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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr15 | 75843284 | 75843306 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0748 | 0.5888 | NA | NA | NA | 2.0 | 1.0 | 5.0 | 1.0 | 2.0 | 2.9 |
E002 | chr15 | 75843306 | 75843567 | TRUE | OK | 215.3 | 0.522 | 0.3528 | 0.8083 | -0.593 | -0.296 | 268.2 | 228.4 | 262.9 | 273.0 | 246.8 | 12.6 |
E003 | chr15 | 75843567 | 75843846 | TRUE | OK | 507.4 | 0.025 | 0.2695 | 0.7822 | -0.265 | -0.132 | 610.3 | 465.1 | 542.9 | 584.8 | 525.9 | 315.2 |
E004 | chr15 | 75844043 | 75844146 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0538 | 0.4768 | NA | NA | NA | 9.9 | 5.2 | 5.0 | 15.9 | 4.9 | 7.7 |
E005 | chr15 | 75844146 | 75844485 | TRUE | OK | 32.1 | 0.0632 | 0.08541 | 0.684 | 0.718 | 0.359 | 26.6 | 8.3 | 36.3 | 35.7 | 44.1 | 41.6 |
E006 | chr15 | 75844485 | 75844589 | TRUE | OK | 18.9 | 0.0643 | 0.02235 | 0.5086 | 1.105 | 0.553 | 12.8 | 3.1 | 19.1 | 23.8 | 31.3 | 23.2 |
E007 | chr15 | 75854385 | 75854487 | TRUE | OK | 421.4 | 0.00313 | 0.5255 | 0.8641 | 0.067 | 0.034 | 446.7 | 363.9 | 403.9 | 463.6 | 421.1 | 429.3 |
E008 | chr15 | 75859877 | 75859885 | TRUE | OK | 235.2 | 0.0037 | 0.02827 | 0.5445 | 0.278 | 0.139 | 233.7 | 180.4 | 214.5 | 270.0 | 252.7 | 260.1 |
E009 | chr15 | 75859885 | 75859939 | TRUE | OK | 298.9 | 0.00223 | 0.01191 | 0.4147 | 0.265 | 0.132 | 287.9 | 244.0 | 272.0 | 352.4 | 307.5 | 329.7 |
E010 | chr15 | 75859939 | 75859982 | TRUE | OK | 284.7 | 0.00197 | 0.1028 | 0.7007 | 0.168 | 0.084 | 272.1 | 243.0 | 277.0 | 330.6 | 281.1 | 304.6 |
E011 | chr15 | 75868950 | 75869010 | TRUE | OK | 502.1 | 0.00104 | 0.002998 | 0.2346 | 0.230 | 0.115 | 461.5 | 455.7 | 456.3 | 581.8 | 522.0 | 535.6 |
E012 | chr15 | 75873427 | 75873568 | TRUE | OK | 791.7 | 0.00211 | 5.51e-05 | 0.02031 | 0.360 | 0.180 | 719.8 | 642.3 | 728.2 | 938.2 | 832.4 | 889.5 |
E013 | chr15 | 75876186 | 75876271 | TRUE | OK | 689.9 | 0.00715 | 0.01834 | 0.4783 | 0.346 | 0.173 | 665.6 | 507.8 | 650.7 | 826.0 | 707.0 | 782.2 |
E014 | chr15 | 75877960 | 75878021 | TRUE | OK | 516.3 | 0.0106 | 0.2041 | 0.7593 | 0.228 | 0.114 | 527.5 | 387.9 | 497.6 | 635.4 | 470.1 | 579.1 |
E015 | chr15 | 75878185 | 75878360 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.126 | 0.9581 | NA | NA | NA | 2.0 | 1.0 | 3.0 | 5.0 | 0.0 | 1.9 |
E016 | chr15 | 75879097 | 75879188 | TRUE | OK | 518.7 | 0.0142 | 0.5426 | 0.8696 | 0.126 | 0.063 | 548.2 | 396.2 | 523.8 | 606.6 | 439.7 | 597.5 |
E017 | chr15 | 75883365 | 75883424 | TRUE | OK | 501.7 | 0.00686 | 0.1886 | 0.7528 | 0.190 | 0.095 | 504.8 | 393.1 | 492.5 | 549.0 | 497.5 | 573.3 |
E018 | chr15 | 75890434 | 75890483 | TRUE | OK | 499.8 | 0.0084 | 0.2992 | 0.7915 | 0.160 | 0.080 | 528.5 | 388.9 | 481.5 | 537.1 | 497.5 | 565.6 |
E019 | chr15 | 75890918 | 75891014 | TRUE | OK | 631.0 | 0.0076 | 0.248 | 0.775 | 0.170 | 0.085 | 652.7 | 497.4 | 613.4 | 677.1 | 635.6 | 709.7 |
E020 | chr15 | 75896994 | 75897061 | TRUE | OK | 620.4 | 0.00342 | 0.1308 | 0.7239 | 0.162 | 0.081 | 623.2 | 518.2 | 596.3 | 682.0 | 634.6 | 668.1 |
E021 | chr15 | 75897061 | 75897062 | TRUE | OK | 12.9 | 0.0233 | 0.5543 | 0.873 | -0.244 | -0.122 | 13.8 | 9.4 | 18.1 | 14.9 | 14.7 | 6.8 |
E022 | chr15 | 75899426 | 75899494 | TRUE | OK | 723.1 | 0.00503 | 0.2864 | 0.7872 | 0.137 | 0.068 | 700.1 | 620.4 | 724.2 | 816.1 | 669.8 | 808.3 |
E023 | chr15 | 75899494 | 75899577 | TRUE | OK | 730.0 | 0.00553 | 0.2829 | 0.7859 | 0.143 | 0.071 | 714.9 | 618.3 | 727.2 | 820.0 | 678.6 | 820.8 |
E024 | chr15 | 75899577 | 75899650 | TRUE | OK | 655.6 | 0.00609 | 0.4608 | 0.8432 | 0.097 | 0.048 | 665.6 | 530.7 | 678.9 | 726.7 | 632.6 | 699.0 |
E025 | chr15 | 75899650 | 75901044 | TRUE | OK | 2043.7 | 0.00817 | 0.09824 | 0.6967 | -0.257 | -0.128 | 1975.0 | 2314.8 | 2026.5 | 2078.9 | 1891.0 | 1976.2 |
E026 | chr15 | 75901044 | 75901078 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.102 | 0.3136 | NA | NA | NA | 2.0 | 8.3 | 1.0 | 6.0 | 7.8 | 4.8 |
J027 | chr15 | 75843846 | 75854385 | TRUE | OK | 246.5 | 0.00666 | 0.7101 | 0.9229 | -0.067 | -0.034 | 293.8 | 209.6 | 238.7 | 260.1 | 236.0 | 240.7 |
J028 | chr15 | 75844485 | 75854385 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.1 | 0.0377 | 0.004885 | NA | NA | NA | 3.9 | 0.0 | 4.0 | 9.9 | 5.9 | 12.6 |
J029 | chr15 | 75844589 | 75854385 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.214 | 0.03766 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 6.9 | 1.0 |
J030 | chr15 | 75854487 | 75859877 | TRUE | OK | 226.3 | 0.00319 | 0.02484 | 0.5243 | 0.274 | 0.137 | 226.8 | 174.1 | 204.5 | 260.1 | 241.9 | 250.4 |
J031 | chr15 | 75854487 | 75868950 | TRUE | OK | 56.7 | 0.00337 | 0.1862 | 0.7512 | 0.245 | 0.122 | 54.2 | 55.3 | 43.3 | 68.5 | 64.6 | 54.1 |
J032 | chr15 | 75854487 | 75883365 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.166 | 0.9349 | NA | NA | NA | 1.0 | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 |
J033 | chr15 | 75859982 | 75868950 | TRUE | OK | 243.3 | 0.00145 | 0.2248 | 0.7667 | 0.122 | 0.061 | 225.8 | 222.1 | 239.7 | 280.0 | 229.2 | 263.0 |
J034 | chr15 | 75869010 | 75873427 | TRUE | OK | 389.0 | 0.000859 | 0.0002146 | 0.05202 | 0.294 | 0.147 | 330.3 | 357.7 | 350.5 | 460.7 | 413.3 | 421.5 |
J035 | chr15 | 75873568 | 75876186 | TRUE | OK | 533.8 | 0.00638 | 0.003563 | 0.2529 | 0.411 | 0.206 | 499.9 | 379.5 | 493.5 | 631.4 | 576.8 | 621.7 |
J036 | chr15 | 75873568 | 75883365 | TRUE | OK | 18.3 | 0.0149 | 0.6697 | 0.9102 | -0.151 | -0.075 | 22.7 | 21.9 | 12.1 | 16.9 | 21.5 | 14.5 |
J037 | chr15 | 75876271 | 75877960 | TRUE | OK | 406.8 | 0.00985 | 0.2138 | 0.7628 | 0.219 | 0.109 | 414.1 | 304.5 | 395.8 | 507.3 | 371.1 | 447.6 |
J038 | chr15 | 75878021 | 75879097 | TRUE | OK | 329.3 | 0.0179 | 0.4943 | 0.8539 | 0.169 | 0.085 | 349.0 | 248.2 | 319.3 | 409.0 | 261.5 | 388.7 |
J039 | chr15 | 75878360 | 75879097 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.558 | 0.5341 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J040 | chr15 | 75879188 | 75883365 | TRUE | OK | 380.4 | 0.00934 | 0.1499 | 0.7346 | 0.243 | 0.122 | 373.7 | 281.5 | 377.7 | 429.9 | 365.3 | 454.4 |
J041 | chr15 | 75883424 | 75890434 | TRUE | OK | 359.0 | 0.00624 | 0.5469 | 0.871 | 0.080 | 0.040 | 378.6 | 287.8 | 363.6 | 371.3 | 362.3 | 390.6 |
J042 | chr15 | 75883424 | 75896994 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.0285 | 0.5708 | NA | NA | NA | 9.9 | 3.1 | 8.1 | 4.0 | 5.9 | 7.7 |
J043 | chr15 | 75883424 | 75899426 | TRUE | OK | 19.7 | 0.00981 | 0.6015 | 0.8885 | 0.171 | 0.085 | 15.8 | 19.8 | 19.1 | 28.8 | 13.7 | 21.3 |
J044 | chr15 | 75890483 | 75890918 | TRUE | OK | 390.6 | 0.00823 | 0.239 | 0.7717 | 0.185 | 0.092 | 407.2 | 300.3 | 374.7 | 419.0 | 388.8 | 453.4 |
J045 | chr15 | 75891014 | 75896994 | TRUE | OK | 436.1 | 0.00803 | 0.208 | 0.7606 | 0.192 | 0.096 | 464.4 | 336.8 | 404.9 | 467.6 | 451.4 | 491.2 |
J046 | chr15 | 75897061 | 75899426 | TRUE | OK | 488.5 | 0.00258 | 0.08512 | 0.6838 | 0.173 | 0.087 | 473.3 | 417.1 | 470.4 | 535.1 | 486.7 | 548.2 |
N047 | chr15 | 75869010 | 75876186 | TRUE | OK | 13.6 | 0.03 | 0.09829 | 0.6967 | -0.740 | -0.370 | 19.7 | 8.3 | 22.2 | 12.9 | 7.8 | 10.6 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000140367.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |