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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 23528955 | 23528966 | TRUE | OK | 53.9 | 0.00979 | 0.2247 | 0.7667 | 0.279 | 0.140 | 32.5 | 42.8 | 58.4 | 49.6 | 66.6 | 73.5 |
E002 | chr8 | 23528966 | 23528974 | TRUE | OK | 194.2 | 0.00204 | 5.137e-05 | 0.01927 | 0.463 | 0.232 | 143.0 | 127.2 | 177.3 | 234.3 | 240.9 | 242.7 |
E003 | chr8 | 23528974 | 23529052 | TRUE | OK | 365.5 | 0.00211 | 0.005002 | 0.2963 | 0.277 | 0.138 | 295.8 | 256.5 | 358.6 | 397.1 | 415.2 | 469.9 |
E004 | chr8 | 23529052 | 23529059 | TRUE | OK | 427.1 | 0.0023 | 0.008364 | 0.3664 | 0.257 | 0.128 | 345.1 | 298.2 | 430.1 | 466.6 | 485.7 | 536.6 |
E005 | chr8 | 23529059 | 23529212 | TRUE | OK | 704.4 | 0.00386 | 0.06468 | 0.6547 | 0.201 | 0.100 | 621.2 | 478.6 | 714.1 | 732.7 | 808.9 | 871.1 |
E006 | chr8 | 23531684 | 23531925 | TRUE | OK | 51.5 | 0.035 | 0.437 | 0.8352 | -0.314 | -0.157 | 31.6 | 71.9 | 55.4 | 54.6 | 44.1 | 51.2 |
E007 | chr8 | 23541469 | 23541561 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0398 | 0.9004 | NA | NA | NA | 3.0 | 3.1 | 4.0 | 2.0 | 3.9 | 6.8 |
E008 | chr8 | 23541561 | 23541686 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0307 | 0.7775 | NA | NA | NA | 6.9 | 3.1 | 4.0 | 5.0 | 3.9 | 5.8 |
E009 | chr8 | 23541686 | 23541839 | TRUE | OK | 20.7 | 0.0114 | 0.2562 | 0.7777 | 0.357 | 0.178 | 10.8 | 18.8 | 20.1 | 27.8 | 25.5 | 21.3 |
E010 | chr8 | 23541839 | 23541856 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.5 | 0.0328 | 0.5509 | NA | NA | NA | 5.9 | 3.1 | 5.0 | 6.0 | 2.9 | 3.9 |
E011 | chr8 | 23543087 | 23543211 | TRUE | OK | 34.0 | 0.00622 | 0.03003 | 0.552 | 0.531 | 0.265 | 28.6 | 18.8 | 28.2 | 37.7 | 49.0 | 41.6 |
E012 | chr8 | 23566107 | 23566336 | TRUE | OK | 837.5 | 0.0131 | 0.1343 | 0.7261 | 0.265 | 0.132 | 794.7 | 485.9 | 832.0 | 883.6 | 965.6 | 1063.5 |
E013 | chr8 | 23566336 | 23566378 | TRUE | OK | 355.6 | 0.0118 | 0.02473 | 0.5236 | 0.405 | 0.202 | 321.4 | 189.8 | 331.4 | 411.0 | 417.2 | 463.1 |
E014 | chr8 | 23566378 | 23566385 | TRUE | OK | 323.6 | 0.0127 | 0.01895 | 0.483 | 0.441 | 0.220 | 293.8 | 168.9 | 292.1 | 379.2 | 378.0 | 429.3 |
E015 | chr8 | 23566385 | 23566682 | TRUE | OK | 754.9 | 0.00907 | 0.1034 | 0.7012 | 0.246 | 0.123 | 698.1 | 461.9 | 754.4 | 836.9 | 852.0 | 926.2 |
E016 | chr8 | 23566682 | 23566775 | TRUE | OK | 477.4 | 0.00353 | 0.6914 | 0.9172 | 0.039 | 0.019 | 446.7 | 355.6 | 497.6 | 519.2 | 487.7 | 557.9 |
E017 | chr8 | 23566775 | 23566813 | TRUE | OK | 477.2 | 0.00367 | 0.1468 | 0.7333 | 0.158 | 0.079 | 431.9 | 329.5 | 483.5 | 530.1 | 521.0 | 567.5 |
E018 | chr8 | 23566813 | 23566940 | TRUE | OK | 399.9 | 0.00509 | 0.7734 | 0.9423 | 0.028 | 0.014 | 374.7 | 289.9 | 428.1 | 449.7 | 404.4 | 452.5 |
E019 | chr8 | 23566940 | 23566965 | TRUE | OK | 219.9 | 0.00739 | 0.7727 | 0.9421 | -0.059 | -0.030 | 199.2 | 164.7 | 255.8 | 248.2 | 203.7 | 247.5 |
E020 | chr8 | 23566965 | 23568258 | TRUE | OK | 1896.0 | 0.00783 | 0.7169 | 0.9251 | 0.036 | 0.018 | 1809.3 | 1326.3 | 2047.7 | 1929.0 | 2115.2 | 2148.3 |
E021 | chr8 | 23568258 | 23568321 | TRUE | OK | 352.0 | 0.0041 | 0.6858 | 0.9154 | 0.044 | 0.022 | 348.1 | 250.3 | 357.6 | 348.5 | 388.8 | 418.6 |
E022 | chr8 | 23568321 | 23568378 | TRUE | OK | 442.8 | 0.00429 | 0.1505 | 0.7349 | 0.177 | 0.088 | 416.1 | 312.8 | 418.0 | 453.7 | 488.7 | 567.5 |
E023 | chr8 | 23568378 | 23568965 | TRUE | OK | 170.1 | 0.00684 | 0.2597 | 0.7791 | -0.180 | -0.090 | 174.5 | 139.7 | 186.3 | 150.9 | 154.7 | 214.6 |
E024 | chr8 | 23571334 | 23571463 | TRUE | OK | 575.0 | 0.00216 | 0.06281 | 0.652 | 0.176 | 0.088 | 518.6 | 456.7 | 516.7 | 619.5 | 633.6 | 704.8 |
E025 | chr8 | 23571463 | 23571474 | TRUE | OK | 373.0 | 0.0023 | 0.03398 | 0.57 | 0.218 | 0.109 | 334.3 | 288.8 | 327.3 | 408.0 | 414.2 | 465.0 |
E026 | chr8 | 23571474 | 23571590 | TRUE | OK | 520.4 | 0.00217 | 0.0298 | 0.5513 | 0.206 | 0.103 | 472.3 | 391.0 | 471.4 | 571.8 | 578.8 | 637.1 |
E027 | chr8 | 23571590 | 23571858 | TRUE | OK | 793.8 | 0.00522 | 0.7938 | 0.9482 | 0.040 | 0.020 | 697.1 | 751.8 | 714.1 | 821.0 | 871.6 | 906.9 |
E028 | chr8 | 23571858 | 23572203 | TRUE | OK | 636.2 | 0.0259 | 0.3581 | 0.8103 | -0.273 | -0.136 | 510.8 | 829.0 | 580.2 | 585.7 | 656.1 | 655.5 |
E029 | chr8 | 23572203 | 23572221 | TRUE | OK | 173.3 | 0.0289 | 0.5221 | 0.8629 | -0.224 | -0.112 | 126.2 | 235.7 | 156.1 | 160.8 | 169.4 | 191.4 |
E030 | chr8 | 23572221 | 23575463 | TRUE | OK | 1779.5 | 0.00817 | 0.08368 | 0.6817 | -0.263 | -0.131 | 1554.9 | 1842.5 | 1872.4 | 1699.7 | 1884.1 | 1823.5 |
J031 | chr8 | 23529212 | 23531684 | TRUE | OK | 36.6 | 0.0276 | 0.2891 | 0.7882 | -0.389 | -0.195 | 21.7 | 49.0 | 45.3 | 31.8 | 35.3 | 36.7 |
J032 | chr8 | 23529212 | 23566107 | TRUE | OK | 412.7 | 0.011 | 0.2974 | 0.791 | 0.173 | 0.086 | 377.6 | 251.3 | 441.2 | 409.0 | 455.4 | 541.4 |
J033 | chr8 | 23541839 | 23543087 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.0988 | 0.3507 | NA | NA | NA | 0.0 | 4.2 | 1.0 | 2.0 | 4.9 | 3.9 |
J034 | chr8 | 23541856 | 23543087 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.141 | 0.8224 | NA | NA | NA | 2.0 | 0.0 | 2.0 | 3.0 | 0.0 | 1.0 |
J035 | chr8 | 23541856 | 23566107 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0527 | 0.7748 | NA | NA | NA | 3.0 | 0.0 | 3.0 | 1.0 | 2.0 | 2.9 |
J036 | chr8 | 23543211 | 23566107 | TRUE | OK | 19.2 | 0.0187 | 0.002149 | 0.1983 | 1.137 | 0.569 | 13.8 | 6.3 | 12.1 | 23.8 | 37.2 | 22.2 |
J037 | chr8 | 23566336 | 23568258 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.442 | 0.883 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 3.9 |
J038 | chr8 | 23566336 | 23568321 | TRUE | OK | 14.4 | 0.00986 | 0.4181 | 0.8295 | 0.294 | 0.147 | 13.8 | 13.6 | 8.1 | 12.9 | 18.6 | 19.3 |
J039 | chr8 | 23566813 | 23568321 | TRUE | OK | 55.9 | 0.00537 | 0.01061 | 0.4004 | 0.521 | 0.261 | 45.4 | 36.5 | 43.3 | 67.5 | 58.8 | 84.1 |
J040 | chr8 | 23566940 | 23568321 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.9 | 0.0264 | 0.1453 | NA | NA | NA | 6.9 | 1.0 | 8.1 | 12.9 | 7.8 | 10.6 |
J041 | chr8 | 23566965 | 23568321 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.6 | 0.046 | 0.04567 | NA | NA | NA | 2.0 | 1.0 | 0.0 | 3.0 | 2.9 | 6.8 |
J042 | chr8 | 23568378 | 23571334 | TRUE | OK | 295.4 | 0.00247 | 0.0557 | 0.6392 | 0.213 | 0.106 | 254.4 | 235.7 | 263.9 | 313.7 | 318.3 | 386.7 |
J043 | chr8 | 23568378 | 23571474 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0834 | 0.03944 | NA | NA | NA | 3.0 | 2.1 | 1.0 | 0.0 | 1.0 | 0.0 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000147454.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |