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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr9 | 73151864 | 73151901 | TRUE | OK | 2664.4 | 0.00936 | 0.05864 | 0.6451 | 0.311 | 0.155 | 2592.2 | 2114.6 | 2382.1 | 3059.8 | 2678.3 | 3159.6 |
E002 | chr9 | 73151901 | 73151924 | TRUE | OK | 3057.6 | 0.00893 | 0.0573 | 0.6423 | 0.305 | 0.153 | 2959.0 | 2450.4 | 2750.7 | 3488.7 | 3084.7 | 3612.1 |
E003 | chr9 | 73154197 | 73154340 | TRUE | OK | 42.9 | 0.00502 | 3.886e-05 | 0.01549 | 0.910 | 0.455 | 29.6 | 29.2 | 29.2 | 65.5 | 49.9 | 54.1 |
E004 | chr9 | 73154340 | 73154342 | TRUE | OK | 16.0 | 0.0102 | 0.04861 | 0.6218 | 0.678 | 0.339 | 9.9 | 12.5 | 14.1 | 19.9 | 21.5 | 18.4 |
E005 | chr9 | 73157653 | 73158521 | TRUE | OK | 97.8 | 0.0414 | 0.734 | 0.9308 | -0.045 | -0.023 | 102.5 | 98.0 | 93.7 | 103.3 | 136.1 | 53.2 |
E006 | chr9 | 73158521 | 73158601 | TRUE | OK | 6632.3 | 0.00552 | 0.1541 | 0.7363 | 0.182 | 0.091 | 6476.1 | 5912.2 | 6200.5 | 7298.0 | 6721.8 | 7185.5 |
E007 | chr9 | 73158694 | 73158803 | TRUE | OK | 9661.0 | 0.00598 | 0.1221 | 0.7178 | 0.206 | 0.103 | 9304.0 | 8614.9 | 9103.3 | 10703.3 | 9879.0 | 10361.6 |
E008 | chr9 | 73159328 | 73159423 | TRUE | OK | 12491.4 | 0.00649 | 0.6861 | 0.9155 | 0.062 | 0.031 | 12639.6 | 11725.4 | 12064.5 | 13541.6 | 12037.3 | 12940.1 |
E009 | chr9 | 73159423 | 73159879 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.0506 | 0.6722 | NA | NA | NA | 8.9 | 5.2 | 4.0 | 8.9 | 2.9 | 10.6 |
E010 | chr9 | 73160262 | 73160284 | TRUE | OK | 9407.9 | 0.00595 | 0.8032 | 0.9508 | 0.039 | 0.020 | 9633.3 | 8863.1 | 9072.1 | 10289.3 | 8902.6 | 9686.7 |
E011 | chr9 | 73160284 | 73160338 | TRUE | OK | 9753.5 | 0.00544 | 0.7728 | 0.9421 | 0.044 | 0.022 | 9859.1 | 9271.9 | 9420.6 | 10690.4 | 9152.3 | 10126.6 |
E012 | chr9 | 73160338 | 73160376 | TRUE | OK | 8534.9 | 0.00406 | 0.4662 | 0.8448 | 0.084 | 0.042 | 8499.4 | 8155.1 | 8029.6 | 9379.9 | 8169.2 | 8976.1 |
E013 | chr9 | 73160802 | 73160893 | TRUE | OK | 10736.7 | 0.00306 | 0.1754 | 0.7466 | 0.131 | 0.066 | 10468.5 | 10375.1 | 9865.7 | 11741.7 | 10554.7 | 11414.5 |
E014 | chr9 | 73162781 | 73162861 | TRUE | OK | 9862.7 | 0.00143 | 0.03556 | 0.5768 | 0.138 | 0.069 | 9206.4 | 9858.9 | 9062.0 | 10513.6 | 9870.2 | 10665.2 |
E015 | chr9 | 73163475 | 73163500 | TRUE | OK | 8175.6 | 0.00109 | 0.1491 | 0.7343 | 0.083 | 0.042 | 7612.0 | 8558.6 | 7476.6 | 8597.6 | 7952.7 | 8856.2 |
E016 | chr9 | 73163500 | 73163532 | TRUE | OK | 8493.9 | 0.000857 | 0.06955 | 0.6618 | 0.092 | 0.046 | 7867.4 | 8909.0 | 7733.5 | 8920.2 | 8413.0 | 9120.2 |
E017 | chr9 | 73165115 | 73165209 | TRUE | OK | 11694.3 | 0.00066 | 0.5441 | 0.8701 | 0.027 | 0.014 | 11022.6 | 12588.8 | 10789.4 | 12350.3 | 11166.7 | 12247.9 |
E018 | chr9 | 73165209 | 73165544 | TRUE | OK | 42.8 | 0.0113 | 0.02864 | 0.546 | 0.562 | 0.281 | 33.5 | 38.6 | 30.2 | 38.7 | 57.8 | 58.0 |
E019 | chr9 | 73166096 | 73166192 | TRUE | OK | 11558.0 | 0.00161 | 0.4994 | 0.8555 | -0.047 | -0.023 | 11060.1 | 13000.6 | 10586.9 | 12339.4 | 10573.3 | 11787.7 |
E020 | chr9 | 73167496 | 73167555 | TRUE | OK | 10483.5 | 0.00294 | 0.3807 | 0.8172 | -0.084 | -0.042 | 10058.3 | 12234.2 | 9452.8 | 11055.7 | 9399.1 | 10700.9 |
E021 | chr9 | 73167555 | 73167869 | TRUE | OK | 196.4 | 0.013 | 0.572 | 0.8789 | 0.119 | 0.060 | 215.9 | 180.4 | 161.2 | 192.6 | 242.9 | 185.6 |
E022 | chr9 | 73168097 | 73169031 | TRUE | OK | 241.3 | 0.0257 | 0.2614 | 0.7793 | 0.354 | 0.177 | 199.2 | 208.5 | 219.6 | 183.7 | 296.7 | 340.3 |
E023 | chr9 | 73169031 | 73169154 | TRUE | OK | 11388.2 | 0.00622 | 0.2486 | 0.7751 | -0.163 | -0.082 | 10729.7 | 14192.5 | 10228.3 | 11812.2 | 9895.6 | 11470.6 |
E024 | chr9 | 73170050 | 73170393 | TRUE | OK | 10962.3 | 0.00704 | 0.2906 | 0.7888 | -0.166 | -0.083 | 10132.2 | 13992.3 | 9753.9 | 11208.6 | 9866.2 | 10820.8 |
J025 | chr9 | 73151924 | 73154197 | TRUE | OK | 11.6 | 0.0111 | 0.009557 | 0.3862 | 1.043 | 0.522 | 7.9 | 9.4 | 5.0 | 20.8 | 11.8 | 14.5 |
J026 | chr9 | 73151924 | 73158521 | TRUE | OK | 3001.4 | 0.00885 | 0.05169 | 0.6295 | 0.311 | 0.155 | 2905.8 | 2401.4 | 2685.3 | 3424.1 | 3035.8 | 3556.0 |
J027 | chr9 | 73154340 | 73158521 | TRUE | OK | 19.8 | 0.00704 | 0.01299 | 0.4262 | 0.759 | 0.379 | 18.7 | 13.6 | 11.1 | 29.8 | 23.5 | 22.2 |
J028 | chr9 | 73154342 | 73158521 | TRUE | OK | 10.2 | 0.0114 | 0.1028 | 0.7007 | 0.680 | 0.340 | 6.9 | 5.2 | 11.1 | 12.9 | 11.8 | 13.5 |
J029 | chr9 | 73158601 | 73158694 | TRUE | OK | 6471.9 | 0.00538 | 0.1556 | 0.7371 | 0.179 | 0.090 | 6342.0 | 5767.3 | 6041.3 | 7117.3 | 6530.8 | 7032.8 |
J030 | chr9 | 73158803 | 73159328 | TRUE | OK | 7669.7 | 0.0055 | 0.1603 | 0.7391 | 0.179 | 0.090 | 7432.5 | 6866.3 | 7251.0 | 8313.6 | 7803.9 | 8350.6 |
J031 | chr9 | 73159423 | 73160262 | TRUE | OK | 8179.3 | 0.0064 | 0.8589 | 0.9656 | 0.031 | 0.015 | 8443.2 | 7632.7 | 7939.9 | 8954.0 | 7625.7 | 8480.1 |
J032 | chr9 | 73160376 | 73160802 | TRUE | OK | 7046.2 | 0.00264 | 0.1705 | 0.7443 | 0.124 | 0.062 | 6882.3 | 6762.0 | 6470.4 | 7733.8 | 6886.3 | 7542.3 |
J033 | chr9 | 73160893 | 73162781 | TRUE | OK | 7149.8 | 0.00281 | 0.02801 | 0.5426 | 0.201 | 0.100 | 6820.2 | 6695.3 | 6423.1 | 7828.1 | 7217.3 | 7914.5 |
J034 | chr9 | 73162861 | 73163475 | TRUE | OK | 6893.1 | 0.000883 | 0.0802 | 0.6774 | 0.092 | 0.046 | 6368.6 | 7186.4 | 6314.3 | 7233.5 | 6756.1 | 7499.8 |
J035 | chr9 | 73163532 | 73165115 | TRUE | OK | 7140.1 | 0.000967 | 0.1307 | 0.7238 | 0.081 | 0.040 | 6462.3 | 7631.7 | 6559.0 | 7456.8 | 6992.1 | 7738.6 |
J036 | chr9 | 73165209 | 73166096 | TRUE | OK | 7857.1 | 0.000845 | 0.8653 | 0.9672 | -0.007 | -0.003 | 7604.1 | 8478.4 | 7236.9 | 8412.9 | 7280.0 | 8130.1 |
J037 | chr9 | 73166192 | 73167496 | TRUE | OK | 8321.0 | 0.00225 | 0.5426 | 0.8696 | -0.051 | -0.025 | 7919.6 | 9556.5 | 7527.0 | 8862.6 | 7457.2 | 8602.9 |
J038 | chr9 | 73167555 | 73169031 | TRUE | OK | 7217.4 | 0.00383 | 0.2575 | 0.7782 | -0.122 | -0.061 | 6998.7 | 8653.5 | 6488.5 | 7548.2 | 6218.4 | 7397.3 |
J039 | chr9 | 73169154 | 73170050 | TRUE | OK | 7357.3 | 0.00731 | 0.3759 | 0.8153 | -0.144 | -0.072 | 6703.9 | 9489.8 | 6514.7 | 7470.7 | 6427.0 | 7537.5 |
N040 | chr9 | 73151924 | 73154460 | TRUE | OK | 29.7 | 0.00727 | 0.6051 | 0.8896 | -0.131 | -0.065 | 28.6 | 26.1 | 37.3 | 25.8 | 29.4 | 30.9 |
N041 | chr9 | 73154581 | 73158521 | TRUE | OK | 45.1 | 0.00545 | 0.4846 | 0.851 | 0.151 | 0.075 | 35.5 | 45.9 | 45.3 | 39.7 | 52.9 | 51.2 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000135046.14 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |