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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr3 | 15042459 | 15043022 | TRUE | OK | 644.5 | 0.00385 | 0.008624 | 0.3709 | 0.304 | 0.152 | 636.0 | 574.5 | 611.4 | 629.4 | 688.4 | 727.1 |
E002 | chr3 | 15045098 | 15045243 | TRUE | OK | 309.7 | 0.0311 | 0.08711 | 0.6856 | 0.479 | 0.240 | 324.4 | 176.2 | 316.3 | 334.6 | 362.3 | 344.2 |
E003 | chr3 | 15048511 | 15049211 | TRUE | OK | 661.1 | 0.00151 | 7.2e-07 | 0.0006393 | 0.400 | 0.200 | 552.2 | 677.8 | 581.2 | 661.2 | 728.6 | 765.7 |
E004 | chr3 | 15049211 | 15049707 | TRUE | OK | 165.6 | 0.00217 | 0.9288 | 0.9832 | -0.008 | -0.004 | 164.7 | 173.1 | 179.3 | 144.0 | 163.5 | 169.2 |
E005 | chr3 | 15049707 | 15049880 | TRUE | OK | 188.1 | 0.00799 | 0.08318 | 0.6811 | -0.292 | -0.146 | 212.0 | 191.9 | 236.7 | 133.0 | 166.5 | 188.5 |
E006 | chr3 | 15049880 | 15049935 | TRUE | OK | 143.6 | 0.0158 | 0.2935 | 0.7896 | -0.230 | -0.115 | 176.5 | 134.5 | 169.2 | 93.3 | 138.1 | 149.9 |
E007 | chr3 | 15049935 | 15049967 | TRUE | OK | 101.4 | 0.0197 | 0.7206 | 0.9263 | -0.079 | -0.040 | 125.2 | 88.6 | 109.8 | 67.5 | 112.6 | 104.4 |
E008 | chr3 | 15049967 | 15050102 | TRUE | OK | 154.6 | 0.0116 | 0.323 | 0.7988 | -0.190 | -0.095 | 180.4 | 147.0 | 183.3 | 107.2 | 147.9 | 161.5 |
E009 | chr3 | 15050102 | 15051716 | TRUE | OK | 806.3 | 0.0121 | 0.2031 | 0.7589 | -0.239 | -0.119 | 892.3 | 769.5 | 1023.3 | 616.5 | 748.2 | 788.0 |
E010 | chr3 | 15051716 | 15052434 | TRUE | OK | 1494.6 | 0.00885 | 0.04294 | 0.6033 | -0.339 | -0.169 | 1483.0 | 2071.9 | 1505.8 | 1264.8 | 1202.6 | 1439.6 |
E011 | chr3 | 15052434 | 15052633 | TRUE | OK | 2124.4 | 0.0157 | 0.3071 | 0.7936 | -0.239 | -0.119 | 1998.6 | 2949.9 | 2025.5 | 1957.8 | 1773.5 | 2041.0 |
E012 | chr3 | 15053290 | 15053379 | TRUE | OK | 41.8 | 0.0066 | 0.2783 | 0.7843 | -0.253 | -0.126 | 37.5 | 60.5 | 43.3 | 36.7 | 38.2 | 34.8 |
E013 | chr3 | 15053379 | 15053467 | TRUE | OK | 1643.7 | 0.00425 | 0.9107 | 0.9788 | 0.010 | 0.005 | 1657.5 | 1909.2 | 1537.0 | 1596.4 | 1467.9 | 1693.9 |
E014 | chr3 | 15059368 | 15059475 | TRUE | OK | 1582.0 | 0.00367 | 0.4321 | 0.8336 | 0.087 | 0.044 | 1622.0 | 1629.8 | 1562.2 | 1575.6 | 1426.8 | 1675.5 |
E015 | chr3 | 15065060 | 15065260 | TRUE | OK | 1731.1 | 0.00283 | 0.4878 | 0.852 | 0.068 | 0.034 | 1768.9 | 1772.6 | 1755.6 | 1702.6 | 1605.0 | 1781.9 |
E016 | chr3 | 15065260 | 15065300 | TRUE | OK | 742.0 | 0.00221 | 0.9544 | 0.9894 | 0.008 | 0.004 | 733.6 | 784.1 | 786.6 | 721.8 | 655.1 | 770.6 |
E017 | chr3 | 15065300 | 15065311 | TRUE | OK | 214.4 | 0.00682 | 0.7993 | 0.9497 | -0.035 | -0.017 | 231.7 | 231.5 | 211.5 | 229.3 | 170.4 | 211.7 |
E018 | chr3 | 15065311 | 15065315 | TRUE | OK | 21.5 | 0.0538 | 0.4591 | 0.8426 | -0.326 | -0.163 | 20.7 | 35.5 | 18.1 | 23.8 | 7.8 | 23.2 |
E019 | chr3 | 15065315 | 15065317 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0205 | 0.6955 | NA | NA | NA | 5.9 | 7.3 | 6.0 | 6.0 | 5.9 | 8.7 |
J020 | chr3 | 15043022 | 15049707 | TRUE | OK | 16.9 | 0.043 | 0.02682 | 0.536 | -0.989 | -0.495 | 16.8 | 30.2 | 22.2 | 8.9 | 4.9 | 18.4 |
J021 | chr3 | 15045243 | 15049707 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0384 | 0.7594 | NA | NA | NA | 2.0 | 5.2 | 1.0 | 2.0 | 2.9 | 3.9 |
J022 | chr3 | 15049935 | 15053290 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.55 | 0.5772 | NA | NA | NA | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J023 | chr3 | 15049935 | 15053379 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.0 | 0.0551 | 0.3265 | NA | NA | NA | 1.0 | 4.2 | 3.0 | 2.0 | 2.0 | 0.0 |
J024 | chr3 | 15052633 | 15053290 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.2 | 0.0407 | 0.1733 | NA | NA | NA | 2.0 | 4.2 | 7.1 | 1.0 | 2.9 | 1.9 |
J025 | chr3 | 15052633 | 15053379 | TRUE | OK | 945.2 | 0.0062 | 0.9013 | 0.9764 | -0.028 | -0.014 | 912.1 | 1188.7 | 865.2 | 921.3 | 833.4 | 950.4 |
J026 | chr3 | 15052633 | 15059368 | TRUE | OK | 13.1 | 0.0119 | 0.4556 | 0.8413 | -0.270 | -0.135 | 12.8 | 16.7 | 15.1 | 9.9 | 6.9 | 17.4 |
J027 | chr3 | 15053467 | 15059368 | TRUE | OK | 1063.7 | 0.00162 | 0.3377 | 0.8033 | 0.077 | 0.039 | 1076.7 | 1127.2 | 1035.4 | 1030.5 | 974.4 | 1138.0 |
J028 | chr3 | 15059475 | 15065060 | TRUE | OK | 1082.3 | 0.00533 | 0.4511 | 0.8398 | 0.100 | 0.050 | 1144.8 | 1059.4 | 1069.7 | 1100.0 | 969.5 | 1150.5 |
N029 | chr3 | 15039227 | 15042833 | TRUE | OK | 170.2 | 0.0632 | 0.004347 | 0.2774 | 1.145 | 0.572 | 161.7 | 55.3 | 121.9 | 214.4 | 236.0 | 232.0 |
N030 | chr3 | 15047305 | 15049707 | TRUE | OK | 19.8 | 0.0103 | 0.6196 | 0.8944 | 0.159 | 0.080 | 20.7 | 13.6 | 24.2 | 15.9 | 22.5 | 22.2 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000131368.8 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |