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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr11 | 124633112 | 124635788 | TRUE | OK | 774.2 | 0.00099 | 0.0003079 | 0.06586 | -0.255 | -0.127 | 814.4 | 799.8 | 810.8 | 767.4 | 721.7 | 730.9 |
E002 | chr11 | 124635788 | 124636846 | TRUE | OK | 766.6 | 0.00801 | 0.4502 | 0.8396 | -0.127 | -0.063 | 726.7 | 909.3 | 684.9 | 767.4 | 768.7 | 742.5 |
E003 | chr11 | 124636846 | 124637202 | TRUE | OK | 423.6 | 0.00147 | 0.739 | 0.9324 | -0.030 | -0.015 | 432.9 | 431.7 | 384.8 | 445.8 | 416.2 | 430.2 |
E004 | chr11 | 124638541 | 124638737 | TRUE | OK | 408.9 | 0.00342 | 0.4192 | 0.8299 | 0.090 | 0.045 | 438.8 | 365.0 | 356.6 | 440.8 | 414.2 | 438.0 |
E005 | chr11 | 124639709 | 124639867 | TRUE | OK | 372.7 | 0.00752 | 0.1588 | 0.7384 | 0.213 | 0.106 | 407.2 | 293.0 | 314.3 | 391.2 | 404.4 | 426.4 |
E006 | chr11 | 124647364 | 124647498 | TRUE | OK | 386.3 | 0.0167 | 0.1897 | 0.7538 | 0.268 | 0.134 | 424.0 | 249.2 | 358.6 | 428.9 | 417.2 | 439.9 |
E007 | chr11 | 124648065 | 124648175 | TRUE | OK | 229.5 | 0.011 | 0.04227 | 0.6014 | 0.377 | 0.188 | 230.7 | 147.0 | 208.5 | 272.0 | 252.7 | 265.9 |
E008 | chr11 | 124649618 | 124649796 | TRUE | OK | 281.4 | 0.00857 | 0.2587 | 0.7785 | 0.183 | 0.092 | 290.9 | 204.4 | 277.0 | 316.7 | 310.4 | 289.1 |
E009 | chr11 | 124654654 | 124654793 | TRUE | OK | 246.7 | 0.00987 | 0.991 | 0.9978 | -0.014 | -0.007 | 280.0 | 188.7 | 254.8 | 269.0 | 251.7 | 235.9 |
E010 | chr11 | 124658873 | 124660627 | TRUE | OK | 18.8 | 0.0336 | 0.8544 | 0.9643 | -0.101 | -0.051 | 11.8 | 29.2 | 16.1 | 17.9 | 22.5 | 15.5 |
E011 | chr11 | 124660627 | 124660803 | TRUE | OK | 309.0 | 0.0129 | 0.5717 | 0.8788 | 0.102 | 0.051 | 312.6 | 224.2 | 335.4 | 347.5 | 291.8 | 342.3 |
E012 | chr11 | 124669359 | 124669435 | TRUE | OK | 225.6 | 0.0214 | 0.3637 | 0.8117 | 0.199 | 0.100 | 194.2 | 148.1 | 273.0 | 250.2 | 236.0 | 252.3 |
E013 | chr11 | 124669435 | 124669521 | TRUE | OK | 201.4 | 0.0202 | 0.4631 | 0.8438 | 0.153 | 0.077 | 172.6 | 137.6 | 247.8 | 224.4 | 205.6 | 220.4 |
E014 | chr11 | 124669521 | 124669612 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.7 | 0.235 | 0.6266 | NA | NA | NA | 0.0 | 2.1 | 4.0 | 2.0 | 6.9 | 1.0 |
E015 | chr11 | 124673641 | 124673821 | TRUE | OK | 135.7 | 0.0176 | 0.7325 | 0.9303 | 0.059 | 0.029 | 121.3 | 97.0 | 170.2 | 138.0 | 138.1 | 149.9 |
E016 | chr11 | 124673821 | 124673881 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.146 | 0.1115 | NA | NA | NA | 1.0 | 1.0 | 3.0 | 0.0 | 0.0 | 1.0 |
E017 | chr11 | 124675257 | 124675402 | TRUE | OK | 555.2 | 0.00238 | 0.02435 | 0.5211 | 0.220 | 0.110 | 527.5 | 513.0 | 473.4 | 601.6 | 568.0 | 647.8 |
E018 | chr11 | 124675570 | 124675677 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0437 | 0.6739 | NA | NA | NA | 4.9 | 1.0 | 3.0 | 5.0 | 3.9 | 2.9 |
E019 | chr11 | 124675677 | 124675679 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.078 | 0.4983 | NA | NA | NA | 3.0 | 1.0 | 2.0 | 1.0 | 1.0 | 1.9 |
E020 | chr11 | 124676184 | 124676303 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.0605 | 0.9347 | NA | NA | NA | 3.0 | 1.0 | 3.0 | 1.0 | 3.9 | 2.9 |
E021 | chr11 | 124694282 | 124694521 | TRUE | OK | 494.8 | 0.00476 | 0.4134 | 0.8282 | -0.109 | -0.054 | 476.2 | 568.3 | 450.2 | 502.4 | 466.1 | 505.7 |
E022 | chr11 | 124695608 | 124695707 | TRUE | OK | 33.1 | 0.0272 | 0.04719 | 0.6173 | 0.719 | 0.359 | 29.6 | 21.9 | 21.2 | 58.6 | 40.2 | 27.1 |
J023 | chr11 | 124637202 | 124638541 | TRUE | OK | 212.2 | 0.00128 | 0.1315 | 0.7241 | -0.155 | -0.077 | 233.7 | 215.8 | 202.5 | 210.5 | 198.8 | 211.7 |
J024 | chr11 | 124638737 | 124639709 | TRUE | OK | 187.5 | 0.00875 | 0.09756 | 0.6965 | 0.284 | 0.142 | 208.0 | 150.2 | 137.0 | 208.5 | 199.8 | 221.4 |
J025 | chr11 | 124639867 | 124647364 | TRUE | OK | 263.8 | 0.0104 | 0.1702 | 0.7443 | 0.240 | 0.120 | 290.9 | 187.7 | 230.7 | 281.0 | 285.9 | 306.5 |
J026 | chr11 | 124647498 | 124648065 | TRUE | OK | 165.6 | 0.0179 | 0.1571 | 0.7379 | 0.317 | 0.159 | 173.5 | 98.0 | 160.1 | 190.6 | 175.3 | 196.3 |
J027 | chr11 | 124648175 | 124649618 | TRUE | OK | 150.1 | 0.00883 | 0.08411 | 0.6822 | 0.310 | 0.155 | 154.8 | 100.1 | 137.0 | 182.7 | 165.5 | 160.5 |
J028 | chr11 | 124649796 | 124654654 | TRUE | OK | 141.7 | 0.00299 | 0.2909 | 0.789 | 0.142 | 0.071 | 142.0 | 110.5 | 141.0 | 152.9 | 156.7 | 147.0 |
J029 | chr11 | 124654793 | 124660627 | TRUE | OK | 143.8 | 0.0126 | 0.6675 | 0.9096 | -0.101 | -0.050 | 170.6 | 109.5 | 154.1 | 164.8 | 131.2 | 132.5 |
J030 | chr11 | 124660803 | 124669359 | TRUE | OK | 172.1 | 0.0184 | 0.2401 | 0.7723 | 0.269 | 0.135 | 150.9 | 112.6 | 193.4 | 190.6 | 170.4 | 214.6 |
J031 | chr11 | 124669521 | 124673641 | TRUE | OK | 134.6 | 0.0177 | 0.6941 | 0.9181 | 0.071 | 0.036 | 119.3 | 95.9 | 168.2 | 138.0 | 138.1 | 147.9 |
J032 | chr11 | 124669521 | 124675257 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0719 | 0.8529 | NA | NA | NA | 0.0 | 2.1 | 2.0 | 1.0 | 2.9 | 1.0 |
J033 | chr11 | 124675402 | 124675570 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.132 | 0.06965 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 5.0 | 1.0 | 1.0 |
J034 | chr11 | 124675402 | 124694282 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J035 | chr11 | 124675677 | 124676184 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J036 | chr11 | 124694521 | 124695608 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
N037 | chr11 | 124673952 | 124675237 | TRUE | OK | 219.4 | 0.00169 | 5.273e-05 | 0.01967 | 0.433 | 0.217 | 191.3 | 166.8 | 190.4 | 260.1 | 239.9 | 267.8 |
N038 | chr11 | 124675418 | 124681388 | TRUE | OK | 434.1 | 0.00383 | 0.06745 | 0.6586 | 0.221 | 0.110 | 404.3 | 408.7 | 367.6 | 448.7 | 442.6 | 532.7 |
N039 | chr11 | 124681459 | 124691695 | TRUE | OK | 385.9 | 0.00473 | 0.5863 | 0.8835 | 0.075 | 0.037 | 377.6 | 382.7 | 340.4 | 401.1 | 355.5 | 458.3 |
N040 | chr11 | 124691782 | 124694302 | TRUE | OK | 277.2 | 0.00474 | 0.4164 | 0.8291 | -0.111 | -0.055 | 266.2 | 315.9 | 257.8 | 277.0 | 245.8 | 300.7 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000110013.12 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |