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Raw Counts Table (ENSG00000143224.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Raw Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	161166055	161166173	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.306	0.5287	NA	NA	NA	0.0	2.0	0.0	3.0	2.0	0.0
E002	chr1	161166409	161166425	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.038	0.6997	NA	NA	NA	4.0	4.0	2.0	4.0	3.0	4.0
E003	chr1	161166425	161166429	FALSE	LOW_COUNTS_INDEP_FILTER	5.5	0.0287	0.964	NA	NA	NA	6.0	4.0	4.0	8.0	4.0	7.0
E004	chr1	161166429	161166438	FALSE	LOW_COUNTS_INDEP_FILTER	8.9	0.033	0.8089	NA	NA	NA	9.0	5.0	8.0	14.0	6.0	12.0
E005	chr1	161166438	161166446	TRUE	OK	28.5	0.0213	0.4378	0.8355	-0.248	-0.124	30.0	23.0	28.0	38.0	21.0	32.0
E006	chr1	161166446	161166451	TRUE	OK	34.0	0.0147	0.3033	0.7925	-0.292	-0.146	36.0	31.0	31.0	43.0	26.0	38.0
E007	chr1	161166451	161166461	TRUE	OK	40.2	0.0179	0.4461	0.8383	-0.215	-0.108	43.0	33.0	37.0	51.0	31.0	48.0
E008	chr1	161166461	161166466	TRUE	OK	47.4	0.0243	0.4033	0.825	-0.256	-0.128	56.0	38.0	41.0	60.0	36.0	55.0
E009	chr1	161166466	161166469	TRUE	OK	55.5	0.0263	0.3121	0.7949	-0.309	-0.155	66.0	49.0	46.0	70.0	40.0	64.0
E010	chr1	161166469	161166479	TRUE	OK	64.2	0.024	0.4319	0.8336	-0.241	-0.120	79.0	52.0	51.0	79.0	53.0	74.0
E011	chr1	161166479	161166481	TRUE	OK	67.0	0.0238	0.4894	0.8525	-0.212	-0.106	82.0	54.0	52.0	82.0	56.0	79.0
E012	chr1	161166481	161166497	TRUE	OK	80.8	0.017	0.3386	0.8036	-0.245	-0.123	92.0	68.0	69.0	99.0	70.0	90.0
E013	chr1	161166497	161166611	TRUE	OK	172.8	0.0118	0.6754	0.9121	-0.087	-0.044	176.0	135.0	151.0	207.0	172.0	203.0
E014	chr1	161166611	161166672	TRUE	OK	179.1	0.00552	0.8394	0.9605	0.033	0.016	158.0	137.0	164.0	202.0	192.0	230.0
E015	chr1	161166677	161166839	TRUE	OK	23.6	0.0088	0.03876	0.5888	0.623	0.312	12.0	19.0	16.0	23.0	36.0	37.0
E016	chr1	161166839	161166894	TRUE	OK	235.7	0.0113	0.7704	0.9413	0.059	0.029	213.0	177.0	209.0	288.0	238.0	300.0
E017	chr1	161166894	161166934	TRUE	OK	207.8	0.0129	0.4363	0.8349	0.167	0.083	181.0	148.0	179.0	259.0	208.0	282.0
E018	chr1	161167099	161167120	TRUE	OK	186.7	0.0165	0.608	0.8906	0.133	0.066	164.0	134.0	164.0	226.0	173.0	269.0
E019	chr1	161167120	161167234	TRUE	OK	252.5	0.00804	0.7146	0.9244	0.067	0.033	224.0	197.0	219.0	292.0	256.0	339.0
E020	chr1	161167234	161167338	TRUE	OK	68.2	0.00989	0.2539	0.7769	0.270	0.135	46.0	53.0	60.0	64.0	79.0	111.0
E021	chr1	161167338	161167354	TRUE	OK	51.7	0.00729	0.3979	0.8232	0.198	0.099	38.0	45.0	41.0	49.0	57.0	83.0
E022	chr1	161167354	161167370	TRUE	OK	79.7	0.0045	0.6492	0.9042	0.084	0.042	68.0	72.0	60.0	84.0	83.0	115.0
E023	chr1	161167370	161167379	TRUE	OK	164.1	0.0029	0.6676	0.9096	0.060	0.030	145.0	137.0	134.0	175.0	178.0	223.0
E024	chr1	161167379	161167486	TRUE	OK	232.1	0.00292	0.7824	0.9451	0.036	0.018	215.0	197.0	182.0	247.0	257.0	305.0
E025	chr1	161167609	161167707	FALSE	LOW_COUNTS_INDEP_FILTER	7.5	0.0282	0.633	NA	NA	NA	5.0	8.0	8.0	3.0	9.0	12.0
E026	chr1	161167994	161168094	TRUE	OK	223.8	0.00197	0.1098	0.7077	0.180	0.090	186.0	189.0	169.0	253.0	264.0	292.0
E027	chr1	161168094	161168095	TRUE	OK	147.9	0.00409	0.04189	0.6004	0.300	0.150	109.0	131.0	102.0	176.0	168.0	208.0
E028	chr1	161168095	161168127	TRUE	OK	164.3	0.00286	0.0141	0.4388	0.325	0.163	122.0	140.0	115.0	194.0	193.0	230.0
E029	chr1	161168127	161168259	TRUE	OK	43.8	0.0563	0.1522	0.7355	0.714	0.357	22.0	24.0	38.0	27.0	79.0	76.0
E030	chr1	161168259	161168394	TRUE	OK	34.5	0.0358	0.24	0.7723	0.488	0.244	17.0	26.0	30.0	24.0	60.0	52.0
E031	chr1	161168394	161168406	TRUE	OK	21.9	0.0195	0.379	0.8165	0.300	0.150	9.0	23.0	18.0	20.0	32.0	30.0
E032	chr1	161168406	161168412	TRUE	OK	21.9	0.0185	0.4504	0.8396	0.253	0.127	9.0	23.0	19.0	20.0	30.0	31.0
E033	chr1	161168412	161168431	TRUE	OK	34.3	0.0063	0.4966	0.8546	0.167	0.083	23.0	35.0	25.0	34.0	43.0	47.0
E034	chr1	161168431	161168444	TRUE	OK	137.0	0.0106	0.2257	0.7672	0.227	0.113	86.0	136.0	103.0	168.0	155.0	179.0
E035	chr1	161168444	161168522	TRUE	OK	192.2	0.00325	0.02478	0.524	0.294	0.147	138.0	158.0	151.0	235.0	225.0	255.0
E036	chr1	161168522	161168545	TRUE	OK	170.9	0.00694	0.04397	0.6069	0.339	0.170	133.0	111.0	147.0	208.0	211.0	225.0
E037	chr1	161168545	161168576	TRUE	OK	167.1	0.00878	0.1776	0.748	0.245	0.123	136.0	113.0	147.0	209.0	194.0	212.0
E038	chr1	161168992	161169183	TRUE	OK	290.8	0.00237	0.2149	0.7632	0.141	0.071	257.0	227.0	235.0	308.0	350.0	382.0
E039	chr1	161169183	161169283	TRUE	OK	46.6	0.0187	0.4935	0.8536	0.233	0.116	33.0	42.0	35.0	33.0	63.0	76.0
E040	chr1	161169283	161169659	TRUE	OK	84.6	0.0247	0.5343	0.8669	0.241	0.121	69.0	61.0	70.0	58.0	123.0	132.0
E041	chr1	161169659	161169672	TRUE	OK	161.5	0.00252	0.6828	0.9145	-0.051	-0.025	155.0	141.0	130.0	164.0	182.0	204.0
E042	chr1	161169672	161169684	TRUE	OK	141.7	0.00503	0.5161	0.8611	-0.104	-0.052	148.0	121.0	112.0	150.0	155.0	170.0
E043	chr1	161169684	161169706	TRUE	OK	156.3	0.00531	0.4386	0.8357	-0.124	-0.062	161.0	139.0	123.0	170.0	165.0	186.0
E044	chr1	161169706	161169720	TRUE	OK	146.7	0.00326	0.6788	0.9132	-0.059	-0.030	142.0	133.0	113.0	159.0	162.0	177.0
E045	chr1	161169720	161169840	TRUE	OK	49.3	0.0425	0.8537	0.9641	0.094	0.047	29.0	37.0	57.0	33.0	78.0	64.0
E046	chr1	161169840	161169905	TRUE	OK	43.3	0.0512	0.8369	0.9598	0.117	0.059	22.0	37.0	48.0	26.0	66.0	63.0
E047	chr1	161169905	161169985	TRUE	OK	180.7	0.00201	0.9239	0.9822	0.012	0.006	162.0	161.0	143.0	190.0	208.0	228.0
E048	chr1	161169985	161170024	TRUE	OK	160.7	0.0055	0.2143	0.763	0.189	0.094	136.0	150.0	102.0	181.0	193.0	209.0
E049	chr1	161170260	161170408	TRUE	OK	20.5	0.0218	0.6001	0.8879	-0.184	-0.092	23.0	22.0	12.0	15.0	30.0	22.0
E050	chr1	161170408	161170519	TRUE	OK	202.3	0.0188	0.6627	0.9084	-0.149	-0.074	182.0	239.0	128.0	212.0	226.0	232.0
E051	chr1	161170519	161170581	TRUE	OK	22.6	0.00836	0.01996	0.4916	-0.679	-0.339	27.0	28.0	19.0	16.0	23.0	23.0
E052	chr1	161170581	161170619	TRUE	OK	21.9	0.0213	0.2158	0.7634	-0.421	-0.211	25.0	26.0	15.0	12.0	26.0	28.0
E053	chr1	161170619	161170679	TRUE	OK	178.2	0.0135	0.8465	0.9623	-0.065	-0.032	166.0	192.0	113.0	180.0	218.0	206.0
E054	chr1	161170679	161170769	TRUE	OK	206.6	0.0152	0.8006	0.9501	0.032	0.016	187.0	214.0	127.0	217.0	266.0	236.0
E055	chr1	161170906	161170949	TRUE	OK	143.6	0.0159	0.5365	0.8676	-0.176	-0.088	117.0	175.0	102.0	144.0	175.0	152.0
E056	chr1	161170949	161171033	TRUE	OK	24.3	0.0372	0.0659	0.656	-0.703	-0.351	30.0	30.0	20.0	13.0	35.0	18.0
E057	chr1	161171033	161171062	TRUE	OK	103.3	0.0157	0.5175	0.8615	-0.189	-0.095	77.0	131.0	77.0	99.0	121.0	117.0
E058	chr1	161171062	161171115	TRUE	OK	103.2	0.0167	0.4903	0.8528	-0.204	-0.102	74.0	132.0	80.0	96.0	121.0	118.0
E059	chr1	161171115	161171143	TRUE	OK	91.9	0.016	0.5174	0.8615	-0.195	-0.097	68.0	118.0	68.0	90.0	103.0	106.0
E060	chr1	161171143	161171160	TRUE	OK	54.7	0.0319	0.5692	0.8778	-0.265	-0.132	37.0	81.0	37.0	48.0	62.0	64.0
E061	chr1	161171160	161171176	TRUE	OK	43.4	0.0458	0.7118	0.9235	-0.244	-0.122	26.0	68.0	28.0	35.0	48.0	56.0
E062	chr1	161171176	161171181	TRUE	OK	32.5	0.0503	0.6038	0.8891	-0.298	-0.149	21.0	52.0	20.0	23.0	34.0	45.0
E063	chr1	161171181	161171214	TRUE	OK	24.5	0.0543	0.5566	0.8737	-0.332	-0.166	16.0	40.0	15.0	17.0	23.0	36.0
E064	chr1	161171214	161171218	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0771	0.2257	NA	NA	NA	1.0	4.0	2.0	1.0	1.0	2.0
E065	chr1	161171218	161171220	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.186	0.7896	NA	NA	NA	1.0	0.0	1.0	0.0	1.0	1.0
E066	chr1	161176848	161177041	TRUE	OK	61.8	0.00374	0.327	0.8	0.186	0.093	50.0	49.0	50.0	61.0	78.0	86.0
E067	chr1	161177041	161177092	TRUE	OK	42.2	0.00715	0.5435	0.8698	0.150	0.075	33.0	36.0	34.0	37.0	63.0	52.0
E068	chr1	161177092	161178013	TRUE	OK	400.6	0.0036	0.01386	0.4368	-0.298	-0.149	388.0	373.0	370.0	421.0	407.0	458.0
J069	chr1	161166173	161166839	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.6873	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J070	chr1	161166611	161166839	TRUE	OK	36.4	0.0284	0.7171	0.9252	0.122	0.061	39.0	29.0	22.0	54.0	33.0	43.0
J071	chr1	161166672	161166839	TRUE	OK	128.8	0.00677	0.6126	0.892	0.090	0.045	108.0	94.0	121.0	148.0	136.0	172.0
J072	chr1	161166934	161167099	TRUE	OK	172.6	0.0201	0.4848	0.8511	0.191	0.096	152.0	116.0	150.0	214.0	160.0	253.0
J073	chr1	161166934	161170619	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0983	0.9916	NA	NA	NA	1.0	2.0	0.0	2.0	2.0	0.0
J074	chr1	161167234	161167338	FALSE	LOW_COUNTS_INDEP_FILTER	5.2	0.0659	0.4676	NA	NA	NA	7.0	7.0	2.0	8.0	4.0	3.0
J075	chr1	161167234	161167354	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.0514	0.6775	NA	NA	NA	2.0	2.0	1.0	2.0	2.0	1.0
J076	chr1	161167234	161167370	TRUE	OK	85.3	0.00301	0.9369	0.9851	0.015	0.007	80.0	65.0	75.0	94.0	92.0	110.0
J077	chr1	161167234	161167994	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.304	0.37	NA	NA	NA	1.0	3.0	0.0	0.0	2.0	0.0
J078	chr1	161167234	161168431	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.232	0.8809	NA	NA	NA	1.0	2.0	2.0	1.0	6.0	0.0
J079	chr1	161167234	161169659	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0645	0.7097	NA	NA	NA	1.0	1.0	2.0	2.0	1.0	1.0
J080	chr1	161167234	161170619	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.152	0.02815	NA	NA	NA	1.0	7.0	2.0	0.0	1.0	1.0
J081	chr1	161167486	161167609	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.151	0.24	NA	NA	NA	0.0	1.0	2.0	1.0	0.0	0.0
J082	chr1	161167486	161167994	TRUE	OK	118.4	0.00476	0.6185	0.894	-0.083	-0.041	122.0	102.0	92.0	132.0	128.0	139.0
J083	chr1	161167486	161168412	FALSE	LOW_COUNTS_INDEP_FILTER	2.0	0.0708	0.644	NA	NA	NA	3.0	2.0	1.0	2.0	0.0	4.0
J084	chr1	161167707	161167994	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.287	0.04868	NA	NA	NA	0.0	1.0	3.0	0.0	0.0	0.0
J085	chr1	161168127	161168412	FALSE	LOW_COUNTS_INDEP_FILTER	5.8	0.0208	0.5452	NA	NA	NA	4.0	5.0	4.0	7.0	4.0	11.0
J086	chr1	161168127	161168431	TRUE	OK	95.3	0.0203	0.2441	0.7737	0.286	0.143	54.0	98.0	68.0	127.0	100.0	128.0
J087	chr1	161168127	161168444	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0462	0.3813	NA	NA	NA	3.0	0.0	3.0	3.0	3.0	7.0
J088	chr1	161168127	161168992	FALSE	LOW_COUNTS_INDEP_FILTER	5.8	0.0179	0.05246	NA	NA	NA	4.0	3.0	2.0	10.0	7.0	9.0
J089	chr1	161168576	161168992	TRUE	OK	136.8	0.0127	0.2762	0.7836	0.229	0.114	119.0	84.0	123.0	168.0	159.0	175.0
J090	chr1	161169183	161169659	TRUE	OK	118.9	0.002	0.6822	0.9144	-0.055	-0.027	114.0	108.0	92.0	124.0	135.0	145.0
J091	chr1	161169183	161170408	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J092	chr1	161169720	161169905	TRUE	OK	109.1	0.012	0.9543	0.9894	-0.023	-0.011	113.0	99.0	73.0	130.0	111.0	133.0
J093	chr1	161169720	161170408	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.0966	0.7565	NA	NA	NA	5.0	5.0	0.0	2.0	3.0	6.0
J094	chr1	161170024	161170408	TRUE	OK	101.1	0.0154	0.6759	0.9122	0.074	0.037	81.0	110.0	63.0	126.0	112.0	118.0
J095	chr1	161170024	161170619	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.551	0.4483	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J096	chr1	161170519	161170619	TRUE	OK	112.3	0.0159	0.9963	0.999	-0.030	-0.015	97.0	129.0	67.0	114.0	132.0	138.0
J097	chr1	161170581	161170679	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.308	0.9702	NA	NA	NA	1.0	0.0	4.0	3.0	3.0	0.0
J098	chr1	161170769	161170906	TRUE	OK	114.6	0.0159	0.7392	0.9325	0.054	0.027	95.0	125.0	70.0	127.0	149.0	125.0
J099	chr1	161170769	161176848	FALSE	LOW_COUNTS_INDEP_FILTER	1.0	0.106	0.7421	NA	NA	NA	1.0	0.0	2.0	0.0	2.0	1.0
J100	chr1	161170949	161171033	TRUE	OK	84.9	0.0129	0.4935	0.8536	-0.184	-0.092	62.0	106.0	66.0	85.0	96.0	96.0
N101	chr1	161172064	161172226	TRUE	OK	32.9	0.0291	0.2194	0.7646	-0.421	-0.211	33.0	37.0	29.0	46.0	27.0	26.0
N102	chr1	161172089	161172226	TRUE	OK	623.2	0.00372	1.328e-08	2.083e-05	-0.676	-0.337	605.0	681.0	601.0	606.0	595.0	665.0
N103	chr1	161172331	161173604	TRUE	OK	476.7	0.0126	0.00059	0.09804	-0.685	-0.342	478.0	519.0	478.0	511.0	410.0	473.0
N104	chr1	161173727	161173858	TRUE	OK	466.8	0.00559	0.000159	0.04266	-0.539	-0.269	461.0	514.0	420.0	469.0	476.0	471.0
N105	chr1	161174049	161174992	TRUE	OK	325.0	0.00263	7.551e-07	0.0006567	-0.555	-0.278	353.0	327.0	312.0	311.0	313.0	343.0
N106	chr1	161175228	161175807	TRUE	OK	436.1	0.00842	0.02358	0.5163	-0.384	-0.192	441.0	436.0	380.0	467.0	472.0	433.0
N107	chr1	161175893	161176433	TRUE	OK	12.0	0.0108	0.1945	0.7559	-0.498	-0.249	10.0	15.0	12.0	14.0	8.0	13.0
N108	chr1	161176074	161176433	TRUE	OK	324.1	0.00556	0.02713	0.5382	-0.319	-0.159	302.0	301.0	322.0	347.0	312.0	371.0
N109	chr1	161176095	161176433	TRUE	OK	156.1	0.0115	0.04859	0.6218	-0.412	-0.206	189.0	143.0	133.0	156.0	169.0	152.0
N110	chr1	161176508	161177422	TRUE	OK	13.7	0.0269	0.193	0.7549	0.566	0.283	13.0	6.0	9.0	21.0	12.0	22.0
N111	chr1	161176579	161176911	TRUE	OK	21.3	0.00672	0.9685	0.9926	0.014	0.007	23.0	19.0	13.0	21.0	23.0	30.0
N112	chr1	161176579	161177422	TRUE	OK	320.3	0.00477	0.0109	0.404	-0.347	-0.173	306.0	301.0	315.0	337.0	305.0	368.0
N113	chr1	161177106	161177422	TRUE	OK	12.6	0.0185	0.5176	0.8615	-0.265	-0.132	13.0	16.0	7.0	14.0	9.0	17.0

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000143224.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE