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Normalized Counts Table (ENSG00000108592.17)

binID	chr	start	end	testable	status	baseMean	dispersion	pvalue	padjust	log2FC (yes/no)	log2FCvst (yes/no)	Normalized Coverage Counts
												MCF10A-KI-DMSO-7	MCF10A-KI-DMSO-8	MCF10A-KI-DMSO-9	MCF10A-KI-BYL719-10	MCF10A-KI-BYL719-11	MCF10A-KI-BYL719-12
E001	chr17	63819432	63819994	TRUE	OK	1540.1	0.00966	0.1211	0.7168	-0.269	-0.135	1613.1	2127.1	1615.6	1289.6	1225.1	1370.0
E002	chr17	63820078	63820173	TRUE	OK	1164.1	0.00506	0.05957	0.6473	-0.238	-0.119	1263.1	1517.2	1244.9	969.0	950.9	1039.3
E003	chr17	63820254	63820258	TRUE	OK	774.0	0.00661	0.1137	0.7114	-0.229	-0.115	822.3	1031.2	822.9	617.5	626.7	723.2
E004	chr17	63820258	63820438	TRUE	OK	1189.1	0.00662	0.05667	0.6413	-0.273	-0.137	1279.8	1597.4	1272.1	951.1	966.5	1067.4
E005	chr17	63820838	63820914	TRUE	OK	725.6	0.00409	0.2411	0.7727	-0.138	-0.069	769.1	904.0	773.5	613.5	667.9	625.5
E006	chr17	63820914	63820938	TRUE	OK	685.9	0.00189	0.1249	0.72	-0.132	-0.066	737.5	814.4	757.4	584.8	622.8	598.5
E007	chr17	63820938	63821029	TRUE	OK	24.8	0.0545	0.8638	0.9668	-0.028	-0.014	21.7	26.1	33.2	26.8	31.3	9.7
E008	chr17	63821029	63821115	TRUE	OK	832.4	0.00122	0.07424	0.6692	-0.128	-0.064	902.2	956.2	939.7	702.9	755.0	738.7
E009	chr17	63821353	63821428	TRUE	OK	778.2	0.00158	0.1618	0.74	-0.110	-0.055	876.6	866.5	859.2	636.4	722.7	707.7
E010	chr17	63821428	63821643	TRUE	OK	964.2	0.000915	0.0005505	0.09408	-0.222	-0.111	1120.1	1108.4	1094.9	814.1	796.2	851.8
E011	chr17	63821722	63821843	TRUE	OK	942.3	0.00118	0.05461	0.6366	-0.134	-0.067	1092.5	1043.8	1034.4	803.2	807.9	872.1
E012	chr17	63821843	63821983	TRUE	OK	36.2	0.0117	0.5874	0.8839	-0.138	-0.069	35.5	39.6	47.3	20.8	34.3	39.6
E013	chr17	63821983	63822023	TRUE	OK	675.0	0.00119	0.02007	0.4926	-0.173	-0.086	791.8	733.0	773.5	574.8	564.1	613.0
E014	chr17	63822023	63822168	TRUE	OK	1010.5	0.00261	0.1909	0.7541	-0.122	-0.061	1194.1	1065.7	1128.1	925.3	824.6	925.3
E015	chr17	63822168	63822189	TRUE	OK	32.2	0.0101	0.2256	0.7672	-0.328	-0.164	47.3	34.4	33.2	21.8	31.3	25.1
E016	chr17	63823589	63823816	TRUE	OK	32.8	0.0104	0.9987	0.9996	0.007	0.004	32.5	32.3	41.3	22.8	27.4	40.6
E017	chr17	63823816	63823891	TRUE	OK	832.5	0.00328	0.6863	0.9156	-0.043	-0.021	961.4	834.2	933.7	792.2	690.4	783.1
E018	chr17	63823891	63823952	TRUE	OK	706.3	0.00359	0.9851	0.9963	-0.003	-0.001	813.5	693.4	781.6	681.1	591.5	676.8
E019	chr17	63824083	63824239	TRUE	OK	771.8	0.0037	0.5896	0.8845	0.057	0.029	854.9	730.9	870.2	764.4	673.7	736.7
E020	chr17	63824330	63824386	TRUE	OK	418.8	0.0083	0.7968	0.9489	0.031	0.016	486.1	360.8	495.6	417.0	380.0	373.2
E021	chr17	63824386	63824411	TRUE	OK	389.1	0.00948	0.9565	0.9898	-0.020	-0.010	475.3	338.9	453.3	387.2	344.7	335.5
E022	chr17	63824411	63824595	TRUE	OK	28.3	0.0704	0.7514	0.9356	-0.199	-0.100	38.5	14.6	44.3	20.8	35.3	16.4
E023	chr17	63824636	63824737	TRUE	OK	542.0	0.00764	0.9809	0.9954	-0.008	-0.004	644.8	473.4	640.6	507.3	497.5	488.3
E024	chr17	63824824	63824929	TRUE	OK	518.4	0.00991	0.7046	0.9212	-0.083	-0.041	645.8	445.2	629.5	467.6	461.2	461.2
E025	chr17	63825047	63825163	TRUE	OK	596.0	0.00919	0.736	0.9315	-0.070	-0.035	729.6	523.4	717.1	561.9	527.8	516.3
E026	chr17	63825241	63825342	TRUE	OK	528.1	0.0109	0.6063	0.8901	-0.106	-0.053	636.0	465.1	663.8	508.3	464.2	431.2
E027	chr17	63825342	63825383	TRUE	OK	441.5	0.009	0.6353	0.8995	-0.088	-0.044	518.6	400.4	548.9	413.0	413.3	354.8
E028	chr17	63825383	63825436	TRUE	OK	439.6	0.0101	0.8006	0.9501	0.031	0.016	450.6	388.9	570.1	433.8	421.1	373.2
E029	chr17	63825535	63825590	TRUE	OK	429.3	0.00975	0.9353	0.9847	-0.030	-0.015	426.9	398.3	577.1	413.0	395.6	364.5
E030	chr17	63825590	63825635	TRUE	OK	374.9	0.00975	0.643	0.902	-0.093	-0.046	398.3	348.3	501.6	368.3	325.1	307.5
E031	chr17	63825830	63825926	FALSE	LOW_COUNTS_INDEP_FILTER	6.1	0.0297	0.1056	NA	NA	NA	1.0	6.3	7.1	7.9	6.9	7.7
E032	chr17	63825926	63826055	FALSE	LOW_COUNTS_INDEP_FILTER	9.0	0.0649	0.6823	NA	NA	NA	5.9	5.2	16.1	11.9	8.8	5.8
E033	chr17	63826055	63826071	TRUE	OK	305.2	0.0119	0.7671	0.9404	-0.075	-0.037	336.2	262.8	412.0	299.8	258.5	262.0
E034	chr17	63826071	63826135	TRUE	OK	388.8	0.0106	0.4857	0.8514	-0.134	-0.067	456.5	352.4	501.6	383.2	296.7	342.3
E035	chr17	63826257	63826304	TRUE	OK	343.5	0.0113	0.2736	0.783	-0.208	-0.104	434.8	323.2	425.0	327.6	238.9	311.3
E036	chr17	63826304	63826546	TRUE	OK	21.9	0.0101	0.9189	0.9811	-0.035	-0.017	24.7	16.7	30.2	19.9	17.6	22.2
E037	chr17	63826546	63826566	TRUE	OK	13.4	0.0483	0.7494	0.9351	-0.205	-0.102	21.7	6.3	18.1	13.9	10.8	9.7
E038	chr17	63826566	63826638	TRUE	OK	476.4	0.0158	0.7097	0.9228	-0.105	-0.052	605.4	383.7	602.3	448.7	381.9	436.0
E039	chr17	63826638	63826672	TRUE	OK	429.8	0.0179	0.9009	0.9764	-0.055	-0.028	539.3	332.6	542.9	414.0	342.7	407.0
E040	chr17	63826672	63826698	TRUE	OK	16.7	0.181	0.9024	0.9768	-0.114	-0.057	33.5	7.3	15.1	16.9	23.5	3.9
E041	chr17	63826835	63826844	TRUE	OK	393.0	0.0153	0.8133	0.9535	-0.077	-0.038	490.0	310.7	501.6	360.4	325.1	370.3
E042	chr17	63826844	63826910	TRUE	OK	402.2	0.0151	0.9127	0.9794	-0.051	-0.025	500.9	314.9	506.6	367.3	345.7	378.0
E043	chr17	63826910	63826928	TRUE	OK	288.3	0.015	0.868	0.9679	-0.063	-0.031	369.8	225.2	356.6	257.1	250.7	270.7
E044	chr17	63826928	63826930	TRUE	OK	37.1	0.027	0.8422	0.9612	-0.095	-0.048	54.2	25.0	44.3	36.7	35.3	27.1
E045	chr17	63826930	63827051	TRUE	OK	34.1	0.0483	0.9245	0.9823	-0.089	-0.044	49.3	18.8	45.3	36.7	32.3	22.2
E046	chr17	63827051	63827064	TRUE	OK	182.5	0.0159	0.8205	0.9553	-0.071	-0.036	237.6	142.9	223.6	144.9	160.6	185.6
E047	chr17	63827064	63827070	TRUE	OK	145.0	0.0141	0.8576	0.9652	-0.049	-0.025	179.5	116.8	180.3	110.2	130.2	152.8
E048	chr17	63827070	63827098	TRUE	OK	95.7	0.014	0.9111	0.9789	0.016	0.008	115.4	74.0	118.9	73.5	92.1	100.6
E049	chr17	63827098	63827106	TRUE	OK	33.3	0.017	0.7177	0.9254	-0.118	-0.059	39.4	25.0	47.3	22.8	33.3	31.9
E050	chr17	63827106	63827108	TRUE	OK	31.5	0.0184	0.7283	0.929	-0.120	-0.060	38.5	22.9	44.3	22.8	33.3	27.1
E051	chr17	63827108	63827114	TRUE	OK	33.0	0.014	0.6169	0.8935	-0.151	-0.075	39.4	26.1	46.3	23.8	34.3	28.0
E052	chr17	63827114	63827224	TRUE	OK	46.8	0.0171	0.5313	0.8658	-0.185	-0.092	58.2	37.5	64.5	37.7	49.0	33.8
E053	chr17	63827224	63827246	TRUE	OK	26.7	0.0179	0.4124	0.8278	-0.266	-0.133	35.5	22.9	35.3	27.8	23.5	15.5
E054	chr17	63827246	63827329	TRUE	OK	31.2	0.0273	0.1898	0.7538	-0.468	-0.234	49.3	27.1	39.3	30.8	24.5	16.4
E055	chr17	63827329	63827369	TRUE	OK	21.9	0.0166	0.3903	0.8206	-0.300	-0.150	32.5	15.6	29.2	17.9	17.6	18.4
E056	chr17	63827369	63827477	TRUE	OK	571.2	0.00544	0.03274	0.5643	0.280	0.140	595.5	477.6	618.4	524.2	590.5	620.7
E057	chr17	63827477	63827647	TRUE	OK	1127.2	0.0024	0.0001336	0.03771	0.342	0.171	1103.3	1011.4	1174.4	1066.3	1183.9	1224.0
E058	chr17	63827647	63827663	TRUE	OK	53.4	0.0392	0.5089	0.8589	0.316	0.158	53.2	50.1	52.4	26.8	70.5	67.7
E059	chr17	63829117	63829202	TRUE	OK	29.5	0.0489	0.7743	0.9426	-0.047	-0.023	36.5	31.3	29.2	10.9	30.4	38.7
E060	chr17	63829743	63830012	TRUE	OK	4423.6	0.00121	5.385e-06	0.003351	0.285	0.142	4528.7	4437.8	4554.7	4231.3	4165.9	4623.4
J061	chr17	63819994	63820078	TRUE	OK	781.4	0.00565	0.1438	0.7321	-0.198	-0.099	841.1	1020.8	816.9	678.1	621.8	709.7
J062	chr17	63820173	63820254	TRUE	OK	738.5	0.00642	0.086	0.6847	-0.246	-0.123	787.8	990.6	787.6	584.8	595.4	684.5
J063	chr17	63820438	63820838	TRUE	OK	450.6	0.00518	0.1636	0.7409	-0.190	-0.095	470.3	596.4	477.4	371.3	387.8	400.3
J064	chr17	63820938	63821029	TRUE	OK	623.2	0.00128	0.1869	0.7517	-0.102	-0.051	676.4	725.7	677.9	534.1	574.8	550.1
J065	chr17	63821115	63821353	TRUE	OK	590.3	0.000757	0.3123	0.795	-0.068	-0.034	647.8	644.4	658.7	494.4	546.4	550.1
J066	chr17	63821643	63821722	TRUE	OK	582.9	0.00101	0.02347	0.5155	-0.165	-0.083	692.2	647.5	641.6	500.4	494.5	521.1
J067	chr17	63821843	63821983	TRUE	OK	468.6	0.00103	0.05672	0.6414	-0.146	-0.073	538.4	507.8	538.9	399.1	381.9	445.7
J068	chr17	63821843	63823816	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.128	0.06396	NA	NA	NA	2.0	1.0	1.0	0.0	0.0	0.0
J069	chr17	63822168	63823816	TRUE	OK	581.3	0.00478	0.6487	0.904	-0.057	-0.029	700.1	582.9	631.5	560.9	464.2	548.2
J070	chr17	63823952	63824083	TRUE	OK	487.6	0.00154	0.3537	0.8086	0.078	0.039	546.2	477.6	516.7	470.6	437.7	476.7
J071	chr17	63824239	63824330	TRUE	OK	319.4	0.00375	0.6656	0.9091	0.050	0.025	346.1	297.2	374.7	321.7	280.1	296.8
J072	chr17	63824411	63824636	TRUE	OK	314.6	0.0104	0.6396	0.901	-0.096	-0.048	398.3	278.4	371.7	311.7	261.5	265.9
J073	chr17	63824737	63824824	TRUE	OK	353.7	0.00921	0.8283	0.9573	0.022	0.011	425.0	293.0	419.0	315.7	334.9	334.5
J074	chr17	63824929	63825047	TRUE	OK	353.5	0.00712	0.3978	0.8232	-0.142	-0.071	437.8	320.1	436.1	318.7	301.6	306.5
J075	chr17	63825163	63825241	TRUE	OK	348.4	0.0111	0.6915	0.9172	-0.085	-0.042	432.9	304.5	420.0	349.5	288.9	294.9
J076	chr17	63825436	63825535	TRUE	OK	366.8	0.00704	0.7569	0.9374	0.037	0.018	365.8	338.9	469.4	354.4	351.6	321.0
J077	chr17	63825635	63826055	TRUE	OK	264.9	0.013	0.829	0.9574	-0.061	-0.031	283.0	228.4	362.6	267.1	221.3	227.2
J078	chr17	63826135	63826257	TRUE	OK	272.5	0.0115	0.2605	0.7793	-0.217	-0.108	347.1	258.6	335.4	260.1	185.1	248.5
J079	chr17	63826304	63826546	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.256	0.2764	NA	NA	NA	0.0	1.0	1.0	0.0	0.0	0.0
J080	chr17	63826304	63826566	TRUE	OK	266.0	0.0106	0.1302	0.7235	-0.285	-0.142	355.9	258.6	322.3	245.2	181.2	233.0
J081	chr17	63826672	63826835	TRUE	OK	382.6	0.016	0.8782	0.9706	-0.059	-0.030	469.3	300.3	491.5	355.4	314.3	364.5
J082	chr17	63826698	63826835	FALSE	LOW_COUNTS_INDEP_FILTER	0.3	0.63	0.3231	NA	NA	NA	0.0	0.0	0.0	2.0	0.0	0.0
J083	chr17	63826928	63827051	TRUE	OK	178.9	0.0182	0.8985	0.9757	-0.054	-0.027	233.7	135.6	219.6	143.0	157.7	183.7
J084	chr17	63826928	63827108	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J085	chr17	63827224	63827369	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J086	chr17	63827246	63827369	FALSE	LOW_COUNTS_INDEP_FILTER	0.2	0.55	0.6156	NA	NA	NA	0.0	0.0	1.0	0.0	0.0	0.0
J087	chr17	63827477	63829117	FALSE	ALL_ZERO	0.0	NA	NA	NA	NA	NA	0.0	0.0	0.0	0.0	0.0	0.0
J088	chr17	63829202	63829743	FALSE	LOW_COUNTS_INDEP_FILTER	0.7	0.149	0.4169	NA	NA	NA	1.0	0.0	2.0	0.0	0.0	1.0
N089	chr17	63827514	63828137	TRUE	OK	1033.1	0.00151	4.54e-06	0.002938	0.345	0.172	994.9	931.1	1082.8	998.7	1064.5	1126.4
N090	chr17	63827923	63828137	TRUE	OK	324.5	0.00474	5.162e-05	0.01932	0.539	0.270	319.5	257.6	297.1	345.5	319.2	408.0
N091	chr17	63828209	63829493	TRUE	OK	2450.3	0.00102	2.698e-09	5.111e-06	0.357	0.178	2408.8	2374.3	2438.5	2359.9	2429.6	2690.7
N092	chr17	63829563	63829851	TRUE	OK	3088.9	0.000872	2.858e-08	4.111e-05	0.307	0.153	3099.0	3096.9	3087.1	2967.4	2982.9	3299.8
N093	chr17	63829949	63830132	TRUE	OK	2905.9	0.00216	0.03036	0.5532	0.179	0.090	3049.7	2916.5	3039.8	2749.0	2604.9	3075.5
N094	chr17	63829949	63830270	TRUE	OK	18.6	0.0187	0.518	0.8617	-0.230	-0.115	25.6	14.6	24.2	16.9	9.8	20.3

Color Codes
NO TEST	p > 0.05	p < 0.05	p < 0.005	p < 5e-04	p < 5e-05

Gene ENSG00000108592.17
expr	exprTX	normCt	normCtTX	rExpr	rExprTX	rawCt	rawCtTX
PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT	PLOT
TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE	TABLE