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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr2 | 65070695 | 65070700 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.1 | 0.426 | 0.3834 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 1.0 | 0.0 | 3.9 |
E002 | chr2 | 65070700 | 65071204 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.1 | 0.042 | 0.007768 | NA | NA | NA | 3.0 | 0.0 | 3.0 | 5.0 | 4.9 | 8.7 |
E003 | chr2 | 65085508 | 65085639 | TRUE | OK | 54.0 | 0.0239 | 3.776e-06 | 0.002522 | 1.420 | 0.710 | 40.4 | 18.8 | 42.3 | 85.4 | 57.8 | 79.3 |
E004 | chr2 | 65086853 | 65086854 | TRUE | OK | 23.7 | 0.0153 | 0.01727 | 0.4702 | 0.751 | 0.375 | 12.8 | 28.2 | 19.1 | 28.8 | 28.4 | 25.1 |
E005 | chr2 | 65086854 | 65087870 | TRUE | OK | 1266.7 | 0.00214 | 0.8342 | 0.959 | -0.020 | -0.010 | 1314.3 | 1497.3 | 1392.0 | 1164.5 | 1090.9 | 1140.9 |
E006 | chr2 | 65087870 | 65088368 | TRUE | OK | 4456.0 | 0.00581 | 0.217 | 0.7636 | -0.161 | -0.081 | 4835.4 | 5690.1 | 4709.8 | 4121.1 | 3482.3 | 3897.3 |
E007 | chr2 | 65088368 | 65088690 | TRUE | OK | 5535.6 | 0.000817 | 0.2325 | 0.7701 | -0.063 | -0.031 | 6180.3 | 6273.0 | 6044.3 | 5139.7 | 4684.9 | 4891.2 |
E008 | chr2 | 65088938 | 65089070 | TRUE | OK | 4572.7 | 0.00136 | 0.9831 | 0.9958 | -0.003 | -0.001 | 5250.5 | 4816.3 | 5028.1 | 4270.0 | 3878.9 | 4192.2 |
E009 | chr2 | 65090982 | 65091078 | TRUE | OK | 4281.6 | 0.00463 | 0.5487 | 0.8716 | 0.067 | 0.034 | 5066.1 | 4188.6 | 4652.4 | 4136.0 | 3561.6 | 4084.9 |
E010 | chr2 | 65097970 | 65098066 | TRUE | OK | 4536.6 | 0.00979 | 0.1983 | 0.7569 | 0.210 | 0.105 | 5427.0 | 4067.6 | 4765.2 | 4601.6 | 3808.4 | 4549.9 |
E011 | chr2 | 65104733 | 65104806 | TRUE | OK | 4326.3 | 0.00881 | 0.3114 | 0.7948 | 0.159 | 0.079 | 5125.3 | 3962.3 | 4665.5 | 4368.3 | 3521.5 | 4315.0 |
E012 | chr2 | 65129892 | 65130086 | TRUE | OK | 4040.2 | 0.00534 | 0.3295 | 0.8009 | 0.121 | 0.061 | 4684.5 | 3868.5 | 4396.5 | 4049.6 | 3305.1 | 3937.0 |
E013 | chr2 | 65130086 | 65130101 | TRUE | OK | 1019.1 | 0.0039 | 0.633 | 0.8986 | 0.058 | 0.029 | 1139.8 | 1010.4 | 1154.3 | 1038.5 | 785.4 | 986.2 |
E014 | chr2 | 65130101 | 65130104 | TRUE | OK | 247.0 | 0.00423 | 0.5568 | 0.8738 | 0.073 | 0.036 | 281.0 | 225.2 | 290.1 | 239.3 | 217.4 | 229.1 |
E015 | chr2 | 65130104 | 65130105 | TRUE | OK | 238.4 | 0.00456 | 0.5187 | 0.8619 | 0.083 | 0.041 | 270.2 | 214.8 | 281.0 | 232.3 | 208.6 | 223.3 |
E016 | chr2 | 65130105 | 65130106 | TRUE | OK | 234.9 | 0.00413 | 0.4172 | 0.8293 | 0.103 | 0.051 | 261.3 | 212.7 | 276.0 | 231.3 | 206.6 | 221.4 |
E017 | chr2 | 65130106 | 65130331 | TRUE | OK | 209.8 | 0.00398 | 0.5354 | 0.8672 | 0.078 | 0.039 | 240.6 | 190.8 | 243.7 | 202.5 | 183.1 | 198.2 |
J018 | chr2 | 65071204 | 65085508 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.555 | 0.495 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J019 | chr2 | 65071204 | 65104733 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.257 | 0.1965 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 1.0 |
J020 | chr2 | 65085639 | 65088368 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.555 | 0.495 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 | 0.0 |
J021 | chr2 | 65088690 | 65088938 | TRUE | OK | 2342.4 | 0.000408 | 0.09074 | 0.6895 | -0.073 | -0.037 | 2637.6 | 2612.0 | 2628.9 | 2143.4 | 1978.1 | 2054.5 |
J022 | chr2 | 65088690 | 65097970 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.0748 | 0.636 | NA | NA | NA | 3.0 | 11.5 | 11.1 | 8.9 | 2.9 | 4.8 |
J023 | chr2 | 65089070 | 65090982 | TRUE | OK | 2844.5 | 0.00173 | 0.745 | 0.934 | 0.023 | 0.011 | 3311.0 | 2943.6 | 3074.0 | 2658.7 | 2372.8 | 2707.1 |
J024 | chr2 | 65089070 | 65104733 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.5 | 0.0121 | 0.0003188 | NA | NA | NA | 12.8 | 14.6 | 14.1 | 2.0 | 4.9 | 2.9 |
J025 | chr2 | 65091078 | 65097970 | TRUE | OK | 3038.7 | 0.00912 | 0.3976 | 0.8231 | 0.130 | 0.065 | 3684.7 | 2715.2 | 3292.6 | 3026.0 | 2493.2 | 3020.4 |
J026 | chr2 | 65091078 | 65104733 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0225 | 0.8141 | NA | NA | NA | 10.8 | 7.3 | 6.0 | 4.0 | 6.9 | 10.6 |
J027 | chr2 | 65098066 | 65104733 | TRUE | OK | 3064.2 | 0.0108 | 0.1602 | 0.739 | 0.240 | 0.120 | 3676.8 | 2648.5 | 3166.7 | 3179.9 | 2535.4 | 3178.0 |
J028 | chr2 | 65104806 | 65129892 | TRUE | OK | 3039.0 | 0.00587 | 0.2889 | 0.7881 | 0.139 | 0.069 | 3566.4 | 2877.9 | 3228.1 | 3039.9 | 2457.0 | 3064.9 |
N029 | chr2 | 65069801 | 65071453 | TRUE | OK | 42.0 | 0.0041 | 9.416e-06 | 0.005253 | 0.940 | 0.470 | 31.6 | 27.1 | 39.3 | 49.6 | 52.9 | 51.2 |
N030 | chr2 | 65072980 | 65074281 | TRUE | OK | 66.9 | 0.00236 | 0.0003666 | 0.07334 | 0.589 | 0.295 | 61.1 | 59.4 | 59.4 | 82.4 | 69.5 | 69.6 |
N031 | chr2 | 65074404 | 65077867 | TRUE | OK | 53.2 | 0.0216 | 0.00764 | 0.3533 | 0.776 | 0.388 | 51.3 | 28.2 | 53.4 | 75.5 | 60.7 | 50.3 |
N032 | chr2 | 65077964 | 65082535 | TRUE | OK | 50.2 | 0.0238 | 0.0001428 | 0.03957 | 1.159 | 0.580 | 46.3 | 21.9 | 38.3 | 61.6 | 75.4 | 58.0 |
N033 | chr2 | 65082709 | 65083638 | TRUE | OK | 49.3 | 0.00302 | 5.263e-14 | 2.759e-10 | 1.486 | 0.743 | 33.5 | 26.1 | 30.2 | 70.5 | 67.6 | 67.7 |
N034 | chr2 | 65089070 | 65097970 | TRUE | OK | 28.8 | 0.00461 | 0.7628 | 0.9392 | -0.076 | -0.038 | 32.5 | 34.4 | 30.2 | 26.8 | 27.4 | 21.3 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000138069.18 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |