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Normalized Counts Table (ENSG00000144445.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr2	210021420	210022432	TRUE	OK	682.0	0.00712	6.136e-06	0.003689	-0.680	-0.339	658.7	685.1	646.6	706.9	660.0	734.8
E002	chr2	210022432	210023121	TRUE	OK	275.7	0.00226	0.2609	0.7793	0.122	0.061	237.6	184.6	236.7	333.6	329.0	332.6
E003	chr2	210023121	210023179	TRUE	OK	130.8	0.00295	0.01024	0.3946	0.369	0.184	93.7	98.0	90.7	155.9	168.4	177.9
E004	chr2	210024032	210024201	TRUE	OK	119.5	0.00532	0.003683	0.2564	0.493	0.246	91.7	79.2	73.5	148.9	139.1	184.7
E005	chr2	210025103	210025216	TRUE	OK	95.7	0.0031	5.922e-05	0.02149	0.641	0.321	69.0	51.1	62.4	129.1	120.5	142.1
E006	chr2	210026379	210026402	TRUE	OK	11.1	0.0308	0.2242	0.7665	-0.582	-0.291	8.9	7.3	18.1	11.9	11.8	8.7
E007	chr2	210027295	210027350	TRUE	OK	59.5	0.0044	6.942e-07	0.0006222	1.006	0.503	31.6	29.2	34.2	79.4	84.2	98.6
E008	chr2	210028844	210028969	TRUE	OK	75.5	0.00319	1.673e-05	0.008281	0.753	0.376	45.4	43.8	47.3	104.2	106.7	105.4
E009	chr2	210029802	210029806	TRUE	OK	41.0	0.00535	0.0005159	0.09081	0.808	0.404	26.6	17.7	27.2	56.6	61.7	56.1
E010	chr2	210029806	210029918	TRUE	OK	54.5	0.00619	6.405e-05	0.02282	0.867	0.434	39.4	21.9	31.2	77.4	85.2	71.5
E011	chr2	210031420	210031546	TRUE	OK	47.4	0.00489	0.007787	0.3561	0.570	0.285	36.5	21.9	34.2	60.6	64.6	66.7
E012	chr2	210040322	210040419	FALSE	LOW_COUNTS_INDEP_FILTER	4.0	0.0548	0.03604	NA	NA	NA	3.9	3.1	9.1	4.0	2.0	1.9
E013	chr2	210040419	210040527	TRUE	OK	49.9	0.00503	0.000999	0.1318	0.703	0.352	31.6	21.9	38.3	67.5	69.5	70.6
E014	chr2	210043432	210043938	FALSE	LOW_COUNTS_INDEP_FILTER	6.3	0.0238	0.06111	NA	NA	NA	7.9	7.3	7.1	3.0	4.9	7.7
E015	chr2	210043938	210044104	TRUE	OK	63.2	0.00383	0.05691	0.6417	0.354	0.177	52.3	41.7	42.3	75.5	85.2	82.2
E016	chr2	210075551	210075756	TRUE	OK	69.8	0.0194	0.1723	0.7451	0.344	0.172	72.0	46.9	32.2	91.3	85.2	90.9
E017	chr2	210079804	210079898	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.451	0.8963	NA	NA	NA	1.0	0.0	0.0	0.0	2.0	0.0
E018	chr2	210080276	210080340	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.125	0.7331	NA	NA	NA	1.0	1.0	0.0	2.0	1.0	1.0
E019	chr2	210097848	210098085	TRUE	OK	26.0	0.00771	0.8731	0.9692	0.042	0.021	20.7	17.7	25.2	30.8	34.3	27.1
E020	chr2	210098085	210098207	TRUE	OK	74.1	0.00675	0.2158	0.7634	0.245	0.122	68.0	50.1	49.4	101.3	75.4	100.6
E021	chr2	210104019	210104103	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.195	0.1115	NA	NA	NA	0.0	0.0	0.0	2.0	1.0	1.0
E022	chr2	210104103	210104195	TRUE	OK	78.3	0.0147	0.09228	0.691	0.394	0.197	77.9	42.8	45.3	111.2	86.2	106.4
E023	chr2	210104195	210104301	TRUE	OK	78.2	0.0208	0.1234	0.719	0.383	0.191	80.9	33.4	52.4	105.2	100.9	96.7
E024	chr2	210129030	210129172	TRUE	OK	88.5	0.00466	0.005893	0.3171	0.476	0.238	75.9	46.9	58.4	123.1	116.5	110.2
E025	chr2	210151404	210153494	TRUE	OK	93.9	0.0109	0.89	0.9737	-0.050	-0.025	105.5	57.3	75.5	96.3	112.6	116.0
E026	chr2	210153494	210153603	TRUE	OK	108.0	0.00938	0.02164	0.5041	0.458	0.229	91.7	58.4	73.5	163.8	136.1	124.7
E027	chr2	210153603	210153665	TRUE	OK	83.5	0.0101	0.1916	0.7544	0.274	0.137	68.0	45.9	72.5	112.2	113.6	88.9
E028	chr2	210153665	210153738	TRUE	OK	77.4	0.00725	0.01725	0.4701	0.476	0.238	56.2	41.7	60.4	106.2	111.6	88.0
E029	chr2	210153738	210154182	TRUE	OK	200.1	0.00823	0.00335	0.2457	0.509	0.254	138.0	105.3	167.2	250.2	274.2	265.9
E030	chr2	210154182	210154611	TRUE	OK	155.3	0.00651	0.001896	0.185	0.519	0.259	127.2	78.2	109.8	192.6	192.9	231.1
E031	chr2	210155193	210155302	TRUE	OK	12.2	0.0345	0.3972	0.823	0.355	0.178	13.8	2.1	10.1	17.9	14.7	14.5
E032	chr2	210170221	210170336	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.106	0.4302	NA	NA	NA	1.0	3.1	1.0	2.0	0.0	1.9
E033	chr2	210170336	210170594	FALSE	LOW_COUNTS_INDEP_FILTER	5.8	0.0299	0.9165	NA	NA	NA	7.9	4.2	2.0	6.0	5.9	8.7
E034	chr2	210170594	210170654	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.099	0.8498	NA	NA	NA	2.0	0.0	1.0	2.0	1.0	1.9
E035	chr2	210171148	210171327	TRUE	OK	33.4	0.024	0.08498	0.6836	0.563	0.281	32.5	12.5	20.1	40.7	37.2	57.0
E036	chr2	210171327	210171409	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.853	0.4654	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J037	chr2	210023179	210024032	TRUE	OK	66.3	0.00428	3.736e-06	0.002508	0.890	0.445	48.3	33.4	30.2	91.3	86.2	108.3
J038	chr2	210024201	210025103	TRUE	OK	60.2	0.0104	0.04141	0.5989	0.491	0.246	44.4	39.6	38.3	77.4	60.7	100.6
J039	chr2	210025216	210026379	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J040	chr2	210025216	210027295	TRUE	OK	43.3	0.00326	6.855e-07	0.0006164	1.095	0.547	21.7	18.8	25.2	62.5	62.7	68.6
J041	chr2	210026402	210027295	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J042	chr2	210027350	210028844	TRUE	OK	39.2	0.00346	2.498e-06	0.001811	1.086	0.543	18.7	20.9	20.1	56.6	58.8	59.9
J043	chr2	210028969	210029802	TRUE	OK	40.0	0.00389	6.741e-05	0.02367	0.906	0.453	24.7	15.6	26.2	56.6	60.7	56.1
J044	chr2	210029918	210031420	TRUE	OK	26.0	0.0103	0.01083	0.4032	0.759	0.380	21.7	10.4	14.1	35.7	43.1	30.9
J045	chr2	210029918	210040419	FALSE	LOW_COUNTS_INDEP_FILTER	8.1	0.0143	0.005345	NA	NA	NA	3.9	2.1	4.0	14.9	13.7	9.7
J046	chr2	210031546	210040419	TRUE	OK	22.9	0.00531	0.004331	0.2766	0.832	0.416	13.8	10.4	15.1	30.8	30.4	36.7
J047	chr2	210040527	210043938	TRUE	OK	29.0	0.00513	0.02767	0.5407	0.572	0.286	16.8	15.6	24.2	34.7	41.1	41.6
J048	chr2	210044104	210075551	TRUE	OK	33.3	0.0177	0.5339	0.8667	0.167	0.084	37.5	25.0	15.1	38.7	42.1	41.6
J049	chr2	210075756	210098085	TRUE	OK	29.2	0.00571	0.473	0.8471	0.182	0.091	29.6	20.9	17.1	34.7	31.3	41.6
J050	chr2	210079898	210080276	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J051	chr2	210080340	210098085	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.257	0.1501	NA	NA	NA	1.0	1.0	0.0	0.0	0.0	0.0
J052	chr2	210098207	210104103	TRUE	OK	48.5	0.0156	0.09677	0.6957	0.456	0.228	44.4	29.2	26.2	73.5	47.0	70.6
J053	chr2	210104301	210129030	TRUE	OK	43.0	0.0348	0.224	0.7664	0.382	0.191	48.3	16.7	26.2	55.6	63.7	47.4
J054	chr2	210129172	210153494	TRUE	OK	54.9	0.00313	0.0009026	0.1244	0.642	0.321	38.5	29.2	36.3	82.4	69.5	73.5
J055	chr2	210154611	210155193	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0314	0.9044	NA	NA	NA	9.9	1.0	6.0	6.9	7.8	7.7
J056	chr2	210154611	210170221	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.7362	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J057	chr2	210154611	210170336	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.354	0.4355	NA	NA	NA	2.0	0.0	0.0	0.0	2.0	4.8
J058	chr2	210154611	210171148	TRUE	OK	26.6	0.0363	0.3025	0.7921	0.355	0.178	31.6	9.4	16.1	31.8	29.4	41.6

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000144445.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE