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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr13 | 76992597 | 76992951 | TRUE | OK | 15.9 | 0.0349 | 0.5199 | 0.8623 | 0.290 | 0.145 | 14.8 | 15.6 | 8.1 | 10.9 | 25.5 | 20.3 |
E002 | chr13 | 76999136 | 77002049 | TRUE | OK | 1826.7 | 0.0017 | 1.055e-13 | 5.241e-10 | -0.562 | -0.281 | 1951.3 | 2037.5 | 1793.9 | 1755.3 | 1648.1 | 1774.1 |
E003 | chr13 | 77005259 | 77007564 | TRUE | OK | 4177.7 | 0.00416 | 0.009638 | 0.3872 | 0.285 | 0.142 | 3570.3 | 3861.2 | 3338.9 | 4755.5 | 4663.3 | 4876.7 |
E004 | chr13 | 77007564 | 77007788 | TRUE | OK | 731.7 | 0.00725 | 0.01967 | 0.4889 | 0.341 | 0.171 | 668.5 | 495.3 | 593.3 | 839.9 | 916.6 | 876.9 |
E005 | chr13 | 77015164 | 77015408 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.6 | 0.0356 | 0.8846 | NA | NA | NA | 10.8 | 6.3 | 3.0 | 8.9 | 10.8 | 5.8 |
E006 | chr13 | 77015408 | 77015510 | TRUE | OK | 511.7 | 0.0053 | 0.2548 | 0.7774 | 0.145 | 0.073 | 501.9 | 376.4 | 440.2 | 597.7 | 571.9 | 582.0 |
E007 | chr13 | 77015510 | 77015580 | TRUE | OK | 503.6 | 0.00651 | 0.202 | 0.7586 | 0.178 | 0.089 | 484.1 | 356.6 | 441.2 | 589.7 | 563.1 | 586.9 |
E008 | chr13 | 77015580 | 77015581 | TRUE | OK | 9.7 | 0.0507 | 0.3695 | 0.8134 | 0.539 | 0.269 | 7.9 | 6.3 | 7.1 | 9.9 | 20.6 | 6.8 |
E009 | chr13 | 77018599 | 77018686 | TRUE | OK | 521.9 | 0.00814 | 0.2685 | 0.7818 | 0.167 | 0.084 | 505.8 | 362.9 | 465.3 | 584.8 | 605.2 | 607.2 |
E010 | chr13 | 77018686 | 77018722 | TRUE | OK | 493.8 | 0.00878 | 0.1519 | 0.7355 | 0.227 | 0.113 | 471.3 | 330.5 | 432.1 | 579.8 | 560.1 | 588.8 |
E011 | chr13 | 77018722 | 77018744 | TRUE | OK | 18.4 | 0.0336 | 0.5902 | 0.8847 | 0.235 | 0.117 | 9.9 | 15.6 | 20.1 | 28.8 | 22.5 | 13.5 |
E012 | chr13 | 77021512 | 77021656 | TRUE | OK | 571.6 | 0.00921 | 0.1202 | 0.7161 | 0.252 | 0.126 | 510.8 | 382.7 | 522.7 | 660.2 | 653.2 | 700.0 |
E013 | chr13 | 77021656 | 77021861 | TRUE | OK | 748.4 | 0.0083 | 0.2934 | 0.7896 | 0.160 | 0.080 | 690.2 | 531.8 | 700.0 | 897.5 | 865.7 | 805.4 |
E014 | chr13 | 77026826 | 77027085 | TRUE | OK | 792.7 | 0.021 | 0.8623 | 0.9664 | 0.047 | 0.024 | 806.6 | 556.8 | 755.4 | 1025.6 | 935.2 | 676.8 |
E015 | chr13 | 77027085 | 77027159 | TRUE | OK | 402.4 | 0.0202 | 0.8178 | 0.9546 | 0.064 | 0.032 | 385.5 | 280.5 | 401.9 | 543.1 | 459.3 | 344.2 |
E016 | chr13 | 77027159 | 77027195 | TRUE | OK | 26.9 | 0.0171 | 0.3129 | 0.7952 | 0.314 | 0.157 | 25.6 | 12.5 | 26.2 | 37.7 | 27.4 | 31.9 |
J017 | chr13 | 76992951 | 77015408 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.2 | 0.139 | 0.1738 | NA | NA | NA | 2.0 | 6.3 | 1.0 | 0.0 | 2.0 | 1.9 |
J018 | chr13 | 77002049 | 77015408 | TRUE | OK | 15.4 | 0.00721 | 0.7633 | 0.9393 | -0.101 | -0.051 | 17.7 | 13.6 | 12.1 | 16.9 | 14.7 | 17.4 |
J019 | chr13 | 77007788 | 77015408 | TRUE | OK | 284.9 | 0.00673 | 0.5745 | 0.8797 | 0.080 | 0.040 | 285.9 | 204.4 | 260.9 | 335.6 | 320.2 | 302.6 |
J020 | chr13 | 77015580 | 77018599 | TRUE | OK | 390.7 | 0.00491 | 0.1027 | 0.7007 | 0.211 | 0.106 | 355.9 | 277.4 | 347.5 | 449.7 | 447.5 | 466.0 |
J021 | chr13 | 77015580 | 77026826 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.565 | 0.6605 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
J022 | chr13 | 77018722 | 77021512 | TRUE | OK | 302.1 | 0.00842 | 0.03304 | 0.5654 | 0.351 | 0.175 | 265.2 | 190.8 | 260.9 | 351.4 | 359.4 | 384.8 |
J023 | chr13 | 77018722 | 77021656 | TRUE | OK | 16.5 | 0.013 | 0.5447 | 0.8701 | 0.208 | 0.104 | 15.8 | 7.3 | 18.1 | 21.8 | 16.6 | 19.3 |
J024 | chr13 | 77021861 | 77026826 | TRUE | OK | 250.0 | 0.0161 | 0.7896 | 0.947 | 0.063 | 0.032 | 263.3 | 180.4 | 219.6 | 309.8 | 311.4 | 215.6 |
N025 | chr13 | 76992271 | 76995062 | TRUE | OK | 347.6 | 0.00721 | 0.0287 | 0.5463 | -0.339 | -0.169 | 382.6 | 312.8 | 365.6 | 314.7 | 317.3 | 392.5 |
N026 | chr13 | 76995228 | 76995901 | TRUE | OK | 260.1 | 0.00121 | 8.03e-05 | 0.02677 | -0.372 | -0.186 | 287.9 | 269.0 | 246.8 | 252.2 | 242.9 | 262.0 |
N027 | chr13 | 76996127 | 76998042 | TRUE | OK | 20.6 | 0.0225 | 0.1189 | 0.7151 | -0.551 | -0.275 | 25.6 | 17.7 | 24.2 | 25.8 | 19.6 | 10.6 |
N028 | chr13 | 76996127 | 77000457 | TRUE | OK | 217.4 | 0.00333 | 0.04381 | 0.6068 | -0.255 | -0.127 | 242.6 | 196.0 | 207.5 | 226.4 | 197.8 | 234.0 |
N029 | chr13 | 76998085 | 77000457 | TRUE | OK | 19.3 | 0.00613 | 0.2151 | 0.7632 | -0.369 | -0.185 | 20.7 | 19.8 | 19.1 | 20.8 | 20.6 | 14.5 |
N030 | chr13 | 77001959 | 77015408 | TRUE | OK | 11.2 | 0.0132 | 0.01317 | 0.4283 | 1.048 | 0.524 | 5.9 | 8.3 | 5.0 | 10.9 | 17.6 | 19.3 |
N031 | chr13 | 77018722 | 77026826 | TRUE | OK | 58.5 | 0.00792 | 0.5912 | 0.8851 | 0.111 | 0.055 | 62.1 | 37.5 | 52.4 | 74.5 | 60.7 | 63.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000005812.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |