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binID | chr | start | end | testable | status | baseMean | dispersion | pvalue | padjust | log2FC (mutant/control) | log2FCvst (mutant/control) | Raw Counts | |||||
MCF10A-parental-DMSO-1 | MCF10A-parental-DMSO-2 | MCF10A-parental-DMSO-3 | MCF10A-KI-DMSO-7 | MCF10A-KI-DMSO-8 | MCF10A-KI-DMSO-9 | ||||||||||||
E001 | chr6 | 35468400 | 35468407 | TRUE | OK | 72.3 | 0.00364 | 0.16 | 0.696 | 0.233 | 0.116 | 79.0 | 69.0 | 58.0 | 67.0 | 82.0 | 81.0 |
E002 | chr6 | 35468407 | 35468419 | TRUE | OK | 2372.5 | 0.00354 | 0.1943 | 0.7196 | -0.144 | -0.072 | 3078.0 | 2385.0 | 2251.0 | 2228.0 | 2428.0 | 1991.0 |
E003 | chr6 | 35468419 | 35468439 | TRUE | OK | 9827.7 | 0.00685 | 0.3622 | 0.7959 | -0.145 | -0.072 | 13296.0 | 9808.0 | 8778.0 | 9150.0 | 9987.0 | 8607.0 |
E004 | chr6 | 35468439 | 35468798 | TRUE | OK | 651.8 | 0.00698 | 0.2355 | 0.743 | 0.157 | 0.079 | 744.0 | 631.0 | 540.0 | 696.0 | 664.0 | 664.0 |
E005 | chr6 | 35468798 | 35468873 | TRUE | OK | 19006.1 | 0.00578 | 0.62 | 0.8904 | -0.079 | -0.039 | 24382.0 | 18909.0 | 16852.0 | 17506.0 | 20383.0 | 17041.0 |
E006 | chr6 | 35468873 | 35468946 | TRUE | OK | 765.8 | 0.0125 | 0.8452 | 0.9606 | 0.014 | 0.007 | 713.0 | 781.0 | 826.0 | 648.0 | 810.0 | 802.0 |
E007 | chr6 | 35468946 | 35469027 | TRUE | OK | 24557.7 | 0.0054 | 0.7742 | 0.9403 | -0.049 | -0.024 | 30783.0 | 24642.0 | 21590.0 | 22339.0 | 27005.0 | 22206.0 |
E008 | chr6 | 35469027 | 35469285 | TRUE | OK | 1038.8 | 0.00737 | 0.01548 | 0.3502 | 0.338 | 0.169 | 1256.0 | 884.0 | 743.0 | 1044.0 | 1225.0 | 1138.0 |
E009 | chr6 | 35469285 | 35469380 | TRUE | OK | 887.3 | 0.00414 | 4.959e-19 | 1.773e-15 | 1.013 | 0.507 | 729.0 | 637.0 | 481.0 | 1123.0 | 1261.0 | 1098.0 |
E010 | chr6 | 35469380 | 35469529 | TRUE | OK | 33002.8 | 0.00668 | 0.07094 | 0.5848 | -0.268 | -0.133 | 41027.0 | 33667.0 | 30686.0 | 29770.0 | 35583.0 | 28736.0 |
E011 | chr6 | 35470178 | 35470351 | TRUE | OK | 26121.7 | 0.00146 | 0.4455 | 0.8279 | -0.050 | -0.025 | 31000.0 | 26607.0 | 23926.0 | 23660.0 | 29992.0 | 22434.0 |
E012 | chr6 | 35470579 | 35470640 | TRUE | OK | 14711.6 | 0.00385 | 0.2192 | 0.7349 | 0.149 | 0.074 | 16620.0 | 14714.0 | 12614.0 | 13084.0 | 18971.0 | 12633.0 |
E013 | chr6 | 35470640 | 35470780 | TRUE | OK | 10842.8 | 0.00533 | 0.1498 | 0.6881 | 0.206 | 0.103 | 11775.0 | 10564.0 | 9338.0 | 9459.0 | 14716.0 | 9360.0 |
E014 | chr6 | 35470780 | 35470785 | TRUE | OK | 49.4 | 0.00768 | 0.3488 | 0.7908 | 0.196 | 0.098 | 68.0 | 40.0 | 36.0 | 51.0 | 61.0 | 44.0 |
J015 | chr6 | 35468439 | 35468798 | TRUE | OK | 9670.0 | 0.00651 | 0.3519 | 0.792 | -0.144 | -0.072 | 13057.0 | 9667.0 | 8640.0 | 8977.0 | 9841.0 | 8482.0 |
J016 | chr6 | 35468873 | 35468946 | TRUE | OK | 18759.7 | 0.00544 | 0.5745 | 0.8747 | -0.085 | -0.042 | 24094.0 | 18699.0 | 16647.0 | 17231.0 | 20140.0 | 16772.0 |
J017 | chr6 | 35469027 | 35469380 | TRUE | OK | 20329.0 | 0.0029 | 0.2376 | 0.744 | -0.114 | -0.057 | 25749.0 | 20685.0 | 18209.0 | 17981.0 | 22431.0 | 17928.0 |
J018 | chr6 | 35469285 | 35469380 | TRUE | OK | 98.5 | 0.00973 | 0.875 | 0.9691 | 0.007 | 0.003 | 140.0 | 90.0 | 78.0 | 99.0 | 98.0 | 95.0 |
J019 | chr6 | 35469529 | 35470178 | TRUE | OK | 14775.5 | 0.00294 | 0.01732 | 0.3664 | -0.228 | -0.114 | 18654.0 | 15373.0 | 14264.0 | 13418.0 | 15322.0 | 12295.0 |
J020 | chr6 | 35470351 | 35470579 | TRUE | OK | 13209.0 | 0.00181 | 0.3377 | 0.7864 | 0.079 | 0.040 | 15217.0 | 13395.0 | 11502.0 | 11944.0 | 16257.0 | 11333.0 |
N021 | chr6 | 35468439 | 35468596 | TRUE | OK | 10.0 | 0.0799 | 0.7512 | 0.9333 | 0.238 | 0.119 | 16.0 | 6.0 | 7.0 | 13.0 | 16.0 | 3.0 |
N022 | chr6 | 35468439 | 35468801 | TRUE | OK | 81.9 | 0.0114 | 0.8663 | 0.9667 | -0.063 | -0.031 | 118.0 | 75.0 | 69.0 | 83.0 | 75.0 | 79.0 |
N023 | chr6 | 35468596 | 35468798 | TRUE | OK | 36.9 | 0.0222 | 0.467 | 0.8358 | 0.213 | 0.106 | 42.0 | 31.0 | 33.0 | 43.0 | 29.0 | 45.0 |
Color Codes | |||||
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NO TEST | p > 0.05 | p < 0.05 | p < 0.005 | p < 5e-04 | p < 5e-05 |
Gene ENSG00000198755.11 | |||||||
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expr | exprTX | normCt | normCtTX | rExpr | rExprTX | rawCt | rawCtTX |
PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT | PLOT |
TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE | TABLE |