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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 61362343 | 61362360 | TRUE | OK | 34.2 | 0.0231 | 0.2296 | 0.7689 | 0.402 | 0.201 | 27.6 | 25.0 | 42.3 | 28.8 | 30.4 | 51.2 |
E002 | chr11 | 61362360 | 61362373 | TRUE | OK | 40.0 | 0.0143 | 0.2822 | 0.7856 | 0.303 | 0.152 | 39.4 | 29.2 | 46.3 | 32.8 | 36.2 | 56.1 |
E003 | chr11 | 61362373 | 61362385 | TRUE | OK | 65.3 | 0.00555 | 0.01955 | 0.4882 | 0.448 | 0.224 | 64.1 | 45.9 | 68.5 | 66.5 | 67.6 | 79.3 |
E004 | chr11 | 61362385 | 61362386 | TRUE | OK | 64.3 | 0.007 | 0.05268 | 0.6323 | 0.391 | 0.195 | 65.1 | 45.9 | 68.5 | 66.5 | 62.7 | 77.3 |
E005 | chr11 | 61362386 | 61362420 | TRUE | OK | 176.4 | 0.0145 | 0.8975 | 0.9755 | -0.046 | -0.023 | 225.8 | 154.3 | 188.4 | 174.7 | 171.4 | 144.1 |
E006 | chr11 | 61362668 | 61364249 | TRUE | OK | 27.8 | 0.00679 | 5.612e-05 | 0.02063 | 1.083 | 0.542 | 23.7 | 17.7 | 17.1 | 28.8 | 38.2 | 41.6 |
E007 | chr11 | 61364249 | 61364251 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0745 | 0.5153 | NA | NA | NA | 9.9 | 3.1 | 7.1 | 11.9 | 7.8 | 3.9 |
E008 | chr11 | 61364251 | 61364315 | TRUE | OK | 257.6 | 0.01 | 0.7639 | 0.9395 | -0.071 | -0.036 | 314.5 | 228.4 | 292.1 | 239.3 | 247.8 | 223.3 |
E009 | chr11 | 61364315 | 61364432 | TRUE | OK | 439.1 | 0.017 | 0.9358 | 0.9848 | -0.043 | -0.022 | 540.3 | 370.2 | 500.6 | 419.9 | 404.4 | 399.3 |
E010 | chr11 | 61364432 | 61364518 | TRUE | OK | 455.1 | 0.0213 | 0.724 | 0.9274 | 0.059 | 0.030 | 559.1 | 363.9 | 504.6 | 453.7 | 421.1 | 428.3 |
E011 | chr11 | 61364518 | 61364802 | TRUE | OK | 36.6 | 0.0591 | 0.3274 | 0.8002 | 0.377 | 0.189 | 42.4 | 13.6 | 46.3 | 26.8 | 43.1 | 47.4 |
E012 | chr11 | 61365702 | 61366044 | TRUE | OK | 30.5 | 0.0424 | 0.2206 | 0.7649 | 0.535 | 0.267 | 36.5 | 17.7 | 26.2 | 19.9 | 51.9 | 30.9 |
E013 | chr11 | 61366044 | 61366216 | TRUE | OK | 540.3 | 0.00886 | 0.8948 | 0.9748 | 0.007 | 0.004 | 652.7 | 522.4 | 540.9 | 505.3 | 501.4 | 519.2 |
E014 | chr11 | 61366216 | 61366557 | TRUE | OK | 60.9 | 0.0243 | 0.06105 | 0.6496 | 0.573 | 0.287 | 38.5 | 50.1 | 70.5 | 51.6 | 63.7 | 90.9 |
E015 | chr11 | 61366557 | 61366978 | TRUE | OK | 88.5 | 0.015 | 0.1642 | 0.7413 | 0.357 | 0.178 | 74.9 | 75.1 | 100.7 | 61.6 | 106.7 | 112.2 |
E016 | chr11 | 61366978 | 61367427 | TRUE | OK | 92.7 | 0.0248 | 0.1915 | 0.7544 | 0.415 | 0.208 | 84.8 | 67.8 | 104.8 | 59.6 | 125.3 | 114.1 |
E017 | chr11 | 61367427 | 61367540 | TRUE | OK | 58.2 | 0.0366 | 0.6269 | 0.8967 | 0.171 | 0.085 | 67.0 | 34.4 | 73.5 | 35.7 | 73.4 | 64.8 |
E018 | chr11 | 61367540 | 61367904 | TRUE | OK | 109.5 | 0.0261 | 0.09545 | 0.6944 | 0.529 | 0.264 | 109.4 | 74.0 | 108.8 | 72.5 | 155.7 | 136.3 |
E019 | chr11 | 61367904 | 61367922 | TRUE | OK | 49.0 | 0.0167 | 0.03902 | 0.5898 | 0.587 | 0.293 | 45.4 | 31.3 | 50.4 | 35.7 | 60.7 | 70.6 |
E020 | chr11 | 61367922 | 61367998 | TRUE | OK | 337.9 | 0.00234 | 0.08321 | 0.6811 | -0.188 | -0.094 | 381.6 | 392.1 | 353.5 | 272.0 | 303.6 | 324.9 |
E021 | chr11 | 61367998 | 61368251 | TRUE | OK | 49.5 | 0.0236 | 0.4317 | 0.8336 | 0.260 | 0.130 | 41.4 | 39.6 | 63.5 | 31.8 | 53.9 | 66.7 |
E022 | chr11 | 61368251 | 61368283 | TRUE | OK | 24.5 | 0.00899 | 0.6623 | 0.9083 | 0.131 | 0.065 | 25.6 | 20.9 | 28.2 | 16.9 | 31.3 | 24.2 |
E023 | chr11 | 61368283 | 61368556 | TRUE | OK | 48.5 | 0.0118 | 0.1219 | 0.7175 | 0.405 | 0.202 | 40.4 | 52.1 | 42.3 | 33.8 | 62.7 | 59.9 |
E024 | chr11 | 61368556 | 61368583 | TRUE | OK | 26.2 | 0.0158 | 0.2187 | 0.7644 | 0.388 | 0.194 | 18.7 | 33.4 | 21.2 | 20.8 | 30.4 | 32.9 |
E025 | chr11 | 61368596 | 61368751 | TRUE | OK | 357.5 | 0.013 | 0.1393 | 0.7293 | -0.313 | -0.157 | 402.3 | 475.5 | 349.5 | 301.8 | 303.6 | 312.3 |
E026 | chr11 | 61368751 | 61368769 | TRUE | OK | 201.1 | 0.0103 | 0.02008 | 0.4928 | -0.455 | -0.228 | 251.4 | 265.9 | 204.5 | 166.8 | 146.9 | 171.1 |
E027 | chr11 | 61368769 | 61368771 | TRUE | OK | 190.6 | 0.00804 | 0.01638 | 0.4626 | -0.429 | -0.215 | 235.7 | 248.2 | 196.4 | 157.9 | 144.9 | 160.5 |
E028 | chr11 | 61368771 | 61369211 | TRUE | OK | 453.3 | 0.0119 | 0.02183 | 0.5055 | -0.451 | -0.225 | 531.5 | 599.6 | 462.3 | 357.4 | 356.5 | 412.8 |
E029 | chr11 | 61369211 | 61369509 | TRUE | OK | 22.4 | 0.019 | 0.2269 | 0.7676 | -0.418 | -0.209 | 32.5 | 28.2 | 20.1 | 19.9 | 11.8 | 22.2 |
J030 | chr11 | 61362420 | 61364251 | TRUE | OK | 165.3 | 0.0182 | 0.7611 | 0.9387 | -0.093 | -0.047 | 216.9 | 140.8 | 182.3 | 159.8 | 164.5 | 127.6 |
J031 | chr11 | 61364315 | 61364432 | TRUE | OK | 17.4 | 0.00616 | 0.08066 | 0.678 | 0.549 | 0.275 | 14.8 | 15.6 | 15.1 | 15.9 | 21.5 | 21.3 |
J032 | chr11 | 61364315 | 61366044 | TRUE | OK | 11.0 | 0.0105 | 0.008759 | 0.3735 | -1.080 | -0.540 | 17.7 | 11.5 | 17.1 | 4.0 | 7.8 | 7.7 |
J033 | chr11 | 61364518 | 61366044 | TRUE | OK | 304.7 | 0.0175 | 0.3167 | 0.7964 | 0.202 | 0.101 | 382.6 | 231.5 | 303.2 | 303.8 | 299.7 | 307.5 |
J034 | chr11 | 61366216 | 61367427 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0873 | 0.05744 | NA | NA | NA | 5.9 | 1.0 | 8.1 | 1.0 | 1.0 | 1.9 |
J035 | chr11 | 61366216 | 61367922 | TRUE | OK | 216.0 | 0.00365 | 0.06555 | 0.6555 | -0.247 | -0.124 | 246.5 | 265.9 | 222.6 | 177.7 | 183.1 | 200.1 |
J036 | chr11 | 61367998 | 61368251 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.018 | 0.5441 | NA | NA | NA | 5.9 | 6.3 | 6.0 | 3.0 | 5.9 | 3.9 |
J037 | chr11 | 61367998 | 61368596 | TRUE | OK | 170.0 | 0.0101 | 0.2169 | 0.7636 | -0.249 | -0.125 | 183.4 | 227.3 | 169.2 | 147.9 | 145.9 | 146.0 |
J038 | chr11 | 61367998 | 61368771 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.2 | 0.0162 | 0.3296 | NA | NA | NA | 8.9 | 10.4 | 7.1 | 7.9 | 3.9 | 4.8 |
N039 | chr11 | 61367998 | 61368599 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0106 | 0.8492 | NA | NA | NA | 9.9 | 9.4 | 11.1 | 6.9 | 7.8 | 10.6 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000149483.12 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |