<< | < Prev Gene | TOP | Next Gene > | >> |
binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 9206764 | 9206811 | TRUE | OK | 10.5 | 0.226 | 0.005368 | 0.3047 | -2.184 | -1.092 | 21.7 | 13.6 | 16.1 | 10.9 | 1.0 | 0.0 |
E002 | chr2 | 9206811 | 9207230 | TRUE | OK | 306.7 | 0.0147 | 0.4255 | 0.8315 | -0.206 | -0.103 | 410.2 | 193.9 | 358.6 | 353.4 | 285.0 | 238.8 |
E003 | chr2 | 9279316 | 9279389 | TRUE | OK | 322.0 | 0.0121 | 0.08947 | 0.6887 | 0.285 | 0.143 | 368.8 | 167.9 | 317.3 | 399.1 | 315.3 | 363.5 |
E004 | chr2 | 9297299 | 9297445 | TRUE | OK | 466.3 | 0.00182 | 0.01676 | 0.4659 | 0.207 | 0.103 | 492.0 | 309.7 | 472.4 | 545.0 | 468.1 | 510.5 |
E005 | chr2 | 9318523 | 9318598 | TRUE | OK | 405.4 | 0.00145 | 0.2067 | 0.7603 | 0.110 | 0.055 | 418.1 | 305.5 | 422.0 | 485.5 | 377.0 | 424.4 |
E006 | chr2 | 9320287 | 9320337 | TRUE | OK | 423.0 | 0.00193 | 0.3762 | 0.8155 | 0.079 | 0.039 | 456.5 | 303.4 | 448.2 | 502.4 | 383.9 | 443.8 |
E007 | chr2 | 9323120 | 9323250 | TRUE | OK | 594.4 | 0.00492 | 0.4673 | 0.8451 | 0.079 | 0.039 | 644.8 | 392.1 | 662.8 | 726.7 | 540.6 | 599.4 |
E008 | chr2 | 9327825 | 9327911 | TRUE | OK | 537.8 | 0.00663 | 0.2709 | 0.7825 | 0.144 | 0.072 | 572.9 | 336.8 | 594.3 | 682.0 | 493.6 | 547.2 |
E009 | chr2 | 9334737 | 9334813 | TRUE | OK | 552.1 | 0.00855 | 0.3555 | 0.8092 | 0.120 | 0.060 | 598.5 | 330.5 | 627.5 | 680.1 | 516.1 | 559.8 |
E010 | chr2 | 9335092 | 9335179 | TRUE | OK | 597.0 | 0.00741 | 0.2907 | 0.7888 | 0.131 | 0.066 | 657.7 | 360.8 | 658.7 | 721.8 | 561.1 | 621.7 |
E011 | chr2 | 9336035 | 9336044 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.185 | 0.9638 | NA | NA | NA | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 |
E012 | chr2 | 9344531 | 9344635 | TRUE | OK | 625.5 | 0.0039 | 0.6414 | 0.9016 | 0.037 | 0.019 | 690.2 | 420.2 | 703.0 | 725.7 | 573.9 | 640.0 |
E013 | chr2 | 9344730 | 9344800 | TRUE | OK | 549.5 | 0.0068 | 0.738 | 0.9321 | 0.027 | 0.014 | 630.1 | 357.7 | 610.4 | 620.5 | 479.8 | 598.5 |
E014 | chr2 | 9350458 | 9350807 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.3 | 0.0277 | 0.1359 | NA | NA | NA | 4.9 | 4.2 | 4.0 | 6.0 | 6.9 | 11.6 |
E015 | chr2 | 9350807 | 9350895 | TRUE | OK | 589.5 | 0.00982 | 0.6927 | 0.9175 | 0.041 | 0.021 | 683.3 | 368.1 | 655.7 | 675.1 | 502.4 | 652.6 |
E016 | chr2 | 9356046 | 9356095 | TRUE | OK | 423.9 | 0.0143 | 0.3913 | 0.8209 | 0.126 | 0.063 | 496.9 | 231.5 | 463.3 | 476.5 | 390.7 | 484.4 |
E017 | chr2 | 9356178 | 9356303 | TRUE | OK | 577.9 | 0.00478 | 0.3656 | 0.8122 | 0.099 | 0.050 | 630.1 | 381.6 | 629.5 | 673.1 | 520.0 | 633.3 |
E018 | chr2 | 9356303 | 9356345 | TRUE | OK | 397.9 | 0.00421 | 0.4422 | 0.837 | 0.080 | 0.040 | 391.4 | 276.3 | 468.4 | 440.8 | 385.8 | 424.4 |
E019 | chr2 | 9358755 | 9358838 | TRUE | OK | 458.8 | 0.0033 | 0.2742 | 0.7831 | 0.114 | 0.057 | 455.5 | 329.5 | 510.7 | 503.3 | 438.7 | 515.3 |
E020 | chr2 | 9358838 | 9358889 | TRUE | OK | 397.2 | 0.00234 | 0.8997 | 0.976 | -0.016 | -0.008 | 426.9 | 303.4 | 441.2 | 438.8 | 346.7 | 426.4 |
E021 | chr2 | 9368424 | 9368519 | TRUE | OK | 468.1 | 0.0017 | 0.08906 | 0.6883 | 0.142 | 0.071 | 507.8 | 321.2 | 479.4 | 544.0 | 457.3 | 498.9 |
E022 | chr2 | 9374754 | 9374944 | TRUE | OK | 654.0 | 0.00389 | 0.09359 | 0.6921 | 0.177 | 0.088 | 726.7 | 434.8 | 648.7 | 742.6 | 634.6 | 736.7 |
E023 | chr2 | 9376907 | 9376993 | TRUE | OK | 473.2 | 0.00243 | 0.01801 | 0.4759 | 0.227 | 0.113 | 499.9 | 314.9 | 469.4 | 562.9 | 456.3 | 535.6 |
E024 | chr2 | 9378943 | 9379059 | TRUE | OK | 538.0 | 0.00281 | 0.05277 | 0.6325 | 0.190 | 0.095 | 586.7 | 356.6 | 536.8 | 665.2 | 518.0 | 564.6 |
E025 | chr2 | 9380740 | 9380808 | TRUE | OK | 448.8 | 0.00177 | 0.2827 | 0.7858 | 0.093 | 0.047 | 491.0 | 323.2 | 461.3 | 538.1 | 415.2 | 464.1 |
E026 | chr2 | 9385244 | 9385358 | TRUE | OK | 487.1 | 0.00126 | 0.3228 | 0.7987 | 0.082 | 0.041 | 503.9 | 390.0 | 496.6 | 569.9 | 461.2 | 500.8 |
E027 | chr2 | 9388293 | 9388546 | TRUE | OK | 430.1 | 0.00133 | 0.2165 | 0.7636 | 0.105 | 0.052 | 431.9 | 333.7 | 452.2 | 511.3 | 421.1 | 430.2 |
E028 | chr2 | 9391061 | 9391196 | TRUE | OK | 116.4 | 0.00365 | 0.0002673 | 0.06035 | 0.539 | 0.270 | 108.5 | 68.8 | 100.7 | 143.0 | 148.9 | 128.6 |
E029 | chr2 | 9393481 | 9393647 | TRUE | OK | 357.5 | 0.00276 | 0.4362 | 0.8349 | 0.069 | 0.035 | 395.4 | 243.0 | 385.8 | 390.2 | 372.1 | 358.7 |
E030 | chr2 | 9398840 | 9400022 | TRUE | OK | 24.6 | 0.0395 | 0.6405 | 0.9013 | 0.187 | 0.093 | 25.6 | 13.6 | 28.2 | 15.9 | 36.2 | 28.0 |
E031 | chr2 | 9400022 | 9400072 | TRUE | OK | 316.7 | 0.00272 | 0.4046 | 0.8254 | 0.085 | 0.043 | 332.3 | 228.4 | 341.4 | 362.4 | 339.8 | 295.9 |
E032 | chr2 | 9400741 | 9400769 | TRUE | OK | 277.0 | 0.00288 | 0.9658 | 0.992 | -0.009 | -0.004 | 289.9 | 214.8 | 310.2 | 306.8 | 290.8 | 249.4 |
E033 | chr2 | 9400769 | 9400830 | TRUE | OK | 346.2 | 0.00208 | 0.8343 | 0.9591 | 0.017 | 0.009 | 352.0 | 268.0 | 389.8 | 388.2 | 351.6 | 327.8 |
E034 | chr2 | 9401273 | 9401396 | TRUE | OK | 501.4 | 0.00124 | 0.09328 | 0.6919 | 0.132 | 0.066 | 499.9 | 379.5 | 527.8 | 569.9 | 497.5 | 533.7 |
E035 | chr2 | 9403252 | 9405677 | TRUE | OK | 3000.2 | 0.00877 | 0.1631 | 0.7408 | -0.195 | -0.098 | 3279.5 | 2782.0 | 3104.3 | 3165.0 | 2756.7 | 2914.0 |
E036 | chr2 | 9405677 | 9405678 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.5 | 0.0843 | 0.8154 | NA | NA | NA | 5.9 | 16.7 | 7.1 | 8.9 | 6.9 | 11.6 |
E037 | chr2 | 9405678 | 9405683 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.026 | 0.5224 | NA | NA | NA | 5.9 | 4.2 | 8.1 | 6.0 | 2.9 | 5.8 |
J038 | chr2 | 9207230 | 9279316 | TRUE | OK | 138.9 | 0.0187 | 0.08625 | 0.6849 | 0.364 | 0.182 | 158.7 | 60.5 | 137.0 | 169.8 | 141.0 | 166.3 |
J039 | chr2 | 9279389 | 9297299 | TRUE | OK | 257.1 | 0.00873 | 0.03991 | 0.5934 | 0.319 | 0.159 | 284.0 | 135.6 | 252.8 | 320.7 | 260.5 | 289.1 |
J040 | chr2 | 9297445 | 9318523 | TRUE | OK | 255.2 | 0.00168 | 0.1716 | 0.7448 | 0.139 | 0.069 | 256.4 | 198.1 | 258.9 | 291.9 | 236.0 | 290.1 |
J041 | chr2 | 9318598 | 9320287 | TRUE | OK | 294.3 | 0.00109 | 0.5164 | 0.8612 | 0.053 | 0.026 | 320.5 | 213.8 | 313.2 | 339.5 | 272.2 | 306.5 |
J042 | chr2 | 9320337 | 9323120 | TRUE | OK | 347.5 | 0.00154 | 0.2393 | 0.7719 | 0.101 | 0.051 | 374.7 | 237.7 | 371.7 | 419.9 | 327.1 | 353.9 |
J043 | chr2 | 9323250 | 9327825 | TRUE | OK | 369.2 | 0.00539 | 0.2687 | 0.7819 | 0.141 | 0.070 | 390.5 | 235.7 | 405.9 | 463.6 | 328.1 | 391.6 |
J044 | chr2 | 9327911 | 9334737 | TRUE | OK | 386.7 | 0.00895 | 0.3565 | 0.8096 | 0.132 | 0.066 | 421.0 | 229.4 | 434.1 | 496.4 | 355.5 | 383.8 |
J045 | chr2 | 9334813 | 9335092 | TRUE | OK | 408.2 | 0.00819 | 0.3422 | 0.8047 | 0.125 | 0.062 | 441.7 | 243.0 | 463.3 | 488.5 | 371.1 | 441.8 |
J046 | chr2 | 9335179 | 9336035 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.176 | 0.6274 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
J047 | chr2 | 9335179 | 9344531 | TRUE | OK | 404.2 | 0.00308 | 0.1997 | 0.7577 | 0.124 | 0.062 | 432.9 | 258.6 | 445.2 | 468.6 | 395.6 | 424.4 |
J048 | chr2 | 9336044 | 9344531 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.267 | 0.9785 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
J049 | chr2 | 9344635 | 9344730 | TRUE | OK | 395.3 | 0.00371 | 0.7197 | 0.926 | 0.028 | 0.014 | 445.7 | 263.8 | 439.1 | 462.6 | 352.5 | 408.0 |
J050 | chr2 | 9344800 | 9350807 | TRUE | OK | 438.2 | 0.00697 | 0.8764 | 0.9701 | 0.006 | 0.003 | 496.0 | 289.9 | 497.6 | 490.4 | 370.2 | 485.4 |
J051 | chr2 | 9350895 | 9356046 | TRUE | OK | 327.2 | 0.0207 | 0.5936 | 0.8859 | 0.075 | 0.038 | 409.2 | 173.1 | 353.5 | 368.3 | 276.2 | 382.9 |
J052 | chr2 | 9356095 | 9356178 | TRUE | OK | 351.3 | 0.0117 | 0.2076 | 0.7605 | 0.199 | 0.099 | 397.4 | 192.9 | 371.7 | 399.1 | 333.9 | 412.8 |
J053 | chr2 | 9356345 | 9358755 | TRUE | OK | 325.7 | 0.00344 | 0.5177 | 0.8616 | 0.070 | 0.035 | 312.6 | 240.9 | 379.7 | 361.4 | 305.5 | 353.9 |
J054 | chr2 | 9358889 | 9368424 | TRUE | OK | 319.8 | 0.00142 | 0.3065 | 0.7934 | 0.088 | 0.044 | 339.2 | 231.5 | 339.4 | 354.4 | 300.6 | 353.9 |
J055 | chr2 | 9368519 | 9374754 | TRUE | OK | 316.5 | 0.00586 | 0.1294 | 0.7229 | 0.192 | 0.096 | 372.7 | 193.9 | 301.2 | 373.3 | 326.1 | 331.6 |
J056 | chr2 | 9374944 | 9376907 | TRUE | OK | 350.5 | 0.00372 | 0.1706 | 0.7443 | 0.157 | 0.079 | 380.6 | 237.7 | 355.5 | 405.1 | 317.3 | 407.0 |
J057 | chr2 | 9376993 | 9378943 | TRUE | OK | 305.4 | 0.00151 | 1.118e-05 | 0.006045 | 0.409 | 0.204 | 305.7 | 183.5 | 283.0 | 394.1 | 319.2 | 347.1 |
J058 | chr2 | 9379059 | 9380740 | TRUE | OK | 336.9 | 0.00299 | 0.4756 | 0.8481 | 0.076 | 0.038 | 377.6 | 235.7 | 349.5 | 417.0 | 297.7 | 344.2 |
J059 | chr2 | 9380808 | 9385244 | TRUE | OK | 348.0 | 0.00106 | 0.3351 | 0.8025 | 0.080 | 0.040 | 370.7 | 269.0 | 353.5 | 398.1 | 322.2 | 374.2 |
J060 | chr2 | 9385358 | 9388293 | TRUE | OK | 234.9 | 0.00166 | 0.2532 | 0.7765 | 0.122 | 0.061 | 234.7 | 196.0 | 229.6 | 286.9 | 230.1 | 232.0 |
J061 | chr2 | 9388546 | 9391061 | TRUE | OK | 61.0 | 0.00301 | 0.01898 | 0.4833 | 0.410 | 0.205 | 58.2 | 39.6 | 55.4 | 68.5 | 74.4 | 69.6 |
J062 | chr2 | 9388546 | 9393481 | TRUE | OK | 74.6 | 0.00243 | 0.07749 | 0.6744 | -0.289 | -0.145 | 86.8 | 59.4 | 94.7 | 71.5 | 62.7 | 72.5 |
J063 | chr2 | 9391196 | 9393481 | TRUE | OK | 62.0 | 0.00442 | 0.0003999 | 0.07764 | 0.653 | 0.326 | 60.1 | 28.2 | 52.4 | 75.5 | 79.3 | 76.4 |
J064 | chr2 | 9393647 | 9400022 | TRUE | OK | 226.3 | 0.00231 | 0.3929 | 0.8215 | 0.084 | 0.042 | 252.4 | 150.2 | 241.7 | 257.1 | 238.0 | 218.5 |
J065 | chr2 | 9400072 | 9400741 | TRUE | OK | 240.4 | 0.00238 | 0.6389 | 0.9007 | 0.047 | 0.024 | 247.5 | 182.5 | 263.9 | 261.1 | 261.5 | 226.2 |
J066 | chr2 | 9400830 | 9401273 | TRUE | OK | 285.7 | 0.00177 | 0.4225 | 0.8306 | 0.077 | 0.038 | 278.1 | 217.9 | 320.3 | 327.6 | 292.8 | 277.5 |
J067 | chr2 | 9401396 | 9403252 | TRUE | OK | 315.0 | 0.00127 | 0.2862 | 0.7871 | 0.094 | 0.047 | 323.4 | 246.1 | 325.3 | 345.5 | 302.6 | 347.1 |
N068 | chr2 | 9234444 | 9237832 | TRUE | OK | 12.2 | 0.0111 | 0.5753 | 0.88 | 0.207 | 0.103 | 14.8 | 7.3 | 11.1 | 13.9 | 8.8 | 17.4 |
N069 | chr2 | 9234444 | 9279316 | TRUE | OK | 28.5 | 0.024 | 0.7166 | 0.9249 | 0.162 | 0.081 | 21.7 | 27.1 | 30.2 | 42.7 | 18.6 | 30.9 |
N070 | chr2 | 9237945 | 9279316 | TRUE | OK | 14.7 | 0.0429 | 0.4547 | 0.8409 | 0.325 | 0.163 | 20.7 | 6.3 | 11.1 | 23.8 | 16.6 | 9.7 |
N071 | chr2 | 9297445 | 9320287 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.058 | 0.9035 | NA | NA | NA | 7.9 | 7.3 | 10.1 | 15.9 | 7.8 | 2.9 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000151693.11 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |