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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr5 | 34905259 | 34908171 | TRUE | OK | 923.8 | 0.00221 | 0.3655 | 0.8121 | 0.080 | 0.040 | 981.1 | 1109.5 | 979.0 | 800.2 | 807.9 | 865.3 |
E002 | chr5 | 34908171 | 34908553 | TRUE | OK | 368.6 | 0.00302 | 0.24 | 0.7723 | 0.127 | 0.063 | 356.9 | 463.0 | 384.8 | 335.6 | 337.9 | 333.6 |
E003 | chr5 | 34908553 | 34908654 | TRUE | OK | 309.5 | 0.00309 | 0.5313 | 0.8658 | 0.072 | 0.036 | 352.0 | 373.3 | 301.2 | 300.8 | 274.2 | 255.2 |
E004 | chr5 | 34908654 | 34908948 | TRUE | OK | 722.1 | 0.00301 | 0.1437 | 0.7319 | 0.148 | 0.074 | 769.1 | 883.2 | 702.0 | 699.9 | 615.0 | 663.2 |
E005 | chr5 | 34909257 | 34909356 | TRUE | OK | 563.0 | 0.00265 | 0.04755 | 0.6187 | 0.199 | 0.100 | 590.6 | 671.5 | 544.9 | 549.0 | 475.0 | 547.2 |
E006 | chr5 | 34911553 | 34911617 | TRUE | OK | 496.9 | 0.00137 | 0.0006121 | 0.09986 | 0.286 | 0.143 | 514.7 | 559.9 | 479.4 | 486.5 | 454.4 | 486.3 |
E007 | chr5 | 34911617 | 34911812 | TRUE | OK | 658.3 | 0.00106 | 9.546e-06 | 0.005302 | 0.329 | 0.164 | 667.5 | 704.9 | 669.8 | 680.1 | 599.3 | 628.4 |
E008 | chr5 | 34913469 | 34913578 | TRUE | OK | 369.1 | 0.00712 | 0.04168 | 0.5998 | 0.324 | 0.162 | 384.5 | 352.4 | 399.9 | 420.9 | 307.5 | 349.0 |
E009 | chr5 | 34913870 | 34913926 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.0396 | 0.667 | NA | NA | NA | 9.9 | 6.3 | 9.1 | 2.0 | 8.8 | 5.8 |
E010 | chr5 | 34913926 | 34913969 | TRUE | OK | 26.7 | 0.0139 | 0.9333 | 0.9843 | 0.022 | 0.011 | 32.5 | 20.9 | 36.3 | 25.8 | 23.5 | 21.3 |
E011 | chr5 | 34913969 | 34914026 | TRUE | OK | 27.7 | 0.0173 | 0.6607 | 0.9077 | 0.139 | 0.070 | 35.5 | 20.9 | 33.2 | 30.8 | 19.6 | 26.1 |
E012 | chr5 | 34914476 | 34914694 | TRUE | OK | 13.2 | 0.0133 | 0.1042 | 0.7018 | 0.618 | 0.309 | 12.8 | 10.4 | 13.1 | 17.9 | 9.8 | 15.5 |
E013 | chr5 | 34914694 | 34914801 | TRUE | OK | 525.9 | 0.00813 | 0.1081 | 0.7055 | 0.269 | 0.135 | 589.6 | 528.7 | 534.8 | 591.7 | 420.1 | 490.2 |
E014 | chr5 | 34914801 | 34914961 | TRUE | OK | 630.0 | 0.0024 | 0.0006004 | 0.09896 | 0.331 | 0.166 | 680.3 | 631.9 | 638.6 | 627.4 | 589.5 | 612.0 |
E015 | chr5 | 34915415 | 34915504 | TRUE | OK | 377.8 | 0.00351 | 0.0294 | 0.5495 | 0.256 | 0.128 | 426.0 | 385.8 | 376.7 | 349.5 | 355.5 | 373.2 |
E016 | chr5 | 34915504 | 34915517 | TRUE | OK | 158.1 | 0.0108 | 0.942 | 0.9863 | -0.026 | -0.013 | 220.9 | 168.9 | 149.1 | 144.0 | 137.1 | 128.6 |
E017 | chr5 | 34915517 | 34915548 | TRUE | OK | 112.6 | 0.0119 | 0.7914 | 0.9474 | -0.068 | -0.034 | 158.7 | 126.2 | 103.7 | 91.3 | 103.8 | 91.8 |
E018 | chr5 | 34915548 | 34915615 | TRUE | OK | 63.4 | 0.0058 | 0.6654 | 0.909 | 0.086 | 0.043 | 74.9 | 61.5 | 72.5 | 50.6 | 59.7 | 60.9 |
E019 | chr5 | 34915615 | 34915626 | TRUE | OK | 43.0 | 0.00515 | 0.5298 | 0.8653 | 0.138 | 0.069 | 47.3 | 43.8 | 48.3 | 36.7 | 37.2 | 44.5 |
E020 | chr5 | 34915626 | 34916769 | TRUE | OK | 980.4 | 0.0024 | 1.372e-11 | 4.934e-08 | -0.625 | -0.312 | 1233.5 | 1281.5 | 1266.1 | 773.4 | 632.6 | 695.2 |
E021 | chr5 | 34918051 | 34918136 | TRUE | OK | 21.8 | 0.0114 | 0.1737 | 0.7456 | 0.417 | 0.209 | 28.6 | 16.7 | 19.1 | 23.8 | 22.5 | 20.3 |
E022 | chr5 | 34918231 | 34918297 | TRUE | OK | 17.9 | 0.0486 | 0.888 | 0.9731 | 0.065 | 0.033 | 28.6 | 13.6 | 17.1 | 20.8 | 18.6 | 8.7 |
E023 | chr5 | 34918521 | 34918989 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.5 | 0.0426 | 0.3046 | NA | NA | NA | 3.9 | 3.1 | 2.0 | 2.0 | 4.9 | 4.8 |
J024 | chr5 | 34908948 | 34909257 | TRUE | OK | 385.3 | 0.00377 | 0.03742 | 0.5845 | 0.250 | 0.125 | 417.1 | 446.3 | 351.5 | 389.2 | 322.2 | 385.8 |
J025 | chr5 | 34909356 | 34911553 | TRUE | OK | 370.3 | 0.0013 | 0.01629 | 0.4615 | 0.211 | 0.106 | 385.5 | 430.6 | 364.6 | 357.4 | 318.3 | 365.5 |
J026 | chr5 | 34911812 | 34913469 | TRUE | OK | 233.4 | 0.00602 | 0.003176 | 0.2403 | 0.453 | 0.226 | 232.7 | 206.5 | 247.8 | 273.0 | 209.6 | 231.1 |
J027 | chr5 | 34911812 | 34913926 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.8 | 0.0216 | 0.7675 | NA | NA | NA | 6.9 | 6.3 | 4.0 | 3.0 | 5.9 | 2.9 |
J028 | chr5 | 34911812 | 34914694 | TRUE | OK | 69.1 | 0.00301 | 0.1505 | 0.7349 | 0.247 | 0.123 | 71.0 | 76.1 | 69.5 | 77.4 | 52.9 | 67.7 |
J029 | chr5 | 34913578 | 34913926 | TRUE | OK | 10.8 | 0.0983 | 0.9711 | 0.9931 | 0.019 | 0.010 | 9.9 | 6.3 | 20.1 | 14.9 | 3.9 | 9.7 |
J030 | chr5 | 34913578 | 34914694 | TRUE | OK | 205.0 | 0.0109 | 0.8283 | 0.9573 | 0.060 | 0.030 | 241.6 | 210.6 | 229.6 | 231.3 | 146.9 | 170.2 |
J031 | chr5 | 34914026 | 34914694 | TRUE | OK | 19.1 | 0.0117 | 0.2214 | 0.7652 | 0.404 | 0.202 | 17.7 | 15.6 | 23.2 | 25.8 | 13.7 | 18.4 |
J032 | chr5 | 34914961 | 34915415 | TRUE | OK | 333.2 | 0.0022 | 0.001441 | 0.1615 | 0.329 | 0.165 | 359.9 | 332.6 | 331.4 | 319.7 | 314.3 | 341.3 |
J033 | chr5 | 34915626 | 34918051 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.4 | 0.025 | 0.01346 | NA | NA | NA | 4.9 | 1.0 | 2.0 | 7.9 | 5.9 | 4.8 |
J034 | chr5 | 34918136 | 34918231 | TRUE | OK | 10.8 | 0.0625 | 0.291 | 0.789 | 0.556 | 0.278 | 16.8 | 8.3 | 5.0 | 14.9 | 12.7 | 6.8 |
J035 | chr5 | 34918297 | 34918521 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.15 | 0.2618 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 |
N036 | chr5 | 34897381 | 34908764 | TRUE | OK | 15.2 | 0.0475 | 0.4643 | 0.8441 | 0.288 | 0.144 | 9.9 | 27.1 | 10.1 | 12.9 | 12.7 | 18.4 |
N037 | chr5 | 34897381 | 34908893 | TRUE | OK | 19.9 | 0.00606 | 0.5348 | 0.8671 | 0.182 | 0.091 | 22.7 | 24.0 | 17.1 | 17.9 | 20.6 | 17.4 |
N038 | chr5 | 34915897 | 34918363 | TRUE | OK | 768.9 | 0.00367 | 4.067e-08 | 5.578e-05 | -0.609 | -0.304 | 983.1 | 989.5 | 1007.2 | 611.6 | 472.0 | 550.1 |
N039 | chr5 | 34918475 | 34919839 | TRUE | OK | 576.8 | 0.00174 | 1.859e-11 | 6.404e-08 | -0.592 | -0.296 | 718.8 | 756.0 | 768.5 | 425.9 | 367.2 | 424.4 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000113456.19 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |