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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr8 | 119730773 | 119731814 | TRUE | OK | 1250.2 | 0.0279 | 0.382 | 0.8177 | -0.235 | -0.118 | 1262.1 | 1622.5 | 1253.0 | 1135.8 | 1104.6 | 1123.5 |
E002 | chr8 | 119731814 | 119732061 | TRUE | OK | 677.7 | 0.00437 | 0.3763 | 0.8155 | -0.096 | -0.048 | 737.5 | 700.7 | 736.3 | 673.1 | 579.7 | 639.1 |
E003 | chr8 | 119732061 | 119732186 | TRUE | OK | 476.1 | 0.00311 | 0.7618 | 0.9389 | -0.038 | -0.019 | 551.2 | 394.1 | 557.0 | 494.4 | 401.5 | 458.3 |
E004 | chr8 | 119742533 | 119742656 | TRUE | OK | 424.4 | 0.0017 | 0.05787 | 0.6434 | 0.167 | 0.084 | 450.6 | 336.8 | 468.4 | 425.9 | 414.2 | 450.5 |
E005 | chr8 | 119744287 | 119744393 | TRUE | OK | 380.5 | 0.00153 | 0.02065 | 0.4968 | 0.205 | 0.102 | 414.1 | 302.4 | 394.8 | 386.2 | 397.6 | 387.7 |
E006 | chr8 | 119744393 | 119744586 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.5 | 0.0325 | 0.6102 | NA | NA | NA | 4.9 | 9.4 | 4.0 | 7.9 | 4.9 | 7.7 |
E007 | chr8 | 119744880 | 119745036 | TRUE | OK | 122.7 | 0.00263 | 0.5004 | 0.8557 | -0.094 | -0.047 | 149.9 | 112.6 | 131.9 | 121.1 | 102.8 | 118.0 |
E008 | chr8 | 119746704 | 119746865 | TRUE | OK | 436.1 | 0.00179 | 0.5455 | 0.8704 | 0.050 | 0.025 | 493.0 | 361.8 | 484.5 | 417.0 | 441.7 | 418.6 |
E009 | chr8 | 119746865 | 119746934 | TRUE | OK | 308.9 | 0.00282 | 0.3361 | 0.8028 | 0.106 | 0.053 | 347.1 | 264.9 | 319.3 | 307.8 | 331.0 | 283.3 |
E010 | chr8 | 119756005 | 119756055 | TRUE | OK | 306.2 | 0.00309 | 0.4517 | 0.8399 | 0.085 | 0.043 | 330.3 | 258.6 | 340.4 | 312.7 | 324.1 | 270.7 |
E011 | chr8 | 119756055 | 119756115 | TRUE | OK | 311.4 | 0.00217 | 0.4122 | 0.8277 | 0.082 | 0.041 | 342.1 | 260.7 | 343.5 | 313.7 | 324.1 | 284.2 |
E012 | chr8 | 119758072 | 119758142 | TRUE | OK | 334.6 | 0.00155 | 0.8591 | 0.9656 | -0.022 | -0.011 | 397.4 | 282.6 | 370.7 | 322.7 | 315.3 | 319.1 |
E013 | chr8 | 119760454 | 119760598 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.857 | 0.5799 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
E014 | chr8 | 119760598 | 119760668 | TRUE | OK | 305.0 | 0.00313 | 0.3158 | 0.7962 | -0.129 | -0.064 | 373.7 | 247.1 | 368.6 | 272.0 | 285.0 | 283.3 |
E015 | chr8 | 119760668 | 119760738 | TRUE | OK | 347.5 | 0.00542 | 0.5384 | 0.8683 | -0.107 | -0.053 | 428.9 | 262.8 | 428.1 | 333.6 | 311.4 | 320.0 |
E016 | chr8 | 119761607 | 119761772 | TRUE | OK | 13.9 | 0.0767 | 0.3956 | 0.8224 | 0.350 | 0.175 | 9.9 | 4.2 | 24.2 | 13.9 | 11.8 | 19.3 |
E017 | chr8 | 119762414 | 119762534 | TRUE | OK | 329.9 | 0.0114 | 0.5255 | 0.8641 | -0.162 | -0.081 | 445.7 | 230.4 | 404.9 | 309.8 | 287.9 | 300.7 |
E018 | chr8 | 119762534 | 119762608 | TRUE | OK | 285.2 | 0.0125 | 0.6595 | 0.9074 | -0.130 | -0.065 | 374.7 | 193.9 | 357.6 | 255.1 | 250.7 | 279.4 |
E019 | chr8 | 119762608 | 119762908 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.032 | 0.2307 | NA | NA | NA | 6.9 | 3.1 | 8.1 | 4.0 | 3.9 | 1.9 |
E020 | chr8 | 119767002 | 119767128 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.5 | 0.125 | 0.888 | NA | NA | NA | 1.0 | 5.2 | 2.0 | 1.0 | 2.0 | 3.9 |
E021 | chr8 | 119778018 | 119778129 | TRUE | OK | 255.9 | 0.00808 | 0.6369 | 0.9 | -0.107 | -0.054 | 323.4 | 183.5 | 318.3 | 236.3 | 224.3 | 249.4 |
E022 | chr8 | 119781052 | 119781193 | TRUE | OK | 346.5 | 0.00721 | 0.5183 | 0.8618 | 0.077 | 0.039 | 426.9 | 245.0 | 382.7 | 338.5 | 319.2 | 366.4 |
E023 | chr8 | 119783380 | 119783633 | TRUE | OK | 544.1 | 0.00175 | 0.8267 | 0.9569 | -0.020 | -0.010 | 597.5 | 478.6 | 631.5 | 552.0 | 472.0 | 532.7 |
E024 | chr8 | 119785200 | 119785266 | TRUE | OK | 343.9 | 0.00554 | 0.5695 | 0.8779 | -0.068 | -0.034 | 364.8 | 356.6 | 374.7 | 363.4 | 285.9 | 318.1 |
E025 | chr8 | 119788337 | 119788353 | TRUE | OK | 241.3 | 0.00198 | 0.5561 | 0.8736 | -0.062 | -0.031 | 275.1 | 229.4 | 262.9 | 248.2 | 214.5 | 217.5 |
E026 | chr8 | 119788353 | 119788447 | TRUE | OK | 370.8 | 0.00161 | 0.8703 | 0.9686 | -0.016 | -0.008 | 426.9 | 327.4 | 407.9 | 386.2 | 332.0 | 344.2 |
E027 | chr8 | 119788789 | 119788904 | TRUE | OK | 384.1 | 0.00369 | 0.9818 | 0.9956 | -0.007 | -0.003 | 450.6 | 315.9 | 434.1 | 389.2 | 318.3 | 396.4 |
E028 | chr8 | 119789591 | 119789678 | TRUE | OK | 311.9 | 0.00918 | 0.5812 | 0.8816 | 0.072 | 0.036 | 375.7 | 214.8 | 360.6 | 321.7 | 267.3 | 331.6 |
E029 | chr8 | 119789678 | 119789746 | TRUE | OK | 298.1 | 0.00909 | 0.6104 | 0.8912 | 0.063 | 0.032 | 383.6 | 210.6 | 317.3 | 295.9 | 263.4 | 318.1 |
E030 | chr8 | 119791323 | 119791459 | TRUE | OK | 381.2 | 0.0108 | 0.3088 | 0.794 | 0.149 | 0.074 | 472.3 | 245.0 | 417.0 | 392.2 | 373.1 | 387.7 |
E031 | chr8 | 119791459 | 119791874 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.4 | 0.0212 | 0.009242 | NA | NA | NA | 4.9 | 3.1 | 3.0 | 9.9 | 8.8 | 8.7 |
E032 | chr8 | 119793365 | 119793451 | TRUE | OK | 347.8 | 0.00824 | 0.07035 | 0.6636 | 0.269 | 0.134 | 414.1 | 225.2 | 354.5 | 363.4 | 355.5 | 374.2 |
E033 | chr8 | 119795531 | 119795631 | TRUE | OK | 296.2 | 0.00246 | 0.001675 | 0.1744 | 0.331 | 0.166 | 321.4 | 208.5 | 297.1 | 315.7 | 314.3 | 320.0 |
E034 | chr8 | 119796989 | 119797103 | TRUE | OK | 266.4 | 0.00476 | 0.001763 | 0.1789 | 0.414 | 0.207 | 295.8 | 178.3 | 247.8 | 285.9 | 281.1 | 309.4 |
E035 | chr8 | 119797661 | 119797830 | TRUE | OK | 315.4 | 0.0117 | 0.04507 | 0.611 | 0.347 | 0.174 | 379.6 | 189.8 | 307.2 | 338.5 | 344.7 | 332.6 |
E036 | chr8 | 119797830 | 119797846 | TRUE | OK | 191.8 | 0.0203 | 0.2549 | 0.7774 | 0.233 | 0.116 | 241.6 | 106.4 | 205.5 | 179.7 | 220.3 | 197.2 |
E037 | chr8 | 119801793 | 119802025 | TRUE | OK | 358.5 | 0.018 | 0.4884 | 0.8523 | 0.102 | 0.051 | 466.4 | 212.7 | 403.9 | 376.3 | 352.5 | 339.4 |
E038 | chr8 | 119803877 | 119803960 | TRUE | OK | 241.5 | 0.0204 | 0.9398 | 0.9857 | -0.068 | -0.034 | 327.4 | 150.2 | 292.1 | 267.1 | 194.9 | 217.5 |
E039 | chr8 | 119803960 | 119804019 | TRUE | OK | 241.1 | 0.0115 | 0.8107 | 0.9528 | 0.015 | 0.008 | 299.7 | 160.6 | 288.1 | 243.2 | 202.7 | 252.3 |
E040 | chr8 | 119806282 | 119806401 | TRUE | OK | 292.5 | 0.00742 | 0.7302 | 0.9295 | 0.036 | 0.018 | 366.8 | 212.7 | 322.3 | 302.8 | 248.7 | 301.7 |
E041 | chr8 | 119819345 | 119819506 | TRUE | OK | 319.7 | 0.00603 | 0.572 | 0.8789 | 0.062 | 0.031 | 390.5 | 229.4 | 357.6 | 334.6 | 288.9 | 317.1 |
E042 | chr8 | 119831676 | 119831731 | TRUE | OK | 248.2 | 0.00996 | 0.8128 | 0.9534 | 0.011 | 0.006 | 321.4 | 168.9 | 281.0 | 238.3 | 223.3 | 256.2 |
E043 | chr8 | 119832481 | 119832834 | TRUE | OK | 557.2 | 0.0118 | 0.3392 | 0.8037 | 0.143 | 0.072 | 657.7 | 361.8 | 644.6 | 560.9 | 516.1 | 602.3 |
E044 | chr8 | 119832834 | 119832841 | TRUE | OK | 24.2 | 0.0103 | 0.2905 | 0.7888 | -0.327 | -0.163 | 31.6 | 16.7 | 35.3 | 23.8 | 21.5 | 16.4 |
J045 | chr8 | 119732186 | 119742533 | TRUE | OK | 256.7 | 0.00407 | 0.7375 | 0.9319 | 0.033 | 0.017 | 285.0 | 197.1 | 310.2 | 250.2 | 225.2 | 272.6 |
J046 | chr8 | 119742656 | 119744287 | TRUE | OK | 264.8 | 0.00144 | 0.009337 | 0.3832 | 0.250 | 0.125 | 283.0 | 210.6 | 266.9 | 263.1 | 287.9 | 277.5 |
J047 | chr8 | 119744393 | 119744880 | TRUE | OK | 69.3 | 0.00316 | 0.6109 | 0.8915 | 0.086 | 0.043 | 81.8 | 65.7 | 62.4 | 73.5 | 63.7 | 68.6 |
J048 | chr8 | 119744393 | 119746704 | TRUE | OK | 168.4 | 0.00187 | 0.04377 | 0.6067 | 0.229 | 0.115 | 171.6 | 124.1 | 190.4 | 177.7 | 176.3 | 170.2 |
J049 | chr8 | 119745036 | 119746704 | TRUE | OK | 57.9 | 0.00306 | 0.1441 | 0.7323 | -0.272 | -0.136 | 75.9 | 48.0 | 72.5 | 46.7 | 50.9 | 53.2 |
J050 | chr8 | 119746934 | 119756005 | TRUE | OK | 220.1 | 0.00253 | 0.4511 | 0.8398 | 0.084 | 0.042 | 244.5 | 182.5 | 240.7 | 224.4 | 235.0 | 193.4 |
J051 | chr8 | 119756115 | 119758072 | TRUE | OK | 239.3 | 0.00115 | 0.4146 | 0.8285 | 0.075 | 0.037 | 260.3 | 200.2 | 267.9 | 234.3 | 240.9 | 232.0 |
J052 | chr8 | 119758142 | 119760598 | TRUE | OK | 250.4 | 0.00119 | 0.09339 | 0.6919 | -0.165 | -0.083 | 306.6 | 217.9 | 297.1 | 226.4 | 221.3 | 233.0 |
J053 | chr8 | 119760738 | 119761607 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.8 | 0.0638 | 0.7685 | NA | NA | NA | 4.9 | 4.2 | 14.1 | 6.0 | 5.9 | 11.6 |
J054 | chr8 | 119760738 | 119762414 | TRUE | OK | 231.1 | 0.00834 | 0.8463 | 0.9622 | -0.063 | -0.032 | 304.7 | 162.7 | 267.9 | 219.4 | 207.6 | 224.3 |
J055 | chr8 | 119761772 | 119762414 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.9 | 0.121 | 0.3731 | NA | NA | NA | 4.9 | 1.0 | 15.1 | 8.9 | 6.9 | 10.6 |
J056 | chr8 | 119762608 | 119767002 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.263 | 0.251 | NA | NA | NA | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | 0.0 |
J057 | chr8 | 119762608 | 119778018 | TRUE | OK | 177.3 | 0.0104 | 0.6778 | 0.9129 | -0.114 | -0.057 | 231.7 | 121.0 | 220.6 | 158.8 | 157.7 | 174.0 |
J058 | chr8 | 119778129 | 119781052 | TRUE | OK | 157.0 | 0.00233 | 0.9117 | 0.9792 | 0.005 | 0.003 | 183.4 | 119.9 | 185.3 | 145.9 | 146.9 | 160.5 |
J059 | chr8 | 119781193 | 119783380 | TRUE | OK | 214.7 | 0.00779 | 0.2888 | 0.7881 | 0.156 | 0.078 | 253.4 | 142.9 | 239.7 | 216.4 | 196.8 | 238.8 |
J060 | chr8 | 119783633 | 119785200 | TRUE | OK | 271.3 | 0.00674 | 0.5994 | 0.8878 | -0.069 | -0.034 | 280.0 | 286.7 | 298.1 | 291.9 | 222.3 | 248.5 |
J061 | chr8 | 119785266 | 119788337 | TRUE | OK | 232.5 | 0.00141 | 0.3846 | 0.8186 | -0.087 | -0.043 | 261.3 | 225.2 | 258.9 | 237.3 | 204.7 | 207.9 |
J062 | chr8 | 119788447 | 119788789 | TRUE | OK | 252.9 | 0.00139 | 0.9275 | 0.9829 | -0.012 | -0.006 | 295.8 | 216.9 | 279.0 | 259.1 | 217.4 | 249.4 |
J063 | chr8 | 119788904 | 119789591 | TRUE | OK | 229.0 | 0.00642 | 0.6409 | 0.9014 | 0.062 | 0.031 | 265.2 | 168.9 | 265.9 | 236.3 | 189.0 | 248.5 |
J064 | chr8 | 119789746 | 119791323 | TRUE | OK | 211.5 | 0.0127 | 0.5645 | 0.8764 | 0.082 | 0.041 | 278.1 | 137.6 | 226.6 | 209.5 | 188.0 | 229.1 |
J065 | chr8 | 119791459 | 119793365 | TRUE | OK | 250.2 | 0.0108 | 0.236 | 0.7711 | 0.186 | 0.093 | 311.6 | 157.5 | 264.9 | 257.1 | 259.5 | 250.4 |
J066 | chr8 | 119793451 | 119795531 | TRUE | OK | 220.6 | 0.00306 | 0.02854 | 0.5454 | 0.256 | 0.128 | 248.5 | 153.3 | 229.6 | 223.4 | 231.1 | 237.8 |
J067 | chr8 | 119795631 | 119796989 | TRUE | OK | 174.2 | 0.00204 | 1.046e-05 | 0.005748 | 0.518 | 0.259 | 174.5 | 126.2 | 152.1 | 188.6 | 188.0 | 215.6 |
J068 | chr8 | 119795631 | 119797661 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.3 | 0.0676 | 0.5568 | NA | NA | NA | 2.0 | 1.0 | 2.0 | 0.0 | 2.0 | 1.0 |
J069 | chr8 | 119797103 | 119797661 | TRUE | OK | 154.7 | 0.0151 | 0.05597 | 0.6401 | 0.388 | 0.194 | 194.2 | 87.6 | 140.0 | 178.7 | 155.7 | 172.1 |
J070 | chr8 | 119797846 | 119801793 | TRUE | OK | 178.3 | 0.0171 | 0.1843 | 0.7505 | 0.270 | 0.135 | 210.0 | 101.1 | 196.4 | 168.8 | 209.6 | 183.7 |
J071 | chr8 | 119802025 | 119803877 | TRUE | OK | 160.4 | 0.0211 | 0.996 | 0.999 | -0.050 | -0.025 | 221.9 | 98.0 | 188.4 | 180.7 | 134.2 | 139.2 |
J072 | chr8 | 119804019 | 119806282 | TRUE | OK | 188.3 | 0.00797 | 0.765 | 0.9397 | 0.035 | 0.017 | 232.7 | 134.5 | 213.5 | 179.7 | 160.6 | 208.8 |
J073 | chr8 | 119806401 | 119819345 | TRUE | OK | 177.8 | 0.00603 | 0.8143 | 0.9538 | 0.021 | 0.011 | 223.8 | 129.3 | 197.4 | 180.7 | 150.8 | 184.7 |
J074 | chr8 | 119806401 | 119831676 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0213 | 0.3062 | NA | NA | NA | 6.9 | 5.2 | 7.1 | 2.0 | 2.9 | 6.8 |
J075 | chr8 | 119819506 | 119831676 | TRUE | OK | 168.5 | 0.00644 | 0.7442 | 0.9337 | 0.030 | 0.015 | 218.9 | 118.9 | 182.3 | 164.8 | 159.6 | 166.3 |
J076 | chr8 | 119831731 | 119832481 | TRUE | OK | 175.7 | 0.0105 | 0.9871 | 0.9968 | -0.029 | -0.014 | 227.8 | 117.8 | 207.5 | 167.8 | 151.8 | 181.8 |
Color Codes | |||||
---|---|---|---|---|---|
NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000064313.12 | |||||||
---|---|---|---|---|---|---|---|
expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |