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Raw Counts Table (ENSG00000144455.14)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr3	3700813	3702461	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E002	chr3	3777724	3777803	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E003	chr3	3779240	3779322	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E004	chr3	3781351	3782502	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.865	0.6225	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	1.0
E005	chr3	3782502	3782637	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E006	chr3	3782637	3782701	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E007	chr3	3788913	3789074	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.853	0.5764	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
E008	chr3	3795238	3795295	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E009	chr3	3795295	3795428	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E010	chr3	3797900	3798214	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.745	0.4138	NA	NA	NA	0.0	0.0	0.0	2.0	0.0	0.0
E011	chr3	3799711	3799896	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.809	0.3892	NA	NA	NA	0.0	0.0	2.0	0.0	0.0	0.0
E012	chr3	3800700	3800875	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E013	chr3	3822733	3822897	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.771	0.3831	NA	NA	NA	2.0	0.0	0.0	0.0	0.0	0.0
E014	chr3	3827241	3827509	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.185	0.9676	NA	NA	NA	1.0	1.0	0.0	1.0	1.0	0.0
E015	chr3	4068568	4068745	FALSE	LOW_COUNTS_INDEP_FILTER	9.4	0.0177	0.07308	NA	NA	NA	7.0	6.0	7.0	15.0	13.0	9.0
E016	chr3	4361145	4361765	TRUE	OK	807.2	0.00628	0.06289	0.6522	-0.277	-0.138	775.0	1002.0	738.0	819.0	728.0	791.0
E017	chr3	4361765	4361794	TRUE	OK	211.3	0.00172	0.2187	0.7644	-0.134	-0.067	217.0	236.0	193.0	216.0	191.0	219.0
E018	chr3	4361794	4362108	TRUE	OK	573.6	0.00231	0.5602	0.8748	0.058	0.029	557.0	603.0	496.0	585.0	548.0	669.0
E019	chr3	4362108	4362254	TRUE	OK	477.3	0.00354	0.8633	0.9668	0.025	0.013	465.0	491.0	434.0	473.0	443.0	572.0
E020	chr3	4376329	4376389	TRUE	OK	399.9	0.00132	0.5215	0.8628	-0.055	-0.027	406.0	412.0	374.0	408.0	383.0	427.0
E021	chr3	4410864	4410978	TRUE	OK	460.8	0.00247	0.7979	0.9492	-0.023	-0.012	464.0	465.0	432.0	446.0	455.0	516.0
E022	chr3	4417127	4417242	TRUE	OK	425.6	0.00909	0.3244	0.7993	0.170	0.085	459.0	358.0	373.0	439.0	449.0	493.0
E023	chr3	4418009	4418132	TRUE	OK	382.9	0.011	0.3523	0.8081	0.176	0.088	420.0	307.0	341.0	427.0	381.0	437.0
E024	chr3	4420063	4420146	TRUE	OK	360.3	0.00601	0.1799	0.7489	0.201	0.101	377.0	319.0	299.0	426.0	343.0	411.0
E025	chr3	4449265	4449340	TRUE	OK	341.0	0.00541	0.5668	0.8771	0.088	0.044	361.0	313.0	301.0	399.0	316.0	367.0
E026	chr3	4452875	4453049	TRUE	OK	525.5	0.00442	0.1714	0.7446	0.178	0.089	525.0	465.0	478.0	587.0	518.0	599.0
E027	chr3	4466975	4467261	TRUE	OK	404.4	0.00509	0.1653	0.742	0.193	0.096	387.0	350.0	384.0	451.0	429.0	440.0
E028	chr3	4467261	4467264	FALSE	LOW_COUNTS_INDEP_FILTER	3.6	0.0524	0.1799	NA	NA	NA	1.0	2.0	4.0	4.0	3.0	8.0
E029	chr3	4467264	4467269	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0451	0.1848	NA	NA	NA	1.0	2.0	3.0	4.0	3.0	6.0
E030	chr3	4467269	4467273	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0921	0.5543	NA	NA	NA	1.0	1.0	3.0	1.0	2.0	5.0
J031	chr3	3702461	3777724	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J032	chr3	3777803	3779240	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J033	chr3	3779322	3782502	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J034	chr3	3782701	3788913	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J035	chr3	3789074	3795295	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J036	chr3	3789074	3800700	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J037	chr3	3789074	3822733	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.5382	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J038	chr3	3795428	3797900	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J039	chr3	3795428	3799711	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J040	chr3	3822897	3827241	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.5382	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J041	chr3	3827509	4068568	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J042	chr3	4068745	4376329	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0183	0.202	NA	NA	NA	5.0	5.0	5.0	9.0	11.0	5.0
J043	chr3	4362254	4376329	TRUE	OK	298.3	0.00128	0.08574	0.6845	-0.159	-0.079	317.0	315.0	286.0	289.0	269.0	321.0
J044	chr3	4362254	4410864	TRUE	OK	12.0	0.0492	0.4411	0.8366	0.442	0.221	9.0	10.0	11.0	6.0	15.0	22.0
J045	chr3	4376389	4410864	TRUE	OK	300.5	0.000979	0.2286	0.7685	-0.106	-0.053	295.0	324.0	291.0	300.0	281.0	319.0
J046	chr3	4410978	4417127	TRUE	OK	247.4	0.00523	0.2741	0.7831	0.161	0.080	253.0	222.0	215.0	241.0	271.0	292.0
J047	chr3	4410978	4452875	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0581	0.8766	NA	NA	NA	3.0	0.0	3.0	3.0	1.0	3.0
J048	chr3	4417242	4418009	TRUE	OK	267.8	0.0141	0.3542	0.8087	0.197	0.099	294.0	201.0	245.0	287.0	268.0	324.0
J049	chr3	4418132	4420063	TRUE	OK	237.9	0.0107	0.215	0.7632	0.239	0.119	262.0	192.0	193.0	292.0	229.0	269.0
J050	chr3	4420146	4449265	TRUE	OK	240.9	0.00274	0.1118	0.7093	0.194	0.097	238.0	216.0	210.0	287.0	230.0	273.0
J051	chr3	4420146	4452875	TRUE	OK	10.3	0.102	0.7655	0.9399	0.118	0.059	17.0	9.0	3.0	14.0	13.0	6.0
J052	chr3	4449340	4452875	TRUE	OK	231.8	0.00408	0.947	0.9875	0.017	0.008	247.0	224.0	206.0	256.0	199.0	266.0
J053	chr3	4453049	4466975	TRUE	OK	297.6	0.00575	0.1519	0.7355	0.213	0.107	284.0	247.0	286.0	326.0	320.0	334.0
N054	chr3	4303526	4312897	TRUE	OK	48.3	0.0148	0.06376	0.6532	-0.492	-0.246	65.0	41.0	60.0	46.0	39.0	40.0
N055	chr3	4303526	4313646	TRUE	OK	17.6	0.00795	0.3511	0.8077	-0.296	-0.148	24.0	19.0	14.0	14.0	15.0	20.0
N056	chr3	4303526	4316211	TRUE	OK	19.6	0.00662	0.0554	0.6384	-0.574	-0.287	26.0	20.0	23.0	15.0	18.0	16.0
N057	chr3	4313761	4316211	TRUE	OK	56.8	0.00295	1.001e-05	0.005518	-0.812	-0.406	67.0	72.0	73.0	43.0	38.0	48.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000144455.14
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE