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| binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
| MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
| E001 | chr10 | 44959406 | 44959801 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.2 | 0.0336 | 0.005674 | NA | NA | NA | 5.9 | 2.1 | 1.0 | 6.0 | 6.9 | 9.7 |
| E002 | chr10 | 44959801 | 44959830 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.079 | 0.5504 | NA | NA | NA | 3.0 | 0.0 | 2.0 | 2.0 | 2.0 | 1.9 |
| E003 | chr10 | 44959830 | 44959838 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.8 | 0.079 | 0.5504 | NA | NA | NA | 3.0 | 0.0 | 2.0 | 2.0 | 2.0 | 1.9 |
| E004 | chr10 | 44959838 | 44959866 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.062 | 0.7152 | NA | NA | NA | 3.9 | 1.0 | 2.0 | 2.0 | 2.9 | 1.9 |
| E005 | chr10 | 44970164 | 44970168 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0506 | 0.861 | NA | NA | NA | 4.9 | 2.1 | 2.0 | 2.0 | 2.9 | 2.9 |
| E006 | chr10 | 44970168 | 44970223 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.037 | 0.8882 | NA | NA | NA | 4.9 | 5.2 | 3.0 | 2.0 | 2.9 | 4.8 |
| E007 | chr10 | 44970223 | 44970264 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.0342 | 0.7574 | NA | NA | NA | 4.9 | 5.2 | 4.0 | 2.0 | 2.9 | 4.8 |
| E008 | chr10 | 44970264 | 44971772 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0262 | 0.4721 | NA | NA | NA | 5.9 | 7.3 | 11.1 | 6.9 | 4.9 | 12.6 |
| E009 | chr10 | 44971772 | 44971793 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.7 | 0.0298 | 0.3627 | NA | NA | NA | 5.9 | 5.2 | 7.1 | 4.0 | 2.0 | 3.9 |
| E010 | chr10 | 44971793 | 44971848 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.0 | 0.0327 | 0.02509 | NA | NA | NA | 6.9 | 6.3 | 10.1 | 1.0 | 2.0 | 3.9 |
| E011 | chr10 | 44980891 | 44980927 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.392 | 0.2078 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
| E012 | chr10 | 44981038 | 44982520 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.0 | 0.282 | 0.9571 | NA | NA | NA | 3.0 | 1.0 | 9.1 | 7.9 | 1.0 | 1.9 |
| E013 | chr10 | 44982520 | 44982524 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.7 | 0.0664 | 0.4788 | NA | NA | NA | 5.9 | 6.3 | 13.1 | 7.9 | 2.9 | 3.9 |
| E014 | chr10 | 44982524 | 44982663 | TRUE | OK | 11.1 | 0.0275 | 0.6732 | 0.9113 | -0.210 | -0.105 | 11.8 | 8.3 | 19.1 | 8.9 | 7.8 | 10.6 |
| E015 | chr10 | 44982909 | 44983027 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.7 | 0.224 | 0.2868 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 1.0 |
| E016 | chr10 | 44983027 | 44983084 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.454 | 0.5805 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 |
| E017 | chr10 | 44983084 | 44983869 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.0 | 0.16 | 0.8081 | NA | NA | NA | 2.0 | 0.0 | 1.0 | 2.0 | 1.0 | 0.0 |
| E018 | chr10 | 44983869 | 44983912 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.173 | 0.01992 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 2.9 |
| E019 | chr10 | 44983912 | 44983940 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.8 | 0.173 | 0.01992 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 | 2.9 |
| E020 | chr10 | 44983940 | 44984021 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.0866 | 0.5605 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 2.0 | 2.0 | 1.0 |
| E021 | chr10 | 44984021 | 44984113 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.3 | 0.0193 | 0.3346 | NA | NA | NA | 9.9 | 7.3 | 10.1 | 10.9 | 9.8 | 7.7 |
| E022 | chr10 | 44984113 | 44984812 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.399 | 0.9014 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 |
| E023 | chr10 | 44984812 | 44984875 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.0 | 0.032 | 0.3043 | NA | NA | NA | 13.8 | 5.2 | 8.1 | 4.0 | 4.9 | 5.8 |
| E024 | chr10 | 44984875 | 44984970 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.6 | 0.0205 | 0.2667 | NA | NA | NA | 14.8 | 10.4 | 8.1 | 6.9 | 4.9 | 6.8 |
| E025 | chr10 | 44989273 | 44989332 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0255 | 0.854 | NA | NA | NA | 11.8 | 8.3 | 5.0 | 6.9 | 5.9 | 5.8 |
| E026 | chr10 | 44989332 | 44989374 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.6 | 0.0338 | 0.9923 | NA | NA | NA | 9.9 | 7.3 | 5.0 | 8.9 | 2.9 | 5.8 |
| E027 | chr10 | 44989374 | 44989375 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.0366 | 0.7851 | NA | NA | NA | 4.9 | 4.2 | 4.0 | 6.0 | 2.0 | 3.9 |
| E028 | chr10 | 44989616 | 44989669 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| E029 | chr10 | 44989669 | 44989721 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.8 | 0.026 | 0.3183 | NA | NA | NA | 5.9 | 6.3 | 7.1 | 9.9 | 3.9 | 7.7 |
| E030 | chr10 | 44990537 | 44990828 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.397 | 0.8813 | NA | NA | NA | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
| E031 | chr10 | 44990947 | 44991055 | TRUE | OK | 10.4 | 0.0151 | 0.1142 | 0.7118 | 0.695 | 0.347 | 7.9 | 9.4 | 11.1 | 9.9 | 10.8 | 13.5 |
| E032 | chr10 | 44991055 | 44991069 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.3 | 0.0228 | 0.241 | NA | NA | NA | 6.9 | 5.2 | 11.1 | 6.9 | 9.8 | 9.7 |
| E033 | chr10 | 44991069 | 44991343 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.757 | 0.2662 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 |
| E034 | chr10 | 44991904 | 44991960 | TRUE | OK | 10.4 | 0.0165 | 0.1786 | 0.7483 | 0.590 | 0.295 | 8.9 | 10.4 | 10.1 | 9.9 | 12.7 | 10.6 |
| E035 | chr10 | 44991960 | 44991970 | FALSE | LOW_COUNTS_INDEP_FILTER | 9.1 | 0.0186 | 0.06735 | NA | NA | NA | 6.9 | 7.3 | 9.1 | 9.9 | 11.8 | 9.7 |
| E036 | chr10 | 44991970 | 44992002 | TRUE | OK | 11.9 | 0.0158 | 0.005354 | 0.3046 | 1.185 | 0.592 | 8.9 | 9.4 | 9.1 | 10.9 | 16.6 | 16.4 |
| E037 | chr10 | 44993268 | 44993430 | TRUE | OK | 15.4 | 0.02 | 0.673 | 0.9113 | 0.164 | 0.082 | 11.8 | 15.6 | 22.2 | 12.9 | 14.7 | 15.5 |
| E038 | chr10 | 44993430 | 44994707 | TRUE | OK | 43.6 | 0.0112 | 0.09267 | 0.6911 | -0.509 | -0.254 | 50.3 | 59.4 | 48.3 | 29.8 | 32.3 | 41.6 |
| E039 | chr10 | 44994707 | 44995891 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.5 | 0.089 | 0.0427 | NA | NA | NA | 2.0 | 3.1 | 3.0 | 0.0 | 0.0 | 1.0 |
| J040 | chr10 | 44959866 | 44970164 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.3 | 0.0429 | 0.7115 | NA | NA | NA | 3.9 | 1.0 | 2.0 | 2.0 | 2.9 | 1.9 |
| J041 | chr10 | 44970264 | 44971772 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.0 | 0.031 | 0.1606 | NA | NA | NA | 3.9 | 5.2 | 4.0 | 2.0 | 2.0 | 1.0 |
| J042 | chr10 | 44971848 | 44980891 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J043 | chr10 | 44971848 | 44982520 | FALSE | LOW_COUNTS_INDEP_FILTER | 2.8 | 0.0357 | 0.08593 | NA | NA | NA | 3.0 | 4.2 | 6.0 | 1.0 | 1.0 | 1.9 |
| J044 | chr10 | 44971848 | 44982524 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.852 | 0.4072 | NA | NA | NA | 0.0 | 0.0 | 3.0 | 0.0 | 0.0 | 0.0 |
| J045 | chr10 | 44980927 | 44982520 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.261 | 0.1872 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 1.0 |
| J046 | chr10 | 44982663 | 44982909 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J047 | chr10 | 44982663 | 44983869 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.5 | 0.696 | 0.2494 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.9 |
| J048 | chr10 | 44982663 | 44983940 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.2 | 0.0706 | 0.9178 | NA | NA | NA | 1.0 | 2.1 | 1.0 | 1.0 | 1.0 | 1.0 |
| J049 | chr10 | 44982663 | 44984021 | FALSE | LOW_COUNTS_INDEP_FILTER | 3.8 | 0.0316 | 0.1536 | NA | NA | NA | 3.0 | 1.0 | 5.0 | 6.0 | 3.9 | 3.9 |
| J050 | chr10 | 44982663 | 44984812 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.3 | 0.625 | 0.433 | NA | NA | NA | 0.0 | 0.0 | 2.0 | 0.0 | 0.0 | 0.0 |
| J051 | chr10 | 44984113 | 44984812 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.1 | 0.0198 | 0.973 | NA | NA | NA | 7.9 | 4.2 | 5.0 | 4.0 | 4.9 | 4.8 |
| J052 | chr10 | 44984970 | 44989273 | FALSE | LOW_COUNTS_INDEP_FILTER | 6.0 | 0.0197 | 0.9656 | NA | NA | NA | 9.9 | 6.3 | 4.0 | 5.0 | 4.9 | 5.8 |
| J053 | chr10 | 44989375 | 44989616 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| J054 | chr10 | 44989375 | 44989669 | FALSE | LOW_COUNTS_INDEP_FILTER | 4.2 | 0.0256 | 0.7757 | NA | NA | NA | 4.9 | 4.2 | 4.0 | 6.0 | 2.0 | 3.9 |
| J055 | chr10 | 44989721 | 44990947 | FALSE | LOW_COUNTS_INDEP_FILTER | 5.6 | 0.0204 | 0.3912 | NA | NA | NA | 3.9 | 6.3 | 6.0 | 6.9 | 2.9 | 7.7 |
| J056 | chr10 | 44990828 | 44990947 | FALSE | LOW_COUNTS_INDEP_FILTER | 0.2 | 0.564 | 0.475 | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.0 |
| J057 | chr10 | 44991069 | 44991904 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.3 | 0.0184 | 0.3557 | NA | NA | NA | 6.9 | 5.2 | 9.1 | 6.0 | 9.8 | 6.8 |
| J058 | chr10 | 44992002 | 44993268 | FALSE | LOW_COUNTS_INDEP_FILTER | 8.1 | 0.0145 | 0.1736 | NA | NA | NA | 6.9 | 7.3 | 8.1 | 6.9 | 10.8 | 8.7 |
| N059 | chr10 | 44978055 | 44978617 | TRUE | OK | 18.7 | 0.0162 | 1.746e-11 | 6.073e-08 | 2.652 | 1.325 | 9.9 | 7.3 | 8.1 | 34.7 | 23.5 | 29.0 |
| Color Codes | |||||
|---|---|---|---|---|---|
| NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
| Gene ENSG00000107551.21 | |||||||
|---|---|---|---|---|---|---|---|
| expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
| PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
| TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |