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Normalized Counts Table (ENSG00000112984.12)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr5	138178718	138178850	TRUE	OK	171.8	0.0103	0.001906	0.1852	0.597	0.299	123.3	85.5	142.0	198.6	209.6	271.7
E002	chr5	138179111	138179159	TRUE	OK	257.7	0.00584	0.2798	0.785	0.146	0.073	232.7	155.4	250.8	285.9	287.9	333.6
E003	chr5	138179159	138179167	TRUE	OK	453.2	0.00691	0.331	0.8012	0.125	0.063	445.7	269.0	419.0	529.2	491.6	564.6
E004	chr5	138179167	138179168	TRUE	OK	499.2	0.00784	0.5461	0.8706	0.072	0.036	499.9	298.2	477.4	572.8	531.7	614.9
E005	chr5	138179168	138179202	TRUE	OK	1694.9	0.0163	0.5236	0.8633	0.094	0.047	1794.5	924.9	1582.3	1988.6	1740.2	2138.6
E006	chr5	138179202	138179220	FALSE	LOW_COUNTS_INDEP_FILTER	8.8	0.0218	0.8481	NA	NA	NA	3.9	7.3	11.1	7.9	11.8	10.6
E007	chr5	138179220	138179333	TRUE	OK	22.7	0.0111	0.9942	0.9985	-0.001	-0.001	19.7	14.6	25.2	27.8	30.4	18.4
E008	chr5	138179333	138179659	TRUE	OK	88.7	0.00794	0.6531	0.9054	-0.087	-0.043	66.1	81.3	93.7	97.3	97.9	95.7
E009	chr5	138179659	138179845	TRUE	OK	3078.1	0.0133	0.3554	0.8092	0.135	0.067	3144.4	1685.0	2882.7	3543.3	3476.4	3736.8
E010	chr5	138181421	138181448	TRUE	OK	2431.4	0.0151	0.2278	0.7682	0.201	0.100	2490.7	1269.0	2176.6	2780.8	2777.2	3093.9
E011	chr5	138181448	138181502	TRUE	OK	2656.8	0.0121	0.325	0.7995	0.141	0.070	2727.3	1470.2	2438.5	2977.4	3057.3	3269.8
E012	chr5	138181502	138181511	TRUE	OK	2002.9	0.0107	0.42	0.8301	0.104	0.052	2065.7	1138.6	1862.4	2220.9	2277.8	2451.9
E013	chr5	138181608	138181704	TRUE	OK	2760.5	0.0096	0.4366	0.835	0.093	0.046	2802.2	1600.6	2615.8	3132.3	3188.5	3223.4
E014	chr5	138181704	138181728	TRUE	OK	2095.3	0.00834	0.6371	0.9	0.041	0.021	2107.1	1253.3	2064.8	2365.8	2402.2	2378.4
E015	chr5	138181728	138181896	TRUE	OK	33.8	0.0108	0.5829	0.8822	-0.149	-0.074	32.5	25.0	36.3	44.7	27.4	36.7
E016	chr5	138182322	138182425	TRUE	OK	3004.2	0.0106	0.5422	0.8695	0.067	0.034	3094.1	1738.2	2878.6	3438.0	3501.9	3374.3
E017	chr5	138182425	138182461	TRUE	OK	2662.2	0.0101	0.3774	0.8159	0.112	0.056	2763.8	1528.6	2428.4	3071.7	3103.3	3077.4
E018	chr5	138182585	138182747	TRUE	OK	3947.9	0.00711	0.5687	0.8777	0.054	0.027	4064.3	2462.9	3660.2	4517.2	4481.2	4501.6
E019	chr5	138182747	138182773	TRUE	OK	2585.9	0.00466	0.7577	0.9376	0.017	0.009	2652.4	1701.7	2400.2	2917.8	2863.4	2979.8
E020	chr5	138182860	138182990	TRUE	OK	3026.7	0.00533	0.5247	0.8637	0.058	0.029	3053.7	1941.5	2798.1	3490.6	3378.5	3498.0
E021	chr5	138183168	138183363	TRUE	OK	3593.3	0.00328	0.1613	0.7397	0.123	0.061	3526.0	2348.2	3175.8	4134.0	4258.9	4116.8
E022	chr5	138183469	138183581	TRUE	OK	2856.9	0.0018	0.02537	0.5275	0.161	0.080	2732.2	1947.8	2406.3	3229.5	3544.0	3281.4
E023	chr5	138183687	138183756	TRUE	OK	2692.9	0.00226	0.02957	0.5507	0.170	0.085	2571.5	1765.3	2316.6	3021.1	3290.4	3192.5
E024	chr5	138183961	138184105	TRUE	OK	3482.4	0.00265	0.2285	0.7684	0.095	0.047	3435.3	2337.8	3083.1	3909.6	4060.1	4068.4
E025	chr5	138184238	138184404	TRUE	OK	4189.3	0.0011	0.9862	0.9966	-0.007	-0.004	4125.5	3026.0	3884.9	4606.5	4825.9	4666.9
E026	chr5	138184511	138184676	TRUE	OK	4060.2	0.000774	0.9909	0.9978	-0.002	-0.001	3851.3	3022.8	3803.3	4292.8	4802.4	4588.6
E027	chr5	138184806	138184827	TRUE	OK	1888.7	0.00157	0.3715	0.814	-0.065	-0.033	1809.3	1437.9	1835.2	1958.8	2079.0	2212.1
E028	chr5	138184827	138184946	TRUE	OK	3331.1	0.0011	0.7105	0.9231	0.018	0.009	3170.0	2417.0	3112.3	3605.8	3783.9	3897.3
E029	chr5	138185094	138185197	TRUE	OK	3776.2	0.000774	0.07279	0.6671	0.088	0.044	3543.7	2704.8	3380.2	4215.4	4367.6	4445.5
E030	chr5	138185511	138185710	TRUE	OK	4842.3	0.000643	0.1306	0.7237	0.068	0.034	4590.9	3592.2	4260.6	5456.4	5594.6	5559.3
E031	chr5	138185960	138186052	TRUE	OK	3738.8	0.00293	0.3029	0.7923	-0.088	-0.044	3543.7	3227.2	3353.0	3919.5	4198.2	4191.2
E032	chr5	138186293	138186431	TRUE	OK	3742.6	0.00466	0.3052	0.7931	-0.111	-0.055	3550.6	3361.7	3298.7	4003.9	4126.7	4113.9
E033	chr5	138187095	138187243	TRUE	OK	3620.6	0.00661	0.3496	0.8074	-0.120	-0.060	3386.0	3336.7	3186.9	3934.4	3819.2	4060.7
E034	chr5	138187243	138187665	TRUE	OK	4883.2	0.0145	0.225	0.7668	-0.237	-0.118	4477.5	5079.1	4273.6	5024.5	5157.9	5286.7
E035	chr5	138187665	138187723	TRUE	OK	272.2	0.0126	0.1857	0.7511	-0.264	-0.132	262.3	299.3	227.6	266.1	281.1	296.8
J036	chr5	138178850	138179659	FALSE	LOW_COUNTS_INDEP_FILTER	0.5	0.175	0.4439	NA	NA	NA	0.0	1.0	1.0	0.0	0.0	1.0
J037	chr5	138179202	138179659	TRUE	OK	1679.0	0.0171	0.5213	0.8627	0.097	0.049	1782.7	911.3	1562.2	1974.7	1721.6	2121.2
J038	chr5	138179333	138179659	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.586	0.2717	NA	NA	NA	0.0	0.0	2.0	0.0	0.0	0.0
J039	chr5	138179845	138181421	TRUE	OK	2145.4	0.0145	0.1811	0.7494	0.226	0.113	2156.4	1116.8	1910.7	2425.4	2488.3	2774.8
J040	chr5	138181448	138181502	FALSE	LOW_COUNTS_INDEP_FILTER	3.0	0.0651	0.2207	NA	NA	NA	4.9	0.0	6.0	3.0	2.0	1.9
J041	chr5	138181511	138181608	TRUE	OK	1859.6	0.00964	0.4293	0.8327	0.097	0.049	1914.8	1075.0	1724.4	2039.2	2129.0	2275.0
J042	chr5	138181728	138182322	TRUE	OK	1914.1	0.00761	0.5036	0.8569	0.069	0.035	1888.2	1140.7	1875.4	2162.3	2239.6	2178.3
J043	chr5	138182461	138182585	TRUE	OK	2014.7	0.0106	0.4602	0.843	0.090	0.045	2132.7	1157.4	1833.1	2330.1	2277.8	2357.1
J044	chr5	138182773	138182860	TRUE	OK	2129.2	0.00571	0.5904	0.8848	0.047	0.023	2185.0	1348.2	1968.1	2420.4	2358.1	2495.4
J045	chr5	138182990	138183168	TRUE	OK	1776.7	0.0051	0.2007	0.7583	0.137	0.068	1732.4	1094.9	1609.5	2118.6	2016.3	2088.4
J046	chr5	138183363	138183469	TRUE	OK	1735.5	0.00202	0.1382	0.7287	0.114	0.057	1713.7	1231.5	1425.2	1916.1	2127.0	1999.4
J047	chr5	138183581	138183687	TRUE	OK	1966.0	0.00237	0.01025	0.3948	0.209	0.105	1852.7	1245.0	1679.0	2233.8	2466.8	2318.5
J048	chr5	138183756	138183961	TRUE	OK	1847.2	0.00213	0.06141	0.65	0.143	0.072	1771.9	1211.6	1617.6	2061.0	2182.8	2238.2
J049	chr5	138184105	138184238	TRUE	OK	2073.2	0.00254	0.438	0.8355	0.058	0.029	2078.5	1424.4	1831.1	2359.9	2313.1	2432.6
J050	chr5	138184404	138184511	TRUE	OK	2569.8	0.000554	0.5703	0.8782	-0.030	-0.015	2533.1	1889.4	2402.2	2737.1	2974.1	2883.1
J051	chr5	138184676	138184806	TRUE	OK	1711.6	0.00161	0.4055	0.8255	-0.060	-0.030	1614.1	1320.1	1663.9	1749.3	1898.8	2023.6
J052	chr5	138184946	138185094	TRUE	OK	2401.9	0.00112	0.06789	0.6593	0.107	0.053	2253.0	1662.1	2156.5	2632.9	2813.5	2893.7
J053	chr5	138185197	138185511	TRUE	OK	2611.9	0.00112	0.01117	0.4075	0.151	0.075	2425.6	1823.7	2249.1	3032.0	2993.7	3147.1
J054	chr5	138185197	138185960	TRUE	OK	46.9	0.00905	9.325e-06	0.00521	-1.051	-0.526	49.3	50.1	74.5	35.7	40.2	31.9
J055	chr5	138185710	138185960	TRUE	OK	2162.4	0.00116	0.6293	0.8974	0.030	0.015	2101.2	1665.2	1854.3	2336.0	2488.3	2529.2
J056	chr5	138186052	138186293	TRUE	OK	2500.2	0.00528	0.1463	0.7333	-0.172	-0.086	2351.6	2351.3	2274.3	2612.0	2686.2	2725.5
J057	chr5	138186431	138187095	TRUE	OK	2099.0	0.00333	0.5503	0.8719	-0.054	-0.027	1976.0	1824.8	1824.1	2281.4	2309.1	2378.4

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000112984.12
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE