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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr1 | 45511035 | 45511050 | TRUE | OK | 75.5 | 0.00552 | 0.5667 | 0.8771 | 0.101 | 0.051 | 72.0 | 95.9 | 59.4 | 85.4 | 64.6 | 75.4 |
E002 | chr1 | 45511050 | 45511414 | TRUE | OK | 21108.1 | 0.00828 | 0.2306 | 0.7693 | -0.200 | -0.100 | 20330.5 | 28347.4 | 20013.5 | 20037.5 | 18052.0 | 19867.5 |
E003 | chr1 | 45514506 | 45514637 | TRUE | OK | 22661.3 | 0.00258 | 0.5473 | 0.8711 | -0.058 | -0.029 | 22367.6 | 27638.3 | 21470.0 | 22123.3 | 20230.9 | 22137.7 |
E004 | chr1 | 45514872 | 45514895 | TRUE | OK | 15802.1 | 0.00106 | 0.8975 | 0.9755 | -0.009 | -0.005 | 15839.2 | 18488.5 | 15008.6 | 15542.1 | 14157.4 | 15776.8 |
E005 | chr1 | 45514895 | 45514995 | TRUE | OK | 25639.7 | 0.00215 | 0.5679 | 0.8775 | 0.047 | 0.023 | 26346.2 | 28480.8 | 24291.2 | 25336.0 | 23061.1 | 26323.1 |
E006 | chr1 | 45515653 | 45515807 | TRUE | OK | 37148.7 | 0.00894 | 0.3355 | 0.8026 | 0.169 | 0.084 | 38936.5 | 37664.1 | 36377.9 | 37702.2 | 34360.0 | 37851.7 |
E007 | chr1 | 45518937 | 45518989 | TRUE | OK | 30787.4 | 0.00788 | 0.4789 | 0.8491 | 0.119 | 0.059 | 32439.7 | 30884.3 | 30608.5 | 31413.8 | 28208.2 | 31169.8 |
E008 | chr1 | 45518989 | 45519054 | TRUE | OK | 27005.1 | 0.00912 | 0.2166 | 0.7636 | 0.209 | 0.104 | 28268.9 | 25818.8 | 26637.0 | 28041.3 | 25440.7 | 27823.6 |
E009 | chr1 | 45521608 | 45521828 | TRUE | OK | 341.1 | 0.00151 | 1.225e-05 | 0.006518 | -0.399 | -0.200 | 369.8 | 449.4 | 382.7 | 303.8 | 260.5 | 280.4 |
E010 | chr1 | 45521828 | 45521854 | TRUE | OK | 17403.5 | 0.00646 | 0.2134 | 0.7627 | 0.175 | 0.088 | 18191.9 | 16693.9 | 17016.0 | 18286.2 | 16068.0 | 18164.9 |
E011 | chr1 | 45521854 | 45521857 | TRUE | OK | 11552.2 | 0.00583 | 0.2223 | 0.7657 | 0.163 | 0.081 | 12114.1 | 11050.7 | 11215.4 | 12149.8 | 10541.9 | 12241.1 |
E012 | chr1 | 45521857 | 45521867 | TRUE | OK | 6396.4 | 0.00457 | 0.07618 | 0.6726 | 0.208 | 0.104 | 6489.9 | 6068.6 | 6122.9 | 6597.1 | 6025.5 | 7074.3 |
E013 | chr1 | 45521867 | 45521884 | TRUE | OK | 2577.7 | 0.00628 | 0.086 | 0.6847 | 0.238 | 0.119 | 2610.0 | 2394.1 | 2412.3 | 2533.6 | 2471.7 | 3044.6 |
E014 | chr1 | 45521884 | 45521938 | TRUE | OK | 112.0 | 0.00714 | 0.9772 | 0.9944 | 0.017 | 0.009 | 121.3 | 113.7 | 111.8 | 112.2 | 84.2 | 128.6 |
E015 | chr1 | 45522777 | 45523047 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.8 | 0.125 | 0.5872 | NA | NA | NA | 5.9 | 12.5 | 8.1 | 6.0 | 1.0 | 13.5 |
J016 | chr1 | 45511414 | 45514506 | TRUE | OK | 13435.3 | 0.0048 | 0.2506 | 0.7755 | -0.146 | -0.073 | 13105.0 | 17608.4 | 12742.4 | 12791.1 | 11378.3 | 12986.6 |
J017 | chr1 | 45514637 | 45514872 | TRUE | OK | 14400.5 | 0.00116 | 0.7871 | 0.9462 | -0.019 | -0.009 | 14268.5 | 17090.2 | 13714.3 | 14108.5 | 12816.8 | 14404.9 |
J018 | chr1 | 45514895 | 45518989 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.113 | 0.4049 | NA | NA | NA | 2.0 | 5.2 | 8.1 | 6.0 | 1.0 | 1.9 |
J019 | chr1 | 45514995 | 45515653 | TRUE | OK | 16342.7 | 0.00437 | 0.1652 | 0.7419 | 0.159 | 0.080 | 17069.8 | 16704.4 | 15116.4 | 16435.6 | 14957.5 | 17772.4 |
J020 | chr1 | 45515807 | 45518937 | TRUE | OK | 28050.0 | 0.00629 | 0.5321 | 0.8661 | 0.094 | 0.047 | 29586.2 | 28419.3 | 27829.6 | 28396.8 | 25549.4 | 28518.8 |
J021 | chr1 | 45519054 | 45521608 | TRUE | OK | 78.2 | 0.0142 | 0.1247 | 0.7198 | -0.346 | -0.173 | 79.9 | 95.9 | 95.7 | 64.5 | 46.0 | 87.0 |
J022 | chr1 | 45519054 | 45521828 | TRUE | OK | 17170.0 | 0.00633 | 0.1884 | 0.7527 | 0.183 | 0.091 | 17932.5 | 16417.6 | 16743.1 | 18051.9 | 15875.1 | 17999.6 |
J023 | chr1 | 45519054 | 45521857 | TRUE | OK | 15.9 | 0.0358 | 0.591 | 0.885 | 0.247 | 0.123 | 13.8 | 10.4 | 21.2 | 20.8 | 9.8 | 19.3 |
J024 | chr1 | 45519054 | 45522777 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.8 | 0.129 | 0.5876 | NA | NA | NA | 5.9 | 12.5 | 8.1 | 6.0 | 1.0 | 13.5 |
N025 | chr1 | 45519047 | 45521828 | TRUE | OK | 59.0 | 0.0214 | 0.9726 | 0.9934 | 0.004 | 0.002 | 74.0 | 43.8 | 65.5 | 65.5 | 55.8 | 49.3 |
N026 | chr1 | 45519054 | 45521385 | TRUE | OK | 12.9 | 0.0372 | 0.6524 | 0.9052 | 0.213 | 0.107 | 17.7 | 10.4 | 9.1 | 7.9 | 13.7 | 18.4 |
N027 | chr1 | 45519054 | 45521634 | TRUE | OK | 48.2 | 0.00557 | 0.7356 | 0.9313 | -0.076 | -0.038 | 53.2 | 63.6 | 37.3 | 49.6 | 46.0 | 39.6 |
N028 | chr1 | 45519054 | 45521638 | TRUE | OK | 30.3 | 0.00476 | 0.002387 | 0.2102 | -0.749 | -0.375 | 43.4 | 37.5 | 36.3 | 22.8 | 22.5 | 19.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000117450.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |