Normalized Counts Table (ENSG00000065534.18)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr3	123610048	123612297	TRUE	OK	28.6	0.00672	3.916e-05	0.01559	-1.080	-0.540	37.5	29.2	33.2	27.8	21.5	22.2
E002	chr3	123612297	123612309	TRUE	OK	11.3	0.0142	0.002429	0.2119	-1.228	-0.614	14.8	13.6	13.1	6.9	7.8	11.6
E003	chr3	123612309	123613339	TRUE	OK	138.3	0.012	0.01233	0.4186	-0.516	-0.258	125.2	141.8	130.9	135.0	145.9	150.8
E004	chr3	123613339	123614028	TRUE	OK	112.9	0.0118	0.7497	0.9352	0.059	0.029	116.3	71.9	78.6	129.1	149.8	131.5
E005	chr3	123614028	123614044	TRUE	OK	28.5	0.0218	0.566	0.8769	0.165	0.082	31.6	11.5	21.2	30.8	43.1	32.9
E006	chr3	123614044	123614063	TRUE	OK	27.5	0.0131	0.7408	0.9329	0.079	0.040	29.6	11.5	23.2	30.8	39.2	30.9
E007	chr3	123614063	123614104	TRUE	OK	31.1	0.0167	0.4698	0.846	0.195	0.098	32.5	11.5	25.2	33.8	45.0	38.7
E008	chr3	123614104	123614349	TRUE	OK	58.7	0.00542	0.8749	0.9696	0.033	0.017	49.3	38.6	52.4	58.6	70.5	83.1
E009	chr3	123616351	123618638	FALSE	LOW_COUNTS_INDEP_FILTER	6.9	0.0849	0.4554	NA	NA	NA	4.9	2.1	14.1	5.0	5.9	9.7
E010	chr3	123618638	123618767	TRUE	OK	52.8	0.00975	0.4287	0.8326	-0.175	-0.087	41.4	42.8	52.4	56.6	48.0	75.4
E011	chr3	123618767	123618770	TRUE	OK	28.0	0.00678	0.209	0.761	-0.329	-0.165	24.7	26.1	26.2	30.8	27.4	32.9
E012	chr3	123620206	123620336	TRUE	OK	50.5	0.0153	0.5954	0.8864	-0.133	-0.067	32.5	48.0	48.3	60.6	49.9	63.8
E013	chr3	123620336	123620496	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.523	0.2806	NA	NA	NA	0.0	4.2	2.0	0.0	0.0	2.9
E014	chr3	123620496	123620514	FALSE	LOW_COUNTS_INDEP_FILTER	0.8	0.836	0.6599	NA	NA	NA	0.0	3.1	0.0	0.0	0.0	1.9
E015	chr3	123620514	123620626	FALSE	LOW_COUNTS_INDEP_FILTER	1.7	0.306	0.6169	NA	NA	NA	0.0	3.1	0.0	1.0	3.9	1.9
E016	chr3	123620626	123624078	TRUE	OK	12.9	0.0139	0.2957	0.7904	-0.395	-0.197	11.8	14.6	10.1	14.9	11.8	14.5
E017	chr3	123624078	123625316	FALSE	LOW_COUNTS_INDEP_FILTER	2.5	0.123	0.7766	NA	NA	NA	1.0	2.1	2.0	1.0	2.0	6.8
E018	chr3	123626817	123626941	TRUE	OK	48.0	0.0216	0.9683	0.9926	0.013	0.006	26.6	42.8	46.3	54.6	64.6	53.2
E019	chr3	123629473	123629626	TRUE	OK	82.4	0.0268	0.4881	0.8522	-0.204	-0.102	61.1	88.6	65.5	97.3	97.9	84.1
E020	chr3	123638070	123638194	TRUE	OK	52.8	0.00469	0.2576	0.7782	0.235	0.117	41.4	35.5	39.3	74.5	60.7	65.7
E021	chr3	123640286	123640378	TRUE	OK	45.2	0.00481	0.2952	0.7901	-0.227	-0.113	44.4	32.3	42.3	56.6	45.0	50.3
E022	chr3	123640378	123640504	TRUE	OK	57.1	0.00408	0.7663	0.9401	0.054	0.027	50.3	34.4	50.4	74.5	61.7	71.5
E023	chr3	123646959	123647223	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.054	0.8161	NA	NA	NA	2.0	4.2	2.0	2.0	2.9	5.8
E024	chr3	123647223	123647427	TRUE	OK	69.3	0.00464	0.8284	0.9573	-0.043	-0.021	70.0	48.0	52.4	77.4	82.3	86.0
E025	chr3	123648970	123649064	TRUE	OK	49.1	0.00403	0.8864	0.9727	-0.031	-0.016	43.4	33.4	43.3	58.6	56.8	59.0
E026	chr3	123649161	123649194	TRUE	OK	34.0	0.00552	0.9302	0.9836	0.016	0.008	28.6	19.8	33.2	38.7	41.1	42.5
E027	chr3	123657125	123657428	TRUE	OK	54.0	0.0159	0.3743	0.8148	0.196	0.098	47.3	18.8	54.4	66.5	66.6	70.6
E028	chr3	123664104	123664258	TRUE	OK	44.3	0.00712	0.9745	0.9938	-0.021	-0.011	36.5	22.9	48.3	57.6	51.9	48.3
E029	chr3	123666218	123666242	TRUE	OK	30.8	0.0231	0.7072	0.9221	-0.144	-0.072	22.7	17.7	38.3	45.7	32.3	28.0
E030	chr3	123666242	123666346	TRUE	OK	38.5	0.0238	0.4055	0.8255	-0.309	-0.154	32.5	19.8	52.4	50.6	33.3	42.5
E031	chr3	123666918	123667136	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E032	chr3	123667136	123667187	TRUE	OK	34.4	0.0262	0.7802	0.9445	-0.078	-0.039	31.6	19.8	34.2	52.6	23.5	44.5
E033	chr3	123681029	123682223	FALSE	LOW_COUNTS_INDEP_FILTER	4.1	0.376	0.4154	NA	NA	NA	2.0	0.0	3.0	6.0	0.0	13.5
E034	chr3	123682223	123682310	TRUE	OK	32.9	0.044	0.7475	0.9346	-0.069	-0.034	29.6	20.9	31.2	47.7	17.6	50.3
E035	chr3	123692282	123692379	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
E036	chr3	123692734	123692851	TRUE	OK	34.3	0.0173	0.2953	0.7901	0.347	0.173	24.7	21.9	25.2	41.7	31.3	60.9
E037	chr3	123693498	123693615	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.395	0.7865	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	1.0
E038	chr3	123698808	123698974	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.256	0.8458	NA	NA	NA	1.0	0.0	0.0	1.0	1.0	0.0
E039	chr3	123700019	123701005	TRUE	OK	160.8	0.00822	0.0857	0.6844	0.300	0.150	123.3	78.2	147.1	191.6	189.0	235.9
E040	chr3	123701437	123701457	TRUE	OK	28.2	0.00689	0.6043	0.8894	0.134	0.067	23.7	14.6	26.2	31.8	32.3	40.6
E041	chr3	123701457	123701509	TRUE	OK	32.5	0.00666	0.311	0.7947	0.256	0.128	27.6	16.7	26.2	41.7	34.3	48.3
E042	chr3	123707753	123708003	TRUE	OK	68.3	0.00428	0.009421	0.3841	0.488	0.244	54.2	33.4	47.3	89.4	82.3	103.5
E043	chr3	123708697	123708895	TRUE	OK	56.9	0.00404	0.298	0.7912	0.198	0.099	46.3	30.2	50.4	72.5	71.5	70.6
E044	chr3	123709157	123709755	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.508	0.3838	NA	NA	NA	0.0	1.0	0.0	0.0	5.9	1.0
E045	chr3	123709755	123709893	TRUE	OK	51.1	0.00486	0.2186	0.7644	-0.257	-0.128	54.2	37.5	44.3	59.6	57.8	53.2
E046	chr3	123722127	123722280	TRUE	OK	61.0	0.0102	0.5459	0.8706	-0.152	-0.076	63.1	35.5	57.4	72.5	79.3	58.0
E047	chr3	123725943	123726078	TRUE	OK	58.1	0.0148	0.7492	0.935	-0.116	-0.058	65.1	27.1	54.4	76.4	62.7	62.8
E048	chr3	123732895	123733102	TRUE	OK	36.5	0.0312	0.3791	0.8165	0.260	0.130	41.4	12.5	25.2	54.6	38.2	47.4
E049	chr3	123733686	123734222	TRUE	OK	115.3	0.00356	0.007517	0.3515	0.409	0.205	96.6	54.2	86.6	152.9	148.9	152.8
E050	chr3	123734222	123735397	FALSE	LOW_COUNTS_INDEP_FILTER	3.1	0.0507	0.8405	NA	NA	NA	1.0	3.1	3.0	3.0	5.9	2.9
E051	chr3	123735397	123735416	TRUE	OK	27.8	0.0206	0.5101	0.8593	0.185	0.092	32.5	11.5	18.1	37.7	35.3	31.9
E052	chr3	123735416	123735770	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.257	0.3917	NA	NA	NA	0.0	1.0	1.0	0.0	0.0	1.0
E053	chr3	123737240	123737377	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.0955	0.4171	NA	NA	NA	3.0	0.0	2.0	2.0	1.0	1.0
E054	chr3	123737377	123737543	TRUE	OK	43.0	0.0134	0.9088	0.9784	-0.062	-0.031	46.3	17.7	42.3	55.6	45.0	51.2
E055	chr3	123738896	123738963	TRUE	OK	29.1	0.0141	0.5157	0.861	-0.219	-0.109	30.6	12.5	33.2	37.7	26.4	33.8
E056	chr3	123738963	123739062	TRUE	OK	27.6	0.00705	0.6526	0.9052	0.115	0.058	21.7	14.6	27.2	37.7	30.4	33.8
E057	chr3	123739952	123740001	TRUE	OK	15.7	0.00998	0.4887	0.8523	0.236	0.118	13.8	7.3	13.1	18.9	20.6	20.3
E058	chr3	123752330	123752538	TRUE	OK	26.8	0.00647	0.4868	0.8517	-0.186	-0.093	22.7	21.9	25.2	29.8	28.4	32.9
E059	chr3	123793676	123793841	TRUE	OK	24.8	0.00731	0.2153	0.7633	-0.349	-0.175	24.7	17.7	26.2	29.8	21.5	29.0
E060	chr3	123793841	123793844	TRUE	OK	13.5	0.0257	0.7376	0.9319	0.111	0.056	13.8	3.1	14.1	20.8	12.7	16.4
E061	chr3	123793844	123793887	FALSE	LOW_COUNTS_INDEP_FILTER	1.5	0.24	0.9822	NA	NA	NA	0.0	0.0	4.0	1.0	2.0	1.9
E062	chr3	123799832	123800188	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.85	0.7954	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
E063	chr3	123831547	123831670	TRUE	OK	17.3	0.0469	0.4418	0.8369	0.340	0.170	17.7	5.2	13.1	29.8	24.5	13.5
E064	chr3	123835867	123835935	FALSE	LOW_COUNTS_INDEP_FILTER	1.8	0.0712	0.7282	NA	NA	NA	2.0	1.0	2.0	2.0	2.9	1.0
E065	chr3	123876558	123876617	FALSE	LOW_COUNTS_INDEP_FILTER	8.0	0.134	0.9015	NA	NA	NA	6.9	5.2	5.0	17.9	10.8	1.9
E066	chr3	123876617	123876618	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.395	0.7865	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	1.0
E067	chr3	123884205	123884308	FALSE	LOW_COUNTS_INDEP_FILTER	7.0	0.2	0.9892	NA	NA	NA	5.9	6.3	3.0	15.9	9.8	1.0
E068	chr3	123884308	123884314	FALSE	LOW_COUNTS_INDEP_FILTER	3.5	0.513	0.894	NA	NA	NA	2.0	5.2	0.0	9.9	3.9	0.0
E069	chr3	123884314	123884331	FALSE	LOW_COUNTS_INDEP_FILTER	2.2	0.419	0.9615	NA	NA	NA	1.0	4.2	0.0	5.0	2.9	0.0
J070	chr3	123614349	123618638	TRUE	OK	27.9	0.0164	0.4312	0.8334	-0.224	-0.112	23.7	22.9	27.2	24.8	24.5	44.5
J071	chr3	123618767	123620206	FALSE	LOW_COUNTS_INDEP_FILTER	6.6	0.0619	0.8685	NA	NA	NA	2.0	8.3	5.0	8.9	4.9	10.6
J072	chr3	123618770	123620206	TRUE	OK	25.1	0.00499	0.7741	0.9425	-0.076	-0.038	19.7	20.9	22.2	30.8	26.4	30.9
J073	chr3	123620336	123620496	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J074	chr3	123620336	123626817	TRUE	OK	28.7	0.0213	0.8568	0.965	-0.058	-0.029	14.8	26.1	30.2	36.7	27.4	36.7
J075	chr3	123626941	123629473	TRUE	OK	31.7	0.0249	0.6563	0.9063	-0.145	-0.073	18.7	30.2	32.2	36.7	43.1	29.0
J076	chr3	123626941	123638070	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J077	chr3	123629626	123638070	TRUE	OK	36.0	0.00365	0.1502	0.7349	0.331	0.165	26.6	22.9	26.2	48.6	45.0	46.4
J078	chr3	123638194	123640286	TRUE	OK	32.6	0.00841	0.7144	0.9244	-0.095	-0.048	33.5	24.0	24.2	46.7	33.3	33.8
J079	chr3	123640504	123647223	TRUE	OK	33.8	0.00417	0.488	0.8521	0.158	0.079	31.6	16.7	28.2	43.7	41.1	41.6
J080	chr3	123640504	123648970	FALSE	LOW_COUNTS_INDEP_FILTER	2.1	0.0398	0.2396	NA	NA	NA	1.0	1.0	1.0	4.0	2.9	2.9
J081	chr3	123647427	123648970	TRUE	OK	33.9	0.00477	0.6189	0.8942	-0.118	-0.059	33.5	27.1	25.2	34.7	41.1	41.6
J082	chr3	123649064	123649161	TRUE	OK	29.6	0.00427	0.7694	0.9411	-0.075	-0.038	26.6	19.8	27.2	30.8	35.3	37.7
J083	chr3	123649194	123657125	TRUE	OK	23.7	0.0161	0.448	0.839	0.218	0.109	17.7	7.3	27.2	31.8	26.4	31.9
J084	chr3	123657428	123664104	TRUE	OK	23.5	0.00975	0.3083	0.7938	0.291	0.146	18.7	7.3	24.2	25.8	32.3	32.9
J085	chr3	123664258	123666218	TRUE	OK	26.7	0.0262	0.4173	0.8293	-0.311	-0.156	19.7	16.7	36.3	37.7	27.4	22.2
J086	chr3	123666346	123667136	TRUE	OK	24.8	0.0296	0.5205	0.8625	-0.228	-0.114	20.7	15.6	29.2	37.7	15.7	30.0
J087	chr3	123667187	123682223	TRUE	OK	26.2	0.0413	0.6078	0.8905	-0.193	-0.096	26.6	13.6	28.2	35.7	14.7	38.7
J088	chr3	123682310	123692282	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J089	chr3	123682310	123692734	TRUE	OK	21.3	0.05	0.8026	0.9506	0.195	0.097	17.7	14.6	15.1	29.8	11.8	38.7
J090	chr3	123692851	123693498	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.266	0.777	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	1.0
J091	chr3	123692851	123698808	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J092	chr3	123692851	123700019	TRUE	OK	19.5	0.00795	0.2683	0.7817	0.358	0.179	13.8	14.6	12.1	20.8	23.5	31.9
J093	chr3	123701005	123701437	TRUE	OK	26.7	0.00522	0.5439	0.8699	0.158	0.079	21.7	14.6	24.2	28.8	31.3	39.6
J094	chr3	123701509	123707753	TRUE	OK	24.7	0.0191	0.2083	0.7608	0.442	0.221	21.7	12.5	15.1	31.8	22.5	44.5
J095	chr3	123708003	123708697	TRUE	OK	32.6	0.00395	0.005681	0.3122	0.680	0.340	18.7	16.7	23.2	45.7	46.0	45.4
J096	chr3	123708895	123709755	TRUE	OK	26.6	0.00447	0.5343	0.8669	-0.164	-0.082	22.7	18.8	27.2	30.8	28.4	31.9
J097	chr3	123709893	123722127	TRUE	OK	29.8	0.0142	0.3838	0.8184	-0.263	-0.132	35.5	24.0	20.1	33.8	37.2	28.0
J098	chr3	123722280	123725943	TRUE	OK	40.6	0.011	0.532	0.8661	-0.190	-0.095	43.4	17.7	44.3	48.6	47.0	42.5
J099	chr3	123726078	123732895	TRUE	OK	15.3	0.026	0.9393	0.9856	-0.075	-0.037	19.7	4.2	14.1	20.8	15.7	17.4
J100	chr3	123726078	123733686	TRUE	OK	12.7	0.0115	0.7513	0.9356	0.118	0.059	9.9	7.3	12.1	18.9	17.6	10.6
J101	chr3	123733102	123733686	TRUE	OK	19.9	0.0206	0.1905	0.754	0.471	0.236	20.7	9.4	9.1	30.8	20.6	29.0
J102	chr3	123734222	123735397	TRUE	OK	25.4	0.0265	0.5625	0.8758	0.165	0.082	30.6	9.4	17.1	35.7	31.3	28.0
J103	chr3	123735416	123737377	TRUE	OK	25.2	0.027	0.6727	0.9112	0.108	0.054	31.6	10.4	16.1	34.7	30.4	28.0
J104	chr3	123737543	123738896	TRUE	OK	22.5	0.0199	0.413	0.8281	-0.318	-0.159	21.7	9.4	30.2	28.8	19.6	25.1
J105	chr3	123739062	123739952	TRUE	OK	14.0	0.00804	0.3309	0.8012	0.343	0.171	11.8	5.2	12.1	17.9	19.6	17.4
J106	chr3	123740001	123752330	TRUE	OK	11.5	0.00959	0.194	0.7558	0.519	0.260	7.9	6.3	8.1	13.9	18.6	14.5
J107	chr3	123740001	123793676	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.558	0.4058	NA	NA	NA	1.0	0.0	0.0	0.0	0.0	0.0
J108	chr3	123752538	123793676	TRUE	OK	13.9	0.0091	0.0789	0.6755	-0.621	-0.310	11.8	14.6	16.1	12.9	10.8	17.4
J109	chr3	123793844	123799832	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.556	0.7694	NA	NA	NA	0.0	0.0	0.0	1.0	0.0	0.0
J110	chr3	123793844	123831547	TRUE	OK	10.9	0.0209	0.4707	0.8464	0.297	0.148	11.8	2.1	9.1	17.9	11.8	12.6
J111	chr3	123831670	123835867	FALSE	LOW_COUNTS_INDEP_FILTER	1.3	0.0683	0.5983	NA	NA	NA	2.0	0.0	2.0	1.0	2.0	1.0
J112	chr3	123831670	123876558	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.134	0.978	NA	NA	NA	5.9	2.1	4.0	10.9	6.9	1.0
J113	chr3	123835935	123876558	FALSE	LOW_COUNTS_INDEP_FILTER	1.2	0.0952	0.8585	NA	NA	NA	1.0	1.0	1.0	1.0	2.9	0.0
J114	chr3	123876617	123884205	FALSE	LOW_COUNTS_INDEP_FILTER	5.1	0.165	0.7621	NA	NA	NA	3.0	4.2	3.0	12.9	6.9	1.0
N115	chr3	123611355	123612238	FALSE	LOW_COUNTS_INDEP_FILTER	8.3	0.0155	0.003935	NA	NA	NA	8.9	11.5	11.1	3.0	7.8	7.7

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000065534.18
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE