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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (yes/no) | log2FCvst (yes/no) | Normalized Coverage Counts | |||||
MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | MCF10A-KI-BYL719-10 | MCF10A-KI-BYL719-11 | MCF10A-KI-BYL719-12 | ||||||||||||
E001 | chr17 | 78214185 | 78214252 | TRUE | OK | 13.6 | 0.0133 | 0.5437 | 0.8699 | 0.231 | 0.115 | 11.8 | 17.7 | 12.1 | 17.9 | 8.8 | 13.5 |
E002 | chr17 | 78214252 | 78214262 | TRUE | OK | 83.3 | 0.00495 | 0.01861 | 0.4807 | 0.417 | 0.208 | 66.1 | 86.5 | 85.6 | 95.3 | 75.4 | 90.9 |
E003 | chr17 | 78214262 | 78214263 | TRUE | OK | 93.1 | 0.00817 | 0.02495 | 0.5248 | 0.444 | 0.222 | 72.0 | 97.0 | 94.7 | 107.2 | 79.3 | 108.3 |
E004 | chr17 | 78214263 | 78214279 | TRUE | OK | 406.5 | 0.00195 | 4.865e-05 | 0.01853 | 0.391 | 0.195 | 380.6 | 425.4 | 370.7 | 451.7 | 390.7 | 419.6 |
E005 | chr17 | 78214279 | 78214316 | TRUE | OK | 1178.5 | 0.00575 | 0.02039 | 0.4954 | 0.316 | 0.158 | 1210.8 | 1187.7 | 1124.1 | 1245.0 | 1097.8 | 1205.6 |
E006 | chr17 | 78214316 | 78214364 | TRUE | OK | 1495.5 | 0.0053 | 0.0152 | 0.4497 | 0.317 | 0.158 | 1506.6 | 1521.3 | 1453.4 | 1561.7 | 1404.3 | 1525.7 |
E007 | chr17 | 78214364 | 78214384 | TRUE | OK | 1632.9 | 0.00599 | 0.0335 | 0.5678 | 0.294 | 0.147 | 1624.9 | 1661.1 | 1645.8 | 1682.8 | 1521.8 | 1661.0 |
E008 | chr17 | 78214384 | 78214427 | TRUE | OK | 1759.5 | 0.00578 | 0.02967 | 0.551 | 0.295 | 0.148 | 1740.3 | 1794.5 | 1782.8 | 1816.8 | 1656.0 | 1766.4 |
E009 | chr17 | 78214679 | 78214789 | TRUE | OK | 2319.7 | 0.00666 | 0.05085 | 0.6272 | 0.283 | 0.142 | 2369.4 | 2372.2 | 2323.7 | 2308.2 | 2201.4 | 2343.6 |
E010 | chr17 | 78214789 | 78214793 | FALSE | LOW_COUNTS_INDEP_FILTER | 7.4 | 0.118 | 0.5099 | NA | NA | NA | 3.9 | 12.5 | 11.1 | 6.0 | 9.8 | 1.0 |
E011 | chr17 | 78214793 | 78215099 | TRUE | OK | 16.0 | 0.0291 | 0.9463 | 0.9873 | -0.012 | -0.006 | 15.8 | 22.9 | 14.1 | 10.9 | 22.5 | 9.7 |
E012 | chr17 | 78215965 | 78216034 | TRUE | OK | 163.1 | 0.0201 | 0.744 | 0.9337 | 0.088 | 0.044 | 193.3 | 140.8 | 187.3 | 147.9 | 141.0 | 168.2 |
E013 | chr17 | 78216034 | 78216066 | TRUE | OK | 11.5 | 0.0503 | 0.5578 | 0.874 | -0.323 | -0.162 | 6.9 | 14.6 | 20.1 | 6.9 | 7.8 | 12.6 |
E014 | chr17 | 78216066 | 78216426 | TRUE | OK | 31.2 | 0.0586 | 0.8947 | 0.9748 | -0.008 | -0.004 | 14.8 | 40.7 | 47.3 | 20.8 | 33.3 | 30.0 |
E015 | chr17 | 78216426 | 78216663 | TRUE | OK | 36.3 | 0.0278 | 0.8638 | 0.9669 | -0.066 | -0.033 | 25.6 | 48.0 | 48.3 | 22.8 | 39.2 | 33.8 |
E016 | chr17 | 78216663 | 78216781 | TRUE | OK | 2472.9 | 0.0048 | 0.4617 | 0.8433 | 0.099 | 0.049 | 2610.0 | 2750.7 | 2563.4 | 2357.9 | 2190.6 | 2364.9 |
E017 | chr17 | 78222827 | 78222979 | TRUE | OK | 62.9 | 0.0202 | 0.2406 | 0.7726 | 0.326 | 0.163 | 79.9 | 51.1 | 54.4 | 60.6 | 61.7 | 69.6 |
E018 | chr17 | 78222979 | 78222992 | TRUE | OK | 45.2 | 0.0158 | 0.06858 | 0.6605 | 0.499 | 0.249 | 53.2 | 38.6 | 33.2 | 42.7 | 52.9 | 50.3 |
E019 | chr17 | 78223464 | 78223554 | TRUE | OK | 3018.8 | 0.00152 | 0.9324 | 0.984 | 0.013 | 0.006 | 3159.2 | 3654.7 | 3080.1 | 2857.2 | 2631.3 | 2730.3 |
E020 | chr17 | 78223554 | 78223856 | TRUE | OK | 4152.8 | 0.00208 | 0.1205 | 0.7163 | -0.118 | -0.059 | 4480.4 | 5345.0 | 4172.9 | 3952.3 | 3415.7 | 3550.2 |
E021 | chr17 | 78223856 | 78225635 | TRUE | OK | 7851.1 | 0.00427 | 0.2764 | 0.7836 | -0.135 | -0.067 | 7858.5 | 10695.2 | 7700.2 | 7216.6 | 6854.0 | 6782.4 |
E022 | chr17 | 78225635 | 78225636 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J023 | chr17 | 78214427 | 78214679 | TRUE | OK | 1653.5 | 0.00541 | 0.02361 | 0.5165 | 0.298 | 0.149 | 1632.8 | 1681.9 | 1675.0 | 1694.7 | 1577.6 | 1659.1 |
J024 | chr17 | 78214789 | 78215965 | TRUE | OK | 88.1 | 0.027 | 0.4054 | 0.8255 | 0.248 | 0.124 | 106.5 | 64.6 | 95.7 | 92.3 | 79.3 | 89.9 |
J025 | chr17 | 78214789 | 78216663 | TRUE | OK | 1082.8 | 0.00841 | 0.09478 | 0.6936 | 0.275 | 0.138 | 1129.0 | 1062.5 | 1084.8 | 1077.2 | 1000.8 | 1142.8 |
J026 | chr17 | 78214789 | 78222827 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.0557 | 0.334 | NA | NA | NA | 2.0 | 2.1 | 3.0 | 2.0 | 0.0 | 1.0 |
J027 | chr17 | 78214789 | 78223464 | TRUE | OK | 100.2 | 0.00297 | 0.7914 | 0.9474 | -0.034 | -0.017 | 108.5 | 122.0 | 102.7 | 88.4 | 77.4 | 102.5 |
J028 | chr17 | 78214793 | 78215965 | FALSE | ALL_ZERO | 0.0 | NA | NA | NA | NA | NA | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
J029 | chr17 | 78216034 | 78216663 | TRUE | OK | 113.1 | 0.026 | 0.7953 | 0.9486 | 0.079 | 0.039 | 141.0 | 92.8 | 128.9 | 103.3 | 93.0 | 119.9 |
J030 | chr17 | 78216066 | 78216663 | FALSE | LOW_COUNTS_INDEP_FILTER | 1.7 | 0.228 | 0.2307 | NA | NA | NA | 1.0 | 1.0 | 6.0 | 0.0 | 1.0 | 1.0 |
J031 | chr17 | 78216781 | 78222827 | TRUE | OK | 20.2 | 0.025 | 0.8498 | 0.9632 | -0.054 | -0.027 | 27.6 | 20.9 | 19.1 | 12.9 | 15.7 | 25.1 |
J032 | chr17 | 78216781 | 78223464 | TRUE | OK | 1773.1 | 0.00235 | 0.7166 | 0.925 | 0.040 | 0.020 | 1856.7 | 2066.7 | 1843.2 | 1656.0 | 1560.0 | 1656.2 |
J033 | chr17 | 78222992 | 78223464 | TRUE | OK | 36.1 | 0.00781 | 0.01958 | 0.4883 | 0.578 | 0.289 | 37.5 | 33.4 | 26.2 | 32.8 | 42.1 | 44.5 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000089685.15 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |