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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr2 | 189674289 | 189674606 | TRUE | OK | 16.0 | 0.017 | 0.9539 | 0.9894 | 0.028 | 0.014 | 18.7 | 10.4 | 14.1 | 16.9 | 19.6 | 16.4 |
| E002 | chr2 | 189674606 | 189674830 | TRUE | OK | 22.3 | 0.0122 | 0.9631 | 0.9914 | 0.021 | 0.011 | 25.6 | 17.7 | 17.1 | 25.8 | 23.5 | 24.2 |
| E003 | chr2 | 189675984 | 189676037 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.9 | 0.0622 | 0.005839 | NA | NA | NA | 3.9 | 9.4 | 5.0 | 4.0 | 0.0 | 1.0 |
| E004 | chr2 | 189676426 | 189676455 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.851 | 0.6882 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| E005 | chr2 | 189676455 | 189676937 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.221 | 0.8422 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 2.0 | 0.0 | 1.0 |
| E006 | chr2 | 189676937 | 189677091 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.411 | 0.9593 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 2.0 | 0.0 | 1.0 |
| E007 | chr2 | 189689526 | 189689964 | TRUE | OK | 26.3 | 0.0327 | 0.6823 | 0.9144 | -0.159 | -0.080 | 25.6 | 16.7 | 33.2 | 25.8 | 23.5 | 32.9 |
| E008 | chr2 | 189692254 | 189692418 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.397 | 0.3283 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
| E009 | chr2 | 189692418 | 189692849 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.241 | 0.8885 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 |
| E010 | chr2 | 189693073 | 189693177 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.252 | 0.4936 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| E011 | chr2 | 189694980 | 189695161 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.389 | 0.429 | NA | NA | NA | 0.0 | 1.0 | 6.0 | 1.0 | 0.0 | 1.9 |
| E012 | chr2 | 189696149 | 189696200 | TRUE | OK | 11.6 | 0.0958 | 0.9048 | 0.9773 | -0.145 | -0.073 | 7.9 | 5.2 | 20.1 | 11.9 | 7.8 | 16.4 |
| E013 | chr2 | 189696200 | 189696300 | TRUE | OK | 16.2 | 0.0565 | 0.9928 | 0.9981 | -0.009 | -0.005 | 11.8 | 9.4 | 23.2 | 13.9 | 14.7 | 24.2 |
| E014 | chr2 | 189696300 | 189696369 | TRUE | OK | 14.5 | 0.0113 | 0.04089 | 0.5967 | 0.773 | 0.386 | 9.9 | 9.4 | 10.1 | 17.9 | 18.6 | 21.3 |
| E015 | chr2 | 189705022 | 189705224 | TRUE | OK | 12.4 | 0.0128 | 0.5845 | 0.8828 | 0.212 | 0.106 | 7.9 | 14.6 | 9.1 | 14.9 | 14.7 | 13.5 |
| E016 | chr2 | 189706937 | 189707146 | TRUE | OK | 15.8 | 0.014 | 0.9087 | 0.9783 | 0.031 | 0.015 | 8.9 | 20.9 | 13.1 | 14.9 | 18.6 | 18.4 |
| E017 | chr2 | 189711048 | 189711153 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.0854 | 0.5589 | NA | NA | NA | 1.0 | 2.1 | 3.0 | 3.0 | 0.0 | 1.9 |
| E018 | chr2 | 189719571 | 189719813 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.5 | 0.0868 | 0.8667 | NA | NA | NA | 5.9 | 5.2 | 4.0 | 9.9 | 1.0 | 6.8 |
| E019 | chr2 | 189720618 | 189720684 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.0355 | 0.2422 | NA | NA | NA | 6.9 | 5.2 | 4.0 | 4.0 | 2.0 | 5.8 |
| E020 | chr2 | 189720684 | 189720787 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0463 | 0.8072 | NA | NA | NA | 7.9 | 3.1 | 5.0 | 7.9 | 2.9 | 6.8 |
| E021 | chr2 | 189727822 | 189727855 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.152 | 0.5922 | NA | NA | NA | 1.0 | 3.1 | 0.0 | 2.0 | 1.0 | 0.0 |
| E022 | chr2 | 189727855 | 189728097 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0254 | 0.9928 | NA | NA | NA | 5.9 | 12.5 | 7.1 | 14.9 | 6.9 | 8.7 |
| E023 | chr2 | 189728266 | 189728352 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.0291 | 0.3267 | NA | NA | NA | 3.9 | 7.3 | 3.0 | 5.0 | 9.8 | 9.7 |
| E024 | chr2 | 189728352 | 189728420 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0272 | 0.02137 | NA | NA | NA | 3.0 | 3.1 | 2.0 | 6.9 | 10.8 | 7.7 |
| E025 | chr2 | 189728659 | 189728821 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.145 | 0.1104 | NA | NA | NA | 5.9 | 1.0 | 0.0 | 7.9 | 6.9 | 5.8 |
| E026 | chr2 | 189730494 | 189730601 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.121 | 0.2264 | NA | NA | NA | 2.0 | 0.0 | 0.0 | 4.0 | 1.0 | 1.9 |
| E027 | chr2 | 189733106 | 189733229 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.121 | 0.5176 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 2.0 | 2.0 | 1.9 |
| E028 | chr2 | 189737682 | 189737841 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.0702 | 0.05905 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 2.0 | 6.9 | 3.9 |
| E029 | chr2 | 189738558 | 189738564 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E030 | chr2 | 189738564 | 189738682 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.0352 | 0.4267 | NA | NA | NA | 2.0 | 2.1 | 5.0 | 5.0 | 5.9 | 4.8 |
| E031 | chr2 | 189741341 | 189741451 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.6 | 0.129 | 0.8341 | NA | NA | NA | 3.0 | 1.0 | 10.1 | 4.0 | 4.9 | 4.8 |
| E032 | chr2 | 189743274 | 189743474 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E033 | chr2 | 189744741 | 189744788 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.163 | 0.2041 | NA | NA | NA | 2.0 | 1.0 | 8.1 | 2.0 | 1.0 | 1.9 |
| E034 | chr2 | 189746379 | 189746644 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0362 | 0.6403 | NA | NA | NA | 3.9 | 5.2 | 3.0 | 5.0 | 2.0 | 4.8 |
| E035 | chr2 | 189746644 | 189746649 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.093 | 0.2081 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 3.0 | 1.0 | 2.9 |
| E036 | chr2 | 189746649 | 189746650 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.093 | 0.2081 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 3.0 | 1.0 | 2.9 |
| E037 | chr2 | 189752934 | 189753140 | TRUE | OK | 93.6 | 0.0108 | 0.9133 | 0.9796 | -0.037 | -0.018 | 73.0 | 110.5 | 74.5 | 108.2 | 102.8 | 92.8 |
| E038 | chr2 | 189761097 | 189761193 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.152 | 0.7706 | NA | NA | NA | 4.9 | 0.0 | 4.0 | 2.0 | 4.9 | 1.9 |
| J039 | chr2 | 189674830 | 189689526 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.1 | 0.116 | 0.8954 | NA | NA | NA | 11.8 | 2.1 | 5.0 | 10.9 | 4.9 | 7.7 |
| J040 | chr2 | 189676037 | 189676455 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J041 | chr2 | 189677091 | 189689526 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.557 | 0.656 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
| J042 | chr2 | 189689964 | 189692254 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J043 | chr2 | 189689964 | 189696149 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.117 | 0.5017 | NA | NA | NA | 3.9 | 4.2 | 13.1 | 5.0 | 2.9 | 9.7 |
| J044 | chr2 | 189692418 | 189693073 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J045 | chr2 | 189693177 | 189694980 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.54 | 0.4771 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J046 | chr2 | 189695161 | 189696149 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.604 | 0.5003 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 1.0 |
| J047 | chr2 | 189696369 | 189705022 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0134 | 0.2008 | NA | NA | NA | 4.9 | 7.3 | 4.0 | 11.9 | 8.8 | 8.7 |
| J048 | chr2 | 189696369 | 189706937 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0614 | 0.5485 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 1.0 | 4.9 | 2.9 |
| J049 | chr2 | 189705224 | 189706937 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.0297 | 0.62 | NA | NA | NA | 3.0 | 7.3 | 4.0 | 2.0 | 6.9 | 4.8 |
| J050 | chr2 | 189707146 | 189711048 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0988 | 0.3173 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 0.0 | 0.0 | 1.9 |
| J051 | chr2 | 189707146 | 189719571 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.298 | 0.08407 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 4.0 | 0.0 | 1.0 |
| J052 | chr2 | 189711153 | 189719571 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.156 | 0.07117 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
| J053 | chr2 | 189719813 | 189720618 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0304 | 0.5127 | NA | NA | NA | 3.9 | 4.2 | 3.0 | 4.0 | 1.0 | 4.8 |
| J054 | chr2 | 189720787 | 189727822 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J055 | chr2 | 189720787 | 189727855 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.0951 | 0.6883 | NA | NA | NA | 3.9 | 2.1 | 2.0 | 5.0 | 0.0 | 2.9 |
| J056 | chr2 | 189728097 | 189728266 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0597 | 0.8725 | NA | NA | NA | 1.0 | 6.3 | 2.0 | 2.0 | 2.9 | 4.8 |
| J057 | chr2 | 189728420 | 189728659 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.0342 | 0.06555 | NA | NA | NA | 3.0 | 1.0 | 0.0 | 5.0 | 4.9 | 3.9 |
| J058 | chr2 | 189728420 | 189737682 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.152 | 0.2024 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 2.9 | 1.9 |
| J059 | chr2 | 189728821 | 189730494 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.194 | 0.2414 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 4.0 | 1.0 | 0.0 |
| J060 | chr2 | 189728821 | 189737682 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.355 | 0.7869 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 2.0 | 0.0 |
| J061 | chr2 | 189728821 | 189741341 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.268 | 0.8817 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| J062 | chr2 | 189730601 | 189733106 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J063 | chr2 | 189733229 | 189737682 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.566 | 0.6559 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| J064 | chr2 | 189737841 | 189738564 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.0869 | 0.1722 | NA | NA | NA | 0.0 | 1.0 | 0.0 | 2.0 | 2.0 | 1.0 |
| J065 | chr2 | 189738682 | 189741341 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.0438 | 0.5923 | NA | NA | NA | 2.0 | 0.0 | 4.0 | 4.0 | 2.9 | 2.9 |
| J066 | chr2 | 189741451 | 189743274 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J067 | chr2 | 189741451 | 189744741 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.3 | 0.185 | 0.1369 | NA | NA | NA | 3.0 | 2.1 | 9.1 | 2.0 | 0.0 | 3.9 |
| J068 | chr2 | 189743474 | 189744741 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J069 | chr2 | 189744788 | 189746379 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.12 | 0.25 | NA | NA | NA | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | 1.0 |
| J070 | chr2 | 189744788 | 189752934 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.566 | 0.6559 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| J071 | chr2 | 189744788 | 189761097 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| N072 | chr2 | 189747168 | 189750549 | TRUE | OK | 13.8 | 0.00855 | 0.002078 | 0.1943 | -1.127 | -0.563 | 17.7 | 19.8 | 15.1 | 10.9 | 11.8 | 7.7 |
| N073 | chr2 | 189747331 | 189750549 | TRUE | OK | 53.4 | 0.00333 | 0.00144 | 0.1614 | -0.673 | -0.336 | 52.3 | 63.6 | 57.4 | 48.6 | 46.0 | 52.2 |
| N074 | chr2 | 189750656 | 189752652 | TRUE | OK | 75.5 | 0.00438 | 1.069e-05 | 0.005846 | -0.897 | -0.448 | 75.9 | 86.5 | 87.6 | 68.5 | 60.7 | 73.5 |
| N075 | chr2 | 189752724 | 189752848 | TRUE | OK | 80.4 | 0.0131 | 0.007307 | 0.3465 | -0.700 | -0.350 | 70.0 | 110.5 | 74.5 | 78.4 | 81.3 | 67.7 |
| N076 | chr2 | 189752979 | 189753915 | TRUE | OK | 58.6 | 0.0237 | 0.6358 | 0.8997 | 0.135 | 0.068 | 50.3 | 68.8 | 35.3 | 73.5 | 68.5 | 55.1 |
| N077 | chr2 | 189754064 | 189754140 | TRUE | OK | 64.3 | 0.00363 | 0.7022 | 0.9205 | -0.076 | -0.038 | 58.2 | 64.6 | 56.4 | 72.5 | 72.5 | 61.9 |
| N078 | chr2 | 189754345 | 189755172 | TRUE | OK | 72.5 | 0.0123 | 0.1016 | 0.6994 | -0.400 | -0.200 | 74.9 | 65.7 | 76.5 | 79.4 | 74.4 | 63.8 |
| N079 | chr2 | 189755560 | 189761419 | TRUE | OK | 68.9 | 0.0279 | 0.07766 | 0.6747 | -0.562 | -0.281 | 78.9 | 57.3 | 78.6 | 68.5 | 65.6 | 64.8 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000151687.14 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |