97.7 |
N037 | chr10 | 15132933 | 15133052 | TRUE | OK | 132.3 | 0.00174 | 0.007461 | 0.3502 | 0.345 | 0.172 | 144.9 | 158.5 | 125.9 | 125.1 | 125.3 | 114.1 |
N038 | chr10 | 15133144 | 15133244 | TRUE | OK | 182.3 | 0.00166 | 1.377e-07 | 0.0001597 | 0.612 | 0.306 | 184.4 | 202.3 | 164.2 | 181.7 | 189.0 | 172.1 |
N039 | chr10 | 15133363 | 15135273 | TRUE | OK | 204.9 | 0.0061 | 1.004e-10 | 2.764e-07 | 1.027 | 0.513 | 168.6 | 201.2 | 178.3 | 230.3 | 198.8 | 252.3 |
N040 | chr10 | 15135418 | 15140986 | TRUE | OK | 31.6 | 0.0114 | 0.06452 | 0.6544 | 0.509 | 0.254 | 26.6 | 40.7 | 29.2 | 24.8 | 29.4 | 38.7 |
N041 | chr10 | 15135418 | 15141421 | TRUE | OK | 170.0 | 0.00577 | 3.371e-11 | 1.084e-07 | 1.061 | 0.530 | 142.0 | 160.6 | 142.0 | 182.7 | 177.2 | 215.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000152464.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |