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Normalized Counts Table (ENSG00000117523.16)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr1	171485550	171485555	TRUE	OK	65.2	0.0112	0.3711	0.8139	0.196	0.098	74.0	43.8	60.4	74.5	82.3	56.1
E002	chr1	171485555	171485595	TRUE	OK	343.9	0.00517	0.7565	0.9373	-0.058	-0.029	407.2	255.5	368.6	369.3	321.2	341.3
E003	chr1	171485595	171485735	TRUE	OK	678.5	0.0059	0.7105	0.9231	0.033	0.016	752.3	492.2	728.2	732.7	697.2	668.1
E004	chr1	171509559	171512031	TRUE	OK	18.0	0.0409	0.388	0.8195	0.358	0.179	21.7	7.3	17.1	22.8	26.4	12.6
E005	chr1	171512031	171512200	TRUE	OK	1122.6	0.0047	0.7646	0.9396	0.021	0.011	1276.9	842.5	1158.3	1244.0	1112.5	1101.2
E006	chr1	171512200	171512994	TRUE	OK	18.6	0.0871	0.6606	0.9077	-0.194	-0.097	24.7	10.4	23.2	26.8	20.6	5.8
E007	chr1	171512994	171513000	TRUE	OK	457.0	0.00405	0.4276	0.8323	0.085	0.042	519.6	343.1	441.2	532.1	456.3	449.6
E008	chr1	171513000	171513172	TRUE	OK	1112.8	0.00193	0.5508	0.8721	0.045	0.023	1249.3	935.3	1037.4	1259.8	1058.6	1136.0
E009	chr1	171514535	171514630	TRUE	OK	884.5	0.00376	0.4143	0.8285	0.094	0.047	940.7	809.2	768.5	1023.6	809.9	955.2
E010	chr1	171514630	171514645	TRUE	OK	604.0	0.00567	0.7404	0.9328	-0.039	-0.020	667.5	598.5	534.8	662.2	515.1	645.8
E011	chr1	171515733	171515796	TRUE	OK	878.6	0.00782	0.7257	0.928	-0.044	-0.022	921.9	915.5	786.6	949.1	738.4	960.1
E012	chr1	171515796	171515859	TRUE	OK	928.5	0.0101	0.4927	0.8534	-0.114	-0.057	969.2	1046.9	821.9	1011.7	786.4	934.9
E013	chr1	171517585	171517590	TRUE	OK	13.3	0.0897	0.7995	0.9498	-0.170	-0.085	19.7	16.7	5.0	19.9	11.8	6.8
E014	chr1	171517590	171517814	TRUE	OK	1344.8	0.0111	0.2131	0.7626	-0.223	-0.111	1397.2	1612.0	1244.9	1352.2	1149.7	1313.0
E015	chr1	171522176	171522259	TRUE	OK	852.5	0.0105	0.2432	0.7732	-0.205	-0.102	886.4	1013.5	784.6	854.8	728.6	846.9
E016	chr1	171522514	171522556	FALSE	LOW_COUNTS_INDEP_FILTER	4.8	0.0971	0.7851	NA	NA	NA	1.0	7.3	5.0	4.0	7.8	3.9
E017	chr1	171523220	171523348	TRUE	OK	765.8	0.0105	0.5012	0.856	-0.114	-0.057	775.0	875.9	691.0	812.1	649.3	791.8
E018	chr1	171523348	171523354	TRUE	OK	484.6	0.0129	0.4897	0.8526	-0.130	-0.065	457.5	569.3	463.3	507.3	397.6	512.4
E019	chr1	171523354	171523434	TRUE	OK	25.1	0.0218	0.5349	0.8671	-0.198	-0.099	21.7	29.2	28.2	26.8	29.4	15.5
E020	chr1	171523434	171523522	TRUE	OK	734.3	0.00929	0.5779	0.8808	-0.090	-0.045	721.8	830.0	675.8	759.5	653.2	765.7
E021	chr1	171524820	171524855	TRUE	OK	658.9	0.00534	0.7744	0.9426	-0.035	-0.017	679.4	691.3	591.2	686.0	617.9	687.4
E022	chr1	171524855	171524870	TRUE	OK	653.4	0.00467	0.8461	0.9621	0.026	0.013	662.6	662.1	580.2	680.1	632.6	702.9
E023	chr1	171524870	171524965	TRUE	OK	990.3	0.00912	0.9883	0.9972	0.002	0.001	967.3	1083.4	861.2	1022.6	952.8	1054.8
E024	chr1	171527790	171527844	TRUE	OK	949.6	0.0123	0.8599	0.9658	0.028	0.014	919.0	1066.7	781.6	980.9	926.4	1022.9
E025	chr1	171532342	171532775	TRUE	OK	2729.7	0.0463	0.4369	0.8352	-0.331	-0.166	2470.0	4236.6	2178.6	2450.2	2176.9	2865.7
E026	chr1	171532775	171532792	TRUE	OK	1241.9	0.0535	0.2929	0.7896	-0.482	-0.241	1117.1	2139.7	990.1	1062.3	871.6	1270.4
E027	chr1	171532792	171532961	TRUE	OK	2361.7	0.0406	0.3245	0.7994	-0.372	-0.186	2226.4	3616.2	1947.0	2172.2	1793.1	2415.2
E028	chr1	171535427	171535597	TRUE	OK	2042.2	0.02	0.306	0.7933	-0.254	-0.127	2086.4	2657.9	1767.7	1983.6	1706.9	2050.7
E029	chr1	171536028	171536278	TRUE	OK	1319.9	0.00477	0.3555	0.8092	-0.109	-0.054	1436.6	1384.7	1204.6	1385.9	1236.8	1270.4
E030	chr1	171537262	171537473	TRUE	OK	980.1	0.00262	0.7312	0.9298	-0.035	-0.017	1139.8	866.5	910.5	1094.1	904.9	964.9
E031	chr1	171539970	171541829	TRUE	OK	5775.3	0.0118	0.3185	0.797	0.150	0.075	6539.2	3850.8	5871.1	6496.8	5712.1	6182.0
E032	chr1	171541829	171542229	TRUE	OK	1478.5	0.0145	0.2531	0.7765	0.194	0.097	1616.1	894.7	1555.2	1750.3	1437.6	1617.5
E033	chr1	171545478	171545687	TRUE	OK	1049.5	0.0133	0.321	0.7983	0.156	0.078	1133.9	649.6	1139.2	1204.3	1094.8	1075.1
E034	chr1	171550085	171550240	TRUE	OK	907.3	0.016	0.5388	0.8684	0.085	0.043	1005.7	555.8	1029.4	937.2	948.9	966.8
E035	chr1	171557239	171557537	TRUE	OK	1369.6	0.0224	0.3388	0.8036	0.174	0.087	1589.4	748.7	1454.4	1490.2	1479.7	1455.1
E036	chr1	171557537	171557954	TRUE	OK	1201.6	0.0298	0.1861	0.7512	0.294	0.147	1435.6	576.6	1171.4	1403.8	1311.3	1311.0
E037	chr1	171557954	171558143	TRUE	OK	784.6	0.0321	0.4445	0.8377	0.134	0.067	993.9	384.8	822.9	862.7	802.0	841.1
E038	chr1	171561017	171561020	TRUE	OK	524.2	0.0237	0.3749	0.8149	0.160	0.080	632.0	276.3	547.9	583.8	549.4	555.9
E039	chr1	171561020	171561103	TRUE	OK	791.6	0.0183	0.3073	0.7936	0.180	0.090	902.2	447.3	835.0	913.4	800.1	851.8
E040	chr1	171566232	171566421	TRUE	OK	1092.8	0.0154	0.5536	0.8729	0.078	0.039	1289.7	670.5	1169.4	1218.2	1069.4	1139.9
E041	chr1	171566591	171566843	TRUE	OK	1243.2	0.0152	0.57	0.8781	0.072	0.036	1430.7	769.5	1367.8	1321.4	1263.3	1306.2
E042	chr1	171568246	171568339	TRUE	OK	755.5	0.019	0.4159	0.829	0.134	0.067	846.0	431.7	842.0	832.0	793.2	788.0
E043	chr1	171571319	171571421	TRUE	OK	585.9	0.0273	0.2768	0.7837	0.226	0.113	678.4	290.9	619.4	688.0	632.6	606.2
E044	chr1	171574926	171575128	TRUE	OK	857.6	0.0264	0.1509	0.7351	0.314	0.157	994.9	419.2	838.0	1003.7	947.0	942.7
E045	chr1	171577433	171577637	TRUE	OK	1021.2	0.0291	0.2174	0.7637	0.270	0.135	1203.9	495.3	1029.4	1226.1	1070.4	1102.2
E046	chr1	171579353	171579466	TRUE	OK	1090.6	0.0266	0.2792	0.7847	0.220	0.110	1292.7	554.7	1121.0	1291.6	1113.4	1169.9
E047	chr1	171579827	171579964	TRUE	OK	1181.1	0.0282	0.1779	0.7482	0.296	0.148	1416.9	577.7	1132.1	1422.7	1247.6	1289.8
E048	chr1	171583955	171584187	TRUE	OK	1612.8	0.0176	0.1805	0.7491	0.246	0.123	1878.3	917.6	1559.2	1911.1	1648.1	1762.5
E049	chr1	171584418	171584526	TRUE	OK	1148.6	0.00953	0.3636	0.8117	0.123	0.061	1311.4	761.2	1165.4	1325.4	1166.3	1162.1
E050	chr1	171584526	171584541	TRUE	OK	216.6	0.0125	0.7474	0.9345	0.039	0.019	238.6	140.8	248.8	246.2	227.2	198.2
E051	chr1	171587002	171587072	TRUE	OK	1020.4	0.00714	0.3167	0.7964	0.125	0.063	1140.8	704.9	1027.4	1180.4	1047.8	1021.0
E052	chr1	171587072	171587221	TRUE	OK	1172.0	0.00701	0.5604	0.8749	0.064	0.032	1345.9	836.3	1190.5	1322.4	1201.6	1135.1
E053	chr1	171587647	171587661	TRUE	OK	683.3	0.00781	0.6397	0.901	0.048	0.024	802.6	475.5	698.0	772.4	675.7	675.8
E054	chr1	171587661	171587751	TRUE	OK	967.1	0.0117	0.5247	0.8637	0.078	0.039	1153.6	624.6	990.1	1060.3	977.3	996.8
E055	chr1	171588378	171588505	TRUE	OK	1179.6	0.0122	0.4685	0.8456	0.097	0.049	1355.8	753.9	1245.9	1247.9	1219.2	1255.0
E056	chr1	171589368	171589605	TRUE	OK	204.7	0.00176	1.047e-05	0.005748	0.476	0.238	188.3	139.7	174.2	249.2	234.0	242.7
E057	chr1	171591151	171591200	TRUE	OK	551.9	0.0123	0.638	0.9004	0.050	0.025	681.3	357.7	556.0	570.9	544.5	601.4
E058	chr1	171591200	171591204	TRUE	OK	429.7	0.00662	0.7371	0.9318	0.029	0.015	499.9	306.6	444.2	434.8	422.1	470.8
E059	chr1	171591204	171591313	TRUE	OK	83.6	0.00988	0.5011	0.8559	0.129	0.064	102.5	64.6	67.5	78.4	85.2	103.5
E060	chr1	171591586	171592223	TRUE	OK	2748.4	0.0038	0.1649	0.7416	0.132	0.066	2991.6	2044.8	2705.4	2961.5	2845.8	2941.1
E061	chr1	171592223	171593258	TRUE	OK	4078.0	0.00986	0.1622	0.7401	-0.231	-0.115	4215.2	4700.6	3928.2	4012.9	3828.0	3783.2
E062	chr1	171593258	171593506	TRUE	OK	589.8	0.0361	0.1748	0.7462	-0.493	-0.247	551.2	961.4	517.7	502.4	512.2	494.1
E063	chr1	171593506	171593511	FALSE	LOW_COUNTS_INDEP_FILTER	6.5	0.148	0.9954	NA	NA	NA	3.9	14.6	2.0	6.9	6.9	4.8
J064	chr1	171485735	171512031	TRUE	OK	523.2	0.00447	0.8049	0.9512	-0.046	-0.023	597.5	393.1	572.1	551.0	500.4	525.0
J065	chr1	171512200	171512994	TRUE	OK	445.7	0.00387	0.3765	0.8155	0.094	0.047	505.8	330.5	431.1	521.2	443.6	441.8
J066	chr1	171512200	171513000	TRUE	OK	140.2	0.00223	0.3495	0.8073	0.115	0.057	141.0	107.4	147.1	158.8	150.8	136.3
J067	chr1	171513172	171514535	TRUE	OK	650.8	0.00447	0.2897	0.7885	0.132	0.066	697.1	572.5	557.0	764.4	580.7	732.9
J068	chr1	171514630	171515733	TRUE	OK	83.2	0.00247	0.01708	0.4687	0.368	0.184	76.9	70.9	65.5	104.2	82.3	99.6
J069	chr1	171514645	171515733	TRUE	OK	553.4	0.00546	0.745	0.934	-0.039	-0.020	616.3	549.5	484.5	598.7	475.9	595.6
J070	chr1	171515859	171517585	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.557	0.6237	NA	NA	NA	0.0	1.0	0.0	3.0	0.0	0.0
J071	chr1	171515859	171517590	TRUE	OK	728.2	0.0129	0.4436	0.8374	-0.149	-0.075	736.5	870.7	645.6	762.5	616.9	736.7
J072	chr1	171517814	171522176	TRUE	OK	639.5	0.0085	0.1675	0.743	-0.222	-0.111	692.2	746.6	587.2	618.5	557.2	635.2
J073	chr1	171522259	171523220	TRUE	OK	487.3	0.00997	0.5671	0.8772	-0.096	-0.048	499.9	551.6	430.1	518.2	414.2	509.5
J074	chr1	171522556	171523220	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0706	0.5969	NA	NA	NA	1.0	5.2	4.0	1.0	2.9	3.9
J075	chr1	171523354	171523434	TRUE	OK	472.4	0.0128	0.5569	0.8738	-0.108	-0.054	444.7	549.5	448.2	499.4	388.8	503.7
J076	chr1	171523522	171524820	TRUE	OK	454.4	0.0059	0.7397	0.9326	-0.045	-0.023	469.3	487.0	401.9	460.7	434.8	472.8
J077	chr1	171524965	171527790	TRUE	OK	777.1	0.00805	0.7079	0.9223	0.058	0.029	757.3	822.7	660.7	803.2	773.6	845.0
J078	chr1	171527844	171532342	TRUE	OK	757.6	0.0168	0.8484	0.9627	0.033	0.017	703.0	887.4	613.4	773.4	722.7	846.0
J079	chr1	171532961	171535427	TRUE	OK	1374.8	0.0309	0.4307	0.8332	-0.254	-0.127	1331.1	1921.7	1139.2	1292.6	1092.9	1471.5
J080	chr1	171535597	171536028	TRUE	OK	792.5	0.00582	0.5301	0.8654	-0.085	-0.042	878.5	833.1	687.9	842.9	729.6	783.1
J081	chr1	171536278	171537262	TRUE	OK	439.5	0.00233	0.2236	0.7664	-0.119	-0.060	494.0	445.2	406.9	462.6	406.4	421.5
J082	chr1	171537473	171539970	TRUE	OK	525.9	0.00551	0.9852	0.9963	-0.006	-0.003	642.9	430.6	476.4	612.6	473.0	520.2
J083	chr1	171542229	171545478	TRUE	OK	504.2	0.0153	0.2689	0.782	0.196	0.098	547.2	296.1	538.9	607.6	520.0	515.3
J084	chr1	171545687	171550085	TRUE	OK	503.4	0.0112	0.3395	0.8038	0.143	0.071	543.3	318.0	545.9	538.1	526.9	548.2
J085	chr1	171550240	171557239	TRUE	OK	501.4	0.0221	0.5433	0.8698	0.097	0.048	592.6	285.7	546.9	485.5	540.6	556.9
J086	chr1	171558143	171561017	TRUE	OK	516.3	0.0244	0.3824	0.8178	0.160	0.080	622.2	273.2	538.9	567.9	544.5	551.1
J087	chr1	171558143	171561020	TRUE	OK	19.2	0.0497	0.2843	0.7864	0.561	0.281	19.7	11.5	14.1	36.7	10.8	22.2
J088	chr1	171561103	171566232	TRUE	OK	518.1	0.0208	0.4963	0.8545	0.117	0.058	585.7	295.1	581.2	616.5	482.8	547.2
J089	chr1	171566421	171566591	TRUE	OK	553.3	0.0147	0.4298	0.8329	0.118	0.059	655.7	334.7	570.1	593.7	563.1	602.3
J090	chr1	171566843	171568246	TRUE	OK	563.8	0.0154	0.5702	0.8782	0.076	0.038	633.0	345.1	636.6	592.7	576.8	598.5
J091	chr1	171566843	171574926	TRUE	OK	11.0	0.0268	0.1132	0.7111	0.738	0.369	7.9	7.3	9.1	9.9	10.8	21.3
J092	chr1	171568339	171571319	TRUE	OK	414.3	0.0221	0.2791	0.7847	0.214	0.107	459.5	220.0	448.2	477.5	450.5	430.2
J093	chr1	171571421	171574926	TRUE	OK	353.5	0.0377	0.1369	0.7275	0.391	0.196	403.3	148.1	347.5	439.8	397.6	384.8
J094	chr1	171575128	171577433	TRUE	OK	453.7	0.026	0.1886	0.7528	0.285	0.142	541.3	225.2	436.1	521.2	477.9	520.2
J095	chr1	171577637	171579353	TRUE	OK	556.8	0.0323	0.2325	0.7701	0.276	0.138	649.8	260.7	571.1	677.1	571.9	610.1
J096	chr1	171579466	171579827	TRUE	OK	794.7	0.0297	0.2444	0.7737	0.255	0.128	940.7	387.9	804.8	939.2	823.6	872.1
J097	chr1	171579964	171583955	TRUE	OK	725.6	0.0297	0.124	0.7194	0.361	0.181	876.6	345.1	648.7	874.6	755.0	853.7
J098	chr1	171584187	171584418	TRUE	OK	771.7	0.00863	0.2484	0.7751	0.160	0.080	856.8	505.7	782.6	901.5	772.7	811.2
J099	chr1	171584526	171587002	TRUE	OK	592.4	0.00434	0.171	0.7444	0.150	0.075	643.9	418.1	589.2	685.0	604.2	613.9
J100	chr1	171584541	171587002	TRUE	OK	191.8	0.00902	0.7446	0.9339	0.040	0.020	210.0	129.3	216.6	224.4	189.0	181.8
J101	chr1	171587221	171587647	TRUE	OK	572.4	0.0069	0.8182	0.9547	0.014	0.007	661.6	408.7	604.3	643.3	569.9	546.3
J102	chr1	171587751	171588378	TRUE	OK	682.4	0.0167	0.3744	0.8148	0.143	0.072	815.4	400.4	692.0	743.6	700.2	742.5
J103	chr1	171588505	171589368	TRUE	OK	79.6	0.00343	0.001593	0.1701	0.520	0.260	67.0	53.2	71.5	85.4	96.0	104.4
J104	chr1	171588505	171591151	TRUE	OK	382.8	0.0163	0.777	0.9435	0.015	0.008	478.2	235.7	405.9	390.2	365.3	421.5
J105	chr1	171588505	171591586	TRUE	OK	273.1	0.0146	0.7314	0.9298	0.031	0.015	328.3	168.9	297.1	277.0	289.9	277.5
J106	chr1	171589605	171591151	TRUE	OK	24.2	0.0058	0.9513	0.9887	-0.022	-0.011	28.6	16.7	26.2	29.8	22.5	21.3
J107	chr1	171589605	171591586	TRUE	OK	49.1	0.004	0.009365	0.3836	0.521	0.260	44.4	36.5	37.3	63.5	46.0	66.7
J108	chr1	171591200	171591586	TRUE	OK	19.6	0.0647	0.3129	0.7952	0.419	0.209	29.6	8.3	11.1	15.9	22.5	30.0
J109	chr1	171591204	171591586	TRUE	OK	372.7	0.0048	0.9546	0.9894	-0.024	-0.012	429.9	273.2	401.9	390.2	359.4	381.9
N110	chr1	171568339	171574926	TRUE	OK	19.5	0.00568	0.8657	0.9673	-0.053	-0.026	22.7	16.7	19.1	20.8	16.6	21.3
N111	chr1	171587221	171588378	TRUE	OK	22.8	0.00534	0.1835	0.7504	0.363	0.181	22.7	14.6	21.2	29.8	25.5	23.2

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000117523.16
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE