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Normalized Counts Table (ENSG00000139496.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr13	25301555	25301624	FALSE	LOW_COUNTS_INDEP_FILTER	9.1	0.107	0.5842	NA	NA	NA	8.9	6.3	9.1	17.9	10.8	1.9
E002	chr13	25301624	25301630	TRUE	OK	12.8	0.0413	0.3477	0.8067	0.487	0.243	12.8	9.4	12.1	20.8	15.7	5.8
E003	chr13	25301630	25301632	TRUE	OK	14.3	0.0617	0.2419	0.7728	0.693	0.346	12.8	9.4	13.1	24.8	19.6	5.8
E004	chr13	25301632	25301644	TRUE	OK	47.5	0.00459	0.01818	0.4766	0.480	0.240	48.3	32.3	47.3	59.6	49.9	47.4
E005	chr13	25301644	25301646	TRUE	OK	54.2	0.00562	0.06809	0.6596	0.359	0.179	64.1	33.4	55.4	64.5	52.9	55.1
E006	chr13	25301646	25301880	TRUE	OK	697.1	0.0247	0.2647	0.7807	0.226	0.113	863.7	382.7	830.0	757.5	610.1	738.7
E007	chr13	25302926	25303008	TRUE	OK	10.5	0.0377	0.2057	0.7599	0.601	0.300	13.8	4.2	9.1	8.9	9.8	17.4
E008	chr13	25303101	25303155	TRUE	OK	18.4	0.0399	0.1245	0.7198	0.616	0.308	26.6	9.4	11.1	16.9	20.6	26.1
E009	chr13	25307805	25307821	TRUE	OK	513.5	0.0321	0.1525	0.7358	0.345	0.172	625.1	247.1	595.3	551.0	467.1	595.6
E010	chr13	25307821	25307948	TRUE	OK	780.5	0.0269	0.1178	0.7142	0.351	0.176	940.7	398.3	894.4	833.0	748.2	868.2
E011	chr13	25307948	25307949	TRUE	OK	11.1	0.0414	0.8495	0.9631	-0.069	-0.034	15.8	10.4	10.1	14.9	11.8	3.9
E012	chr13	25307949	25308137	FALSE	LOW_COUNTS_INDEP_FILTER	3.8	0.0349	0.6958	NA	NA	NA	3.9	4.2	3.0	5.0	3.9	2.9
E013	chr13	25309246	25309282	TRUE	OK	517.1	0.0197	0.1266	0.7212	0.300	0.150	630.1	284.7	585.2	544.0	506.3	552.1
E014	chr13	25309282	25309429	FALSE	LOW_COUNTS_INDEP_FILTER	7.7	0.059	0.7139	NA	NA	NA	11.8	4.2	7.1	3.0	10.8	9.7
E015	chr13	25309959	25310015	FALSE	LOW_COUNTS_INDEP_FILTER	7.8	0.0229	0.725	NA	NA	NA	9.9	8.3	8.1	9.9	2.9	7.7
E016	chr13	25312882	25312942	TRUE	OK	581.0	0.0201	0.109	0.7068	0.319	0.160	700.1	318.0	657.7	590.7	610.1	609.1
E017	chr13	25312942	25312956	TRUE	OK	476.5	0.0221	0.1024	0.7001	0.343	0.172	553.2	251.3	557.0	481.5	526.9	489.2
E018	chr13	25312956	25313032	TRUE	OK	550.8	0.0184	0.09828	0.6967	0.320	0.160	654.7	306.6	626.5	563.9	570.9	582.0
E019	chr13	25313613	25313751	TRUE	OK	863.6	0.0181	0.1049	0.7024	0.308	0.154	1041.2	494.2	974.0	898.5	878.4	895.3
E020	chr13	25315356	25315467	TRUE	OK	820.9	0.0174	0.2514	0.7757	0.198	0.099	1016.6	491.1	961.9	855.8	769.7	830.5
E021	chr13	25317690	25317823	FALSE	LOW_COUNTS_INDEP_FILTER	7.6	0.0808	0.03095	NA	NA	NA	4.9	0.0	9.1	11.9	6.9	12.6
E022	chr13	25319325	25319350	TRUE	OK	683.3	0.0134	0.1838	0.7504	0.215	0.108	840.1	425.4	776.6	696.9	664.9	696.1
E023	chr13	25320272	25320529	TRUE	OK	10.9	0.0195	0.5601	0.8747	0.233	0.116	16.8	7.3	8.1	11.9	8.8	12.6
E024	chr13	25320529	25320595	TRUE	OK	660.8	0.0134	0.6069	0.8903	0.062	0.031	832.2	441.1	798.7	671.1	556.2	665.2
E025	chr13	25320918	25321093	TRUE	OK	977.0	0.00999	0.5968	0.8869	0.054	0.027	1219.7	680.9	1173.4	967.0	886.2	934.9
E026	chr13	25324988	25325054	TRUE	OK	646.3	0.0114	0.4469	0.8385	0.099	0.050	830.2	432.7	740.3	662.2	593.4	618.8
E027	chr13	25325054	25325068	TRUE	OK	483.6	0.0151	0.3576	0.8101	0.143	0.072	630.1	301.3	545.9	496.4	443.6	484.4
E028	chr13	25326915	25327034	TRUE	OK	689.0	0.0172	0.3219	0.7986	0.161	0.080	866.7	414.0	814.8	696.9	664.0	677.8
E029	chr13	25327429	25327512	TRUE	OK	593.0	0.011	0.4499	0.8396	0.097	0.049	725.7	396.2	717.1	566.9	557.2	594.6
E030	chr13	25331356	25331432	TRUE	OK	593.3	0.00952	0.3355	0.8026	0.129	0.064	702.0	402.5	717.1	569.9	563.1	605.2
E031	chr13	25331432	25331558	TRUE	OK	729.0	0.00635	0.1267	0.7213	0.188	0.094	830.2	510.9	857.1	736.6	720.7	718.4
E032	chr13	25331558	25336212	TRUE	OK	1115.4	0.00293	1.198e-05	0.006404	-0.422	-0.211	1385.3	1159.5	1445.4	1013.6	805.9	882.7
E033	chr13	25336212	25336309	TRUE	OK	41.9	0.0563	0.024	0.5194	-0.980	-0.490	41.4	77.2	55.4	36.7	14.7	26.1
E034	chr13	25336309	25336340	TRUE	OK	10.7	0.149	0.7974	0.9491	-0.229	-0.115	4.9	21.9	10.1	14.9	3.9	8.7
E035	chr13	25336340	25336344	FALSE	LOW_COUNTS_INDEP_FILTER	2.6	0.137	0.6824	NA	NA	NA	2.0	3.1	2.0	3.0	0.0	5.8
E036	chr13	25336935	25337034	TRUE	OK	570.5	0.00737	0.02719	0.5388	0.309	0.154	639.9	375.4	635.6	638.4	563.1	570.4
E037	chr13	25338635	25338731	TRUE	OK	606.3	0.00425	0.004148	0.2718	0.324	0.162	672.5	421.3	652.7	641.3	613.0	637.1
E038	chr13	25338731	25338878	TRUE	OK	15.8	0.0703	0.7797	0.9444	0.111	0.056	6.9	16.7	25.2	16.9	19.6	9.7
E039	chr13	25339964	25340718	TRUE	OK	1753.3	0.000844	0.1193	0.7155	0.087	0.043	1936.5	1519.2	2019.5	1708.6	1642.3	1693.9
E040	chr13	25340718	25342421	TRUE	OK	3379.1	0.0222	0.3744	0.8148	-0.194	-0.097	3620.6	4019.7	3598.8	3082.6	3025.0	2927.6
E041	chr13	25349561	25349800	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J042	chr13	25301880	25302926	FALSE	LOW_COUNTS_INDEP_FILTER	4.3	0.0733	0.2867	NA	NA	NA	3.0	2.1	5.0	3.0	2.9	9.7
J043	chr13	25301880	25303101	FALSE	LOW_COUNTS_INDEP_FILTER	6.4	0.0778	0.4944	NA	NA	NA	11.8	2.1	4.0	6.0	4.9	9.7
J044	chr13	25301880	25307805	TRUE	OK	458.4	0.0326	0.1655	0.7421	0.336	0.168	559.1	222.1	531.8	486.5	422.1	528.9
J045	chr13	25303008	25303101	FALSE	LOW_COUNTS_INDEP_FILTER	6.7	0.0215	0.1997	NA	NA	NA	9.9	2.1	5.0	6.9	6.9	9.7
J046	chr13	25303155	25307805	FALSE	LOW_COUNTS_INDEP_FILTER	8.0	0.0566	0.03329	NA	NA	NA	10.8	2.1	3.0	8.9	9.8	13.5
J047	chr13	25307948	25309246	TRUE	OK	426.3	0.0182	0.1115	0.7092	0.313	0.157	511.7	239.8	478.4	452.7	404.4	470.8
J048	chr13	25307948	25312882	FALSE	LOW_COUNTS_INDEP_FILTER	6.8	0.118	0.4589	NA	NA	NA	6.9	1.0	10.1	7.9	11.8	2.9
J049	chr13	25309282	25309959	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.185	0.9597	NA	NA	NA	1.0	1.0	0.0	2.0	0.0	0.0
J050	chr13	25309282	25312882	TRUE	OK	428.3	0.0192	0.1254	0.7205	0.301	0.151	517.7	236.7	486.5	440.8	431.9	456.3
J051	chr13	25310015	25312882	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0893	0.368	NA	NA	NA	2.0	0.0	3.0	0.0	1.0	1.0
J052	chr13	25313032	25313613	TRUE	OK	384.5	0.0164	0.1083	0.7059	0.303	0.152	462.4	221.1	429.1	382.2	392.7	419.6
J053	chr13	25313751	25315356	TRUE	OK	574.3	0.0153	0.1227	0.7182	0.275	0.137	698.1	339.9	643.6	607.6	565.0	591.7
J054	chr13	25315467	25317690	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J055	chr13	25315467	25319325	TRUE	OK	556.1	0.0146	0.1655	0.7421	0.238	0.119	681.3	336.8	629.5	583.8	529.8	575.3
J056	chr13	25319350	25320529	TRUE	OK	481.0	0.0141	0.566	0.8769	0.072	0.036	612.3	310.7	580.2	480.5	419.1	483.4
J057	chr13	25319350	25320918	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J058	chr13	25320595	25320918	TRUE	OK	557.7	0.0124	0.6849	0.9152	0.040	0.020	695.1	377.5	687.9	549.0	472.0	564.6
J059	chr13	25321093	25324988	TRUE	OK	464.5	0.00605	0.6535	0.9056	0.039	0.019	586.7	339.9	539.9	458.7	423.0	438.9
J060	chr13	25325068	25326915	TRUE	OK	447.5	0.0139	0.2878	0.7878	0.170	0.085	570.9	280.5	503.6	459.7	414.2	456.3
J061	chr13	25327034	25327429	TRUE	OK	383.2	0.0207	0.3229	0.7988	0.177	0.088	490.0	216.9	450.2	387.2	361.4	393.5
J062	chr13	25327512	25331356	TRUE	OK	421.5	0.00877	0.5206	0.8625	0.075	0.037	498.9	292.0	524.8	390.2	405.4	417.7
J063	chr13	25331558	25336212	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J064	chr13	25331558	25336935	TRUE	OK	373.8	0.0084	0.02659	0.5345	0.341	0.170	402.3	238.8	426.1	438.8	375.1	361.6
J065	chr13	25337034	25338635	TRUE	OK	363.8	0.00412	0.00283	0.2276	0.352	0.176	398.3	244.0	391.8	384.2	377.0	387.7
J066	chr13	25338731	25339964	TRUE	OK	391.2	0.00449	0.01109	0.4068	0.308	0.154	438.8	272.1	419.0	413.0	374.1	430.2
J067	chr13	25338731	25349561	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
N068	chr13	25331558	25338635	TRUE	OK	21.6	0.00581	0.5632	0.876	-0.169	-0.084	23.7	19.8	29.2	15.9	20.6	20.3

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000139496.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE